Hirundo rustica (Barn swallow): 120758588
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Entry
120758588 CDS
T09369
Symbol
DMXL2
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120758588 (DMXL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120758588 (DMXL2)
Membrane trafficking [BR:
hrt04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120758588 (DMXL2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
120758588 (DMXL2)
RAVE complex
120758588 (DMXL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
120758588
NCBI-ProteinID:
XP_039932950
LinkDB
All DBs
Position
13:complement(8776418..8823102)
Genome browser
AA seq
3068 aa
AA seq
DB search
MHLHQVLTGAVNPGDNGYSVGSVQDTPFTAYGSGCDIVILANDFECVQIIPGAKHGNIQV
SCVECSQRQGRIAASYGNAVCIFEPLGINSHKRNCQLKCQWLKTGQFFLSSMTYNLAWDP
QGNRLLTATDFLQLWAPPSDDILEEDEDDANNQIKDDKVLPVLNDWKCVWQCKTATSVHL
MSWSPDGEYFATAGKDDCLLKVWYPMTGWKSSLLPQENEEKKKCSEDVQFSFVYLAHPRA
VTGFSWRNISKYMPRGLVCNVLLTSCLDGICRLWAETLLPEDTLLGEQICETTTSSISST
ISQSGKQKDTIQHALETIHHLKNMRKGQRRSSVLVTHTDVLPDQQGTHEVQRHISHQANA
LGHFHIAASINPNTDIPSVLAGTAFNIDEGSGGFVVHWLNNKEFHFTSSIEVFMQHLRQI
SEQQLEQDFDIEAEEEEETEEKEKGLRMKLDHDLSIDRESETGTGTGSSEHEDGEREGSP
KTSLLAGPRLPLPTVLLDRKIDLLLTEWNRNPDMLFTIHPVDGTFLVWHVKYLDEYTPGI
FRQVQVSFSSRIPVAFPSGDASSLSKNIMMYACPVFVKDSSRAAQQKTMDFSDNTLSNKR
PRFAQDSANVNIISPVVMMISKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHL
NDLACHSVLPLLLTSSHHNALLTPESDASWDSDRINRMMDPIKHKRGSSKQQLKNAATRT
FHDPNAIYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTY
CNSASACFVASDGKNLRLYQAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTARPGCII
ELDAITNKCGSNTQLLHVFQEDFILGYKPHKEDVEGKETEIFFQPSQGYRPPPFSEKFYL
VVIEKDSSGCSVLQMWHLHLKSVQACLAKPTEASSADNKLSVPEQKTVDSSPDVSPGISP
IPRSSSIANLQTASKLILSSRLVYSQPLDLPVGVEVVRATPSAGHLSSSSIYPVCLAPYL
IVTSCSDNRVRFWRCTVETDLNSKAEEKETYHWRKWPLMNDEGEDNSSTVSIVGRPVAVS
CSYTGRLAVAYKQPIQHNGFVSKEFSMHVCILECESTGGSEWVLEQTIHLDDLVKVGSVL
DSRVSVDSNLFVYSKSDAFLNKDKYLVPSIKHLVHLDWVSKEDGSHILTVGVGANIFMYG
RLSGIVTDQTSSKEGVAVITLPLGGSIKQGVKSKWVLLRSIDLVSSVDGTPSLPVSLSWV
RDGILVVGMDCEMHVYAQWKHAVKFGNGESDVFTSEDSTTQDPFKTSAVVKKTSVIDGAG
VVDDVFGTPTVIQDGGLFEAAHVLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIA
GEVAIVKDTEAGEGTGPKRHLSRTISVSGSTAKDTITAGKDGTRDYTEIDSIPPLPLYAL
LAADQDATYVAEDTSKIPQGSEDHTKRKTEDQYSDLFQIQPVTTEDFIDFEPEKRESKSK
VINLSQYGPTYFGREHASVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDENRDK
NYSGRDTLDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGLSTCHFAWAFHSEAEEELI
NMIPAIQKGDPQWSELRALGIGWWVRNINTLRRCIEKVAKAAFQRNNDALDAALFYLAMK
