Hirundo rustica (Barn swallow): 120758558
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Entry
120758558 CDS
T09369
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X5
KO
K10357
myosin V
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120758558 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120758558 (MYO5A)
04131 Membrane trafficking [BR:
hrt04131
]
120758558 (MYO5A)
03029 Mitochondrial biogenesis [BR:
hrt03029
]
120758558 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hrt04812
]
120758558 (MYO5A)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120758558 (MYO5A)
mRNA cycle factors
P-body specific factors
120758558 (MYO5A)
Membrane trafficking [BR:
hrt04131
]
Others
Actin-binding proteins
Myosins
120758558 (MYO5A)
Mitochondrial biogenesis [BR:
hrt03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120758558 (MYO5A)
Cytoskeleton proteins [BR:
hrt04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120758558 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
HTH_17
AAA_16
AAA_22
Myosin_N
Motif
Other DBs
NCBI-GeneID:
120758558
NCBI-ProteinID:
XP_039932867
LinkDB
All DBs
Position
13:8203749..8302409
Genome browser
AA seq
1877 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGVD
DAKEMMNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCTVPPKHEPLAIF
CDLMGVEYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVN
KALHATVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDSWAQKLYNTHLNKCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKFKLLPELFQDEEKVLS
PTSATPSGRVPLSRTPIKPAKARPGQASKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQRDVL
GDRKQTCKNVLEKLIQDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW
LMRKKYMRMRKAAITIQRHVRGYQARCYAKFLRRTRAAITIQKFQRMYVVRKRYRCMRDA
TIALQALLRGYMVRNKYQMMLREHKSVVIQKHVRGWLARRRYRRTLRAVVYLQCCYRRMM
AKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNSLEITYSTE
TEKLRSDVERLRMSEEEAKNATNRVISLQEEIAKLRKELHQTQSEKKSIEEWADKYKHET
EQLVSELKEQNSLLKTEKEELNRRIHDQAKEITESMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKDEMNLMVSIPKPGHKRTDSTHSSNESEYTFSSEITEAEDLPLRM
EEPSEKKATLDMSLFLKLQKRVSELEQEKQSLQDELDRKEEQALRAKAKEEERPPMRGAE
LEYESLKRQELESENKKLKNELNELQKALTETRAPEVTAPGAPAYRVLLDQLTSVSEELE
VRKEEVLILRSQLVSQKEAIQPKHTMTDATILLEDVQKMKDKGEIAQAYIGLKETNRQSP
QDYHVLNEDGELWLAYEGLKQANRLLESQLQSQKKSHENELESLRGEIQSLKEENNRQQQ
LLAQNLQLPPEARIEASLQHEITRLTNENLFCEELYAADPKKYQLYRISLYKRMIDLMEQ
LEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLE
YKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTIN
GIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQNEHCLTNFDLAEY
RQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGT
YTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLLRKDMCSWSKGMQ
IRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNALTTAQ
IVKVLNLYTPVNEFEERVLVSFIRTIQVRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLAL
ETIQIPASLGLGFISRV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccgagctctacaccaagtatgccagggtttggatccctgatccagaggag