KKAVVWGLFRSQHDEKMTAFFSHNFNEDRWRKAALKNAFALLGKQRFEQSAAFFLLAGSL
KDAIEVCLEKMEDIQLAMVIARLYESEFETSVTYTSILYEKILGCQKDGTGFSCTKLHSD
PFLRSIAYWIMKDYTRALDTLLEQTPKDDDENPVIVKSCNPVVFSFYNYLRTHPLLIRRY
FSSPEGTLATLGLKTEKSFVDKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKIRKK
STVDGEKDSSSPSIQADVSDSKALKDGAGSSDIDWSKPISTSFALESTAESSAQFDWSQP
AVKFDDEPLTLDWGEDKNGSDEEDKDVGIMMKKSDSKSEDERTSDTSMAQTPHGEVSEAG
DTEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIAAMHEICNHD
AGDKDYCKTYTKVNGDLLDPEDIMDKPDIGSYERHQIERRRLQAKREHAERRKWWLQKNQ
ALLRVFLSYCSLHGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASI
ASTKTVIANPVLYLNNHIHDILYTIVQMKSPPHPNIEDVKVYTLHSLAASLSASIYQALC
DSHSYSSQTEANQFTGMVYQGLLLSDRRRLRTESIEEHATPNSSPAQWPGVSSLINLLSS
AQDEDQPKLNILLCEAVVAVYLSLLIHALATNSCNELFRLAAHPLNSRMWAAVFGGGVKL
LVKPRRQSENIPAPPLPSEEMDKHRRRFNMRMLVPGRPVKDSNVPPPVPAERPSYKEKFI
PPELSMWDYFMAKPFLPLSDSGVIYDSDESIHSDEEEDDAFLSDVQIQEHTDANSYSWAL
LHLTMVKLVLHNIKNFFPIAGLEFTDLPVTSPLGIAVIKNLEHWEQILQDRMDQFEGPPP
NYINTYPSDLGVGAGPAILRNKAMIEPENTPFKSKDYSALPAKRLWHFLVKQELLQETFI
RYIFTKKRKQSESVEDRVEQVKQNCVAEDHKNKVEADLGYPGGKAKIIHKESDMIMAFAV
NQANSNEIVLASTHDVQELDISALLAAQSFIWIGEEYDRESKSSDDVDFRGSTTTLAPST
APSFGVSQIQPSPSMPWLGTGQTSTGAGVLIKRNLNNVKRMASHPVHQYYLTGAQDGSVR
MFEWTRPQQLVCFQQAGNARVTRMYFNAQGNKCGVADGEGFLSIWQVNQTTSNPKPYLSW
QCHSKTTSDFAFITSSSLVATSGQSNDNRNVCLWDTLVSSGNSLIHAFTCHDHGATVLQY
APKHQLLISGGRKGYICIFDIRQRQILFTFQAHESAVKALALDPSEDYFVTGSAEGNMKV
WRLTGYNLIHSFKNEHAKQSLFRNIGAGVTQIETVQGNRIFSCGADGTLKMRVLPNAFNV
PSGIFDIL
NT seq
9207 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaggtgctgaccggcgccgtgaaccccggcgacaacgggtactccgtg
ggcagcgtgcaggacacccccttcacggcatatggctctggttgtgacattgttattctg
gcaaatgactttgaatgtgtgcagattattcccggtgctaaacatggaaacatccaggtc
agttgcgtggagtgctcccagcggcaaggcaggattgcagcgtcatatggaaatgctgtt
tgcatttttgaaccgcttggtataaattcccataaaagaaattgccagctgaagtgtcag
tggctaaaaactgggcaattcttcctcagttctatgacttacaacttggcctgggatcct
caaggtaacaggttattgacagcaacagactttttgcaattgtgggcccctccatctgat
gacattctagaggaagatgaagatgatgccaacaatcagatcaaggatgataaagttctc
ccagtcctaaatgactggaaatgtgtctggcagtgcaagactgcaacatcagtacatttg
atgtcatggtctcctgatggtgaatattttgcaacagctgggaaggatgactgcctctta
aaggtttggtatcctatgactggttggaagtcatccctcctgccccaagagaatgaagaa
aagaaaaaatgctcagaagatgtgcagttttcctttgtttatttggcacatccccgagca
gtgacagggttttcctggcggaacatcagcaaatacatgcccagggggttggtctgtaat
gtgttactcacgtcctgcctggatggcatctgtcgactgtgggcagagacgctgttacct
gaagatactctcctgggggagcagatctgtgaaaccaccacttccagcatcagcagcacc
atctctcagtctggaaagcaaaaggacactatacaacatgcactggagacaattcatcat
ttgaaaaatatgagaaaaggacaaaggaggtcttcagttcttgttacccacacggatgta
ctgccagatcagcagggcactcatgaagttcagcgtcacatttcccatcaagcaaatgca
cttggtcacttccacatagcagcaagcatcaaccctaatacagatattccttcggtgttg
gctggaaccgcttttaatatagatgaaggaagtggaggctttgttgtccactggctgaat
aataaagaatttcattttacatcctctattgaagtattcatgcagcatctaagacaaatt
tcggaacaacaactagaacaagattttgatattgaagctgaagaggaggaagaaacagaa
gaaaaagagaaaggcttacgtatgaagttagatcatgatttgtctatagacagagaatca
gagacagggactggtacaggctcttcagaacatgaagatggagaaagagagggaagcccc
aaaacatctttgctagcgggcccacgcctgcctcttccgactgttttgttggaccggaaa
atcgacttgctcctaacagagtggaacaggaatccagatatgctttttactatccatcct
gttgatggtacctttctggtgtggcacgtgaagtatttagatgaatacactccaggcatc
tttcgacaagttcaggtttcattttcttctaggattcctgttgcatttccatctggagat
gctagctcccttagcaaaaatattatgatgtacgcctgccctgtctttgtaaaagacagc
agcagggctgcccagcagaaaacaatggacttttcagataatactctatcaaataaacga
ccaaggtttgcccaggacagtgcaaatgtgaatataatttctcctgtggtaatgatgatt
tccaagcatatagatggctctctaaaccagtgggcagttacttttgctgataaatcagct
ttcactactgtgctaactgtatcccataagtttaggtactgtgggcaccgctttcacctc
aatgatctggcctgccattctgttttaccattgctgctgacgtcttctcaccacaacgct
ctgttaactcccgagtcagacgcttcctgggactccgacaggataaacaggatgatggat
cctatcaaacataagagaggttcttctaagcagcaacttaaaaatgcagcaacccgtaca
ttccatgacccaaatgcaatctatagtgagctgattctgtggcgagtagaccccatagga
cctttatcctacactggaggagtgtctgagttggctcgaattaactctcttcacacctct
gctttctctaatgtagcctggcttccaacactaattcccagctactgccttggtacctat
tgcaactctgctagtgcttgctttgttgcatcagatggaaaaaacctgaggctctatcaa
gctgttgtagatgcacgaaaacttctggatgaattatctgaccctgaatcatctaaactt
attggggaggtgtttaatattgtgagccaacaatctactgctcgaccaggatgtatcatt
gagctcgatgcaataactaacaaatgtggctcaaacacacaattgcttcatgtcttccaa
gaagacttcattttgggatacaaaccacataaggaagatgtggaagggaaggaaactgag
atatttttccagccatcacaagggtatcgtccaccacctttctcagagaagttctacctg
gtagtaattgaaaaagacagtagtggctgttctgttcttcaaatgtggcatcttcatctc
aaatctgtgcaagcctgtttagcaaaaccaactgaagcatcttcagcagataataaactt
agtgtacctgagcagaagactgtggattcttctccagatgtatcacctggcataagtccc
ataccacgatcttcatcaattgctaaccttcagactgctagtaaactcattctgagctcc
agacttgtgtatagccaacccctggatcttcctgttggtgtggaagtagtaagagcaact
ccttcagcaggtcacttgagttcctcatcaatataccctgtctgcctcgcgccttatttg
atagtaacgtcctgttcagacaacagagtgcggttctggagatgcaccgtagagacagac
ctcaacagcaaagctgaagagaaggagacgtaccactggagaaaatggcctttaatgaac
gatgagggggaagacaacagcagtacagtgagcatagtaggaaggccagttgctgttagc
tgttcttacacaggacgtcttgcagtagcatacaaacaacccatacagcataatgggttt
gtttccaaagaattttccatgcatgtttgtatacttgaatgtgagtctactggaggatca
gagtgggttttggaacagacaattcatctggatgatttagttaaggttggaagtgtactt
gactcaagggtcagcgtggatagtaatttatttgtttacagtaagtcagatgcttttttg