gtctggaagtcagcagaacttctcaaagattataaacctggagataaagtcctccagctt
cgacttgaagagggcaaggacctagagtattgcctggatccgaagacgaaggagctgccg
cccttgcggaaccccgacatcctggttggtgaaaatgacctcacagcgctcagttatctc
cacgagcctgccgtcctgcacaacctcaaagttcgcttcatagactccaaactcatctat
acctattgtggtattgttttagtggccataaacccttatgaacagctgcctatctatggc
gaagatatcatcaatgcctacagtggccaaaacatgggggatatggatccacatatcttt
gcagtggctgaagaagcatacaagcagatggccagagacgagcgaaaccagtcgatcatc
gtcagtggggaatctggagctgggaagactgtctctgctaagtatgccatgaggtacttt
gccacggtcagtggatctgccagtgaagccaatgttgaggagaaggttttggcctccaac
cccatcatggagtctattggaaatgccaaaactaccaggaatgacaacagcagtcgcttt
ggtaaatacatcgaaattggttttgataagagatatcgaatcattggtgctaacatgaga
acttacctcttggaaaaatcaagagtggtgttccaggcagaagaggagagaaattaccac
atcttttaccagctttgtgcctctgcagcattgcccgagtttaaaactctacgattaggg
aatgcaaattactttcactatacgaagcaaggtggaagccctgtgattgatggtgttgat
gatgctaaggaaatgatgaacaccaggcaggcctgcactttgctagggattagtgattcc
taccagatgggaatttttcgaatccttgctggcatccttcacttgggcaatgtggagttt
gcatctcgggattctgacagctgcactgttcctcccaagcatgaaccccttgccattttc
tgtgacctcatgggtgtggagtatgaggagatggcccactggctttgccataggaagctc
gccactgccactgaaacctacatcaagccaatttccaaacttcatgccatcaatgccaga
gacgcacttgccaaacatatctacgctaatctctttaactggattgtagatcatgtgaac
aaagcccttcatgctactgtaaaacagcattctttcatcggggtgttggacatctatgga
tttgaaacgttcgaaatcaacagctttgaacagttctgtatcaactatgccaatgaaaaa
ctgcagcagcagttcaatatgcatgtctttaagctggaacaagaagaatatatgaaggaa
caaataccgtggaccttgattgatttctacgacaatcagccttgcatcaacctcatagag
gccaaaatgggagttctggatctgttggatgaggagtgcaagatgccaaaaggctcagat
gactcttgggcccaaaaactatacaatactcatttgaataaatgtgctctctttgaaaaa
ccacggatgtcaaacaaggcctttattatcaagcactttgctgacaaggtggaatatcaa
tgtgaaggctttttggaaaagaataaagacacagtttatgaagaacaaattaaggtccta
aaatcaagtaagtttaagctgctaccagagttattccaggatgaggagaaggtcctcagt
cccacatcagcaaccccttcagggcgcgtgcctctgtctcgaacgccgatcaaacctgcc
aaggccaggccagggcaggccagcaaggagcataagaaaactgtggggcatcagtttcgg
aactctcttcatctgctgatggaaaccctgaatgctacaactccacactacgtgcgctgt
attaagccaaatgacttcaagtttccattcacgtttgatgaaaagcgggcagtgcagcag
ctgagagcctgtggtgtcctggagaccatccgaatcagtgccgccggcttcccctccagg
tggacgtaccaggagttcttcagccgttaccgggttctgatgaagcagagagacgtcctc
ggtgaccgaaagcagacgtgtaaaaatgtcctggagaagctgattcaggacaaggataag
taccagtttggtaagacaaaaatatttttccgggctggtcaagtagcctacctggaaaaa
ataagggcagataagttgagagctgcctgtatccgcatccaaaagacgatccgaggctgg
ctgatgagaaagaagtacatgcgtatgaggaaggctgccatcaccatccagagacacgtc
agagggtaccaggcacgatgctatgccaagttcctgcggagaacacgagctgccatcacc
attcagaagttccagcgcatgtacgtggtccgcaagagataccggtgcatgcgagatgct
actattgctcttcaggctctgctaagaggttacatggtcaggaacaagtaccaaatgatg
ctgcgggagcacaagtccgtggtcatccagaagcacgtgaggggctggctggcccggcgg
cgctaccgccgcacgctgcgggccgtcgtgtacctgcagtgctgctaccgccgcatgatg
gccaagagggagctcaagaagctgaagatagaagctcgctccgtggagcgctacaagaag
cttcacattggcttggagaacaagatcatgcagctgcagcggaagatcgatgagcagaac
aaagagtacaaatctctgctggagaagatgaacagcctggagatcacgtacagtacggag