aataaggacaaatacctggtgcccagtatcaagcatttggtgcatttggactgggtttca
aaagaagatggttcacatatactgacagttggagtgggtgccaacatcttcatgtacgga
aggctttcagggatcgtaacagatcaaaccagcagcaaagagggagtagctgtcatcacc
ctgccactaggagggagcataaaacaaggtgtgaagtcaaagtgggtgttgctgaggtcc
attgatttggtttcatctgtggatggcactccttccctgcctgtgtctctgtcctgggtg
agagatggaatattggtggtgggaatggactgcgaaatgcacgtttatgcccagtggaaa
cacgcggtcaagtttggcaatggagagagtgatgtctttacttctgaagactcaacaaca
caagatccattcaaaacaagtgcagtagtgaagaagaccagtgtaattgatggggcaggg
gttgtggatgatgtttttggcactccaactgtaattcaggatgggggcctctttgaagct
gctcatgttctttcacctactctgccccagtatcacccaacccagttgttagaactgatg
gacctgggtaaagttcgccgagccaaagccattctgtcgcatttagttaagtgcattgca
ggagaagttgcaatagtcaaggacacagaagctggagaagggactggtcctaagcgccat
ctttctcgcaccatcagtgtgagtggcagtactgccaaggacaccatcactgctgggaaa
gacggtacccgagactacacagagatagactcaattcccccactgccactgtatgcactg
cttgctgcagatcaggatgccacctatgttgctgaagacacttctaaaatacctcagggc
tctgaagaccatacaaagagaaaaacagaggatcagtactcagatctgttccagattcaa
cctgttacaactgaagactttatagattttgagcctgaaaagagggagagcaaatccaaa
gttattaatctgtcacagtacgggccaacttactttggccgagagcatgccagtgtcctt
tcgagccacctgatgcattcaagtctgccaggcctcactcgactggagcagatgttcctt
gtagctttggcagacactgtggccacaacaagcactgaactagatgagaacagagataag
aattactcaggaagagataccttagatgaatgtggcctccggtacctgctggccatgcgc
ttgcacacctgcctgctgacatccctgcctcccctgtaccgcgtgcagctgctccaccaa
ggcctgtcaacttgccattttgcatgggcttttcattctgaggctgaggaggagttgatc
aatatgattcctgctatccagaagggagacccacagtggtctgaactgagagctctgggc
attggttggtgggtcaggaatatcaacactctccgaaggtgcattgagaaggttgcaaaa
gctgcgttccagaggaacaatgatgccttagatgctgcacttttttaccttgctatgaag
aaaaaagcagtggtgtggggtctgtttaggtcccagcatgatgaaaagatgactgccttt
ttcagccacaacttcaatgaagaccgatggcgtaaagctgctttaaaaaatgcttttgct
ttgttgggaaaacaacgttttgagcagtcagctgcatttttcttgctagcaggttcacta
aaagatgctatagaggtgtgccttgagaaaatggaggacatccagttggccatggtcatt
gctcgtttgtatgaatcagagtttgaaacctctgtcacgtacacctccattctctatgag
aagattctgggttgccagaaggatggaactggattcagctgtactaagttgcattctgat
ccatttctgagaagtattgcatattggataatgaaagattacacacgagcactggataca
ttattggaacaaacacccaaagatgatgatgaaaacccagttatcgtcaaatcctgcaat
cctgtggtgttcagtttttacaactaccttcggacccaccctttgctcatccgaagatac
ttcagctcaccagaaggaactctggccaccttaggtctaaaaactgagaaaagctttgtt
gataaaattaatcttatagaaagaaaattattcttcactactgcaaatgctcattttaaa
gttggctgccctgtactagcccttgaagtcctttccaaaattccaaaaataagaaaaaag
tctactgtagatggagaaaaagattcatccagtccttcaatccaggctgatgtctcagat
tccaaagccctaaaggatggtgctggaagcagtgatatagactggtcaaagcccatttca
acttcctttgctttggagagtactgctgaatcctcagcacaatttgactggagtcaacca