acggagaagctgcggagcgacgtggagaggcttcggatgagtgaggaggaggccaagaat
gccaccaaccgcgtcatcagcctccaggaggagattgccaagctccgcaaggagctgcac
cagactcagtcggagaagaagagcattgaggaatgggcagacaaatacaaacatgaaact
gagcagctggtgtcagagctgaaagagcagaactcattactgaaaacagaaaaggaggag
ctgaaccgccgcatccatgaccaggcgaaggaaataacagagtcaatggaaaagaaattg
gtggaggagacaaagcagctggagctggacctgaatgatgaacggttacggtaccagaac
ctgctgaatgagttcagccgcctggaggagcgctacgatgacctcaaggatgaaatgaac
ctgatggtgagcatccctaagcctgggcacaaaaggacggactcaactcacagcagcaat
gaatctgaatatactttcagctctgagatcacagaagcagaagacttaccgctaaggatg
gaggagcctagtgagaaaaaagccacgctggacatgtctctgttcctcaagctgcagaaa
cgggtttcagaactggagcaagaaaagcaatccctgcaggatgaactggacagaaaggaa
gaacaggctctccgtgctaaagctaaggaggaagaaagacctcccatgagaggtgcagag
ttggagtatgagtcactcaagcgtcaagaacttgaatctgagaataaaaaactgaagaac
gagttgaatgagctgcagaaggccctcacagagacacgagctccagaggtgactgctcct
ggtgccccagcatacagagtcctcctggaccagctgacctcggtcagcgaagagcttgaa
gtacgcaaggaagaagttctcatcctcaggtctcagcttgttagccagaaagaggcaatt
cagcccaagcatacaatgacagatgctacaatcctcttggaggatgtacagaagatgaaa
gacaaaggagaaatagcacaggcatatattggactgaaggagacaaacaggcaatctccc
caggactatcatgtgctgaatgaggacggagaactttggctggcttatgaagggttaaaa
caagccaacaggctgctggagtctcagcttcagtcgcagaagaagagccacgagaacgag
ctggaatccctgcgaggtgagatccagagtctgaaggaagaaaacaatcggcagcagcag
ctcctggcccagaacctgcagctgcctccagaggctcgcattgaagccagtctgcagcat
gagatcacccggctgactaatgagaacctgttttgtgaggagttgtatgcagctgatccc
aagaagtatcagttgtaccggatttccctttacaagcggatgattgatttaatggagcag
ctggaaaagcaggacaaaactgttcgcaagctaaagaagcagctgaaagtatttgctaag
aagatcggtgaactcgaagtgggccagatggagaacatatcacctggacaaatcattgat
gaacctattcgtccagttaacattccacggaaagaaaaggatttccaaggaatgttggaa
tataagaaggaggatgaacaaaaactggtcaagaatcttattttagagctgaaaccacgt
ggggtagctgtcaacctgattccaggactaccagcatatattttgttcatgtgtgtgcgc
catgcagattaccttaatgatgaccagaaagtgcggtcgttgttgacttccactatcaat
ggcatcaaaaaagtgttaaagaaaagaggagatgactttgaaacagtgtccttctggctg
tcgaacacctgccgatttttgcactgtttgaagcagtacagtggggaagaggggtttatg
aagcataatacacctcgtcaaaatgaacactgcctcactaattttgatttagctgaatac
agacaagtactgagtgacttggctattcagatctaccaacaactcgtccgggtgttggaa
aatattctgcagccaatgattgtttcaggaatgctggagcacgagaccatccaaggtgtc
tcaggggtgaaaccgacagggctgcggaagagaacctccagcattgctgatgaaggcacc
tacaccttggactccatcatccggcagctgaactccttccactcggtgatgtgccagcat
ggaatggacccagagctgatcaaacaggtggtcaagcagatgttctacatcattggggcc
gtaacgctcaataaccttctgctgcgcaaggacatgtgctcctggagcaaaggaatgcag
ataaggtacaatgtgagtcaactggaggaatggctacgtgataaaaatttgatgaatagt
ggggctaaggaaaccctggaacccctcatccaggctgcacagttgttacaagtgaaaaag
aagacagatgaagatgcagaagccatttgttcaatgtgcaatgcactgactactgcccag
attgtaaaagttctgaatttgtacactccagttaatgagtttgaagagagagtcttggtg
tcatttatacgtacaatacaggtgcgtctgcgagacaggaaggactctcctcagttgctc
atggatgctaaacacatcttccctgttacttttccgtttaatccatcctctctggcttta
gaaaccattcagatcccagccagcttgggcctgggcttcatatcacgtgtctga
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integrated database retrieval system