gcagtaaaatttgatgatgagccgcttactcttgactggggtgaagacaaaaatgggtca
gatgaagaagacaaggatgttgggataatgatgaaaaagtctgattctaagagtgaagat
gagaggacctcagacaccagtatggctcaaacaccacatggggaggtttctgaggcagga
gacactgaggttgatgttattgccgagcaactgaagttcagagcctgtttgaaaatcctt
atgactgaactgaggactttggccacaggttatgaagtggatggaggaaagctcagattt
cagctgtacaactggctggagaaagagattgctgctatgcatgaaatatgcaaccacgat
gcaggggacaaagactactgtaaaacatacaccaaagtaaatggggatctgcttgatccc
gaggatattatggataagccagacattggctcgtacgaacggcaccagatcgaaagacgg
aggttacaggcaaagcgagaacatgctgagagacggaagtggtggctgcagaagaaccaa
gctcttctcagggtttttctcagttactgtagtcttcatggggcacaaggtggaggttta
gcatctgtaaggatggagctgaagttcttgctgcaggagtcacagcaggaaactactgta
aagcaacttcagtctccacttccactacccacaacactaccactgctttctgcaagcata
gcatccacaaaaactgtgatagctaatcctgtgctgtacttaaacaaccacatccatgat
atactttacactattgtgcagatgaaatcgccaccacatcctaatattgaagatgtcaag
gtgtacacacttcattctttagcagcttcactttctgcatccatttatcaagcactatgt
gacagccacagctacagcagtcaaacagaagcaaatcagtttactgggatggtttatcaa
ggactgcttttgagcgatcgacgcagactgaggacagaaagcattgaagagcatgcaact
ccaaattcatctcctgctcagtggcccggtgtgagttcgcttatcaacctgttaagttca
gctcaggacgaagaccagccgaagctgaacatcctgctgtgcgaagccgttgtagccgtg
tacctgagtctcctgatccacgcgctggccaccaactcgtgcaacgagctgttccggctg
gcggcgcacccgctcaacagccgcatgtgggctgctgtctttggggggggcgtgaagctg
ctcgtgaaaccccgccggcagtccgagaacatcccagcacctcctcttccatcagaagaa
atggataaacaccgccgtcggtttaacatgagaatgctggtgccaggaagaccagtaaaa
gacagcaatgtaccaccacctgtacctgcagaaagaccctcttacaaagaaaagttcatt
cctccagaactcagcatgtgggactattttatggcaaagccctttctgcctttgtcagac
agtggtgttatatacgattccgatgaaagcattcacagtgatgaggaggaggacgacgct
ttcctctccgacgtgcagatccaggaacacacagatgccaattcttacagctgggctctt
ctacatctgacaatggtaaaattagttctgcacaacattaagaacttctttcccattgct
ggtctggaattcactgatctgcctgtaacatctccattgggcattgctgtaataaaaaat
ttagaacactgggaacagattcttcaagatagaatggaccagtttgaaggcccgcctcca
aactacatcaatacttaccccagtgaccttggtgtaggggcaggaccagctattctccgc
aataaagccatgattgaacctgaaaacacaccattcaaatcgaaggattactcagctctt
ccagcaaaaaggctctggcattttcttgtgaagcaagaacttcttcaggagactttcata
agatatatattcacaaagaaaagaaagcagagtgagtctgtagaagatcgtgtggagcag
gtcaaacaaaactgcgtagcagaagatcacaaaaacaaggttgaagcagatcttggctac
cctggaggaaaagcaaaaatcattcacaaagaatcagatatgataatggcatttgcagtt
aaccaggcaaacagcaatgaaattgttttggcatctacacatgatgttcaagaacttgat
atttcagctctactggctgctcagtcatttatatggattggggaagaatatgacagagag
tctaaaagttctgatgatgttgacttccgtggttctaccacaacactggctccttcaact
gcaccatcatttggagtgagccagatccagccatctccatccatgccctggctaggcact
gggcaaaccagcactggagctggtgtgctgattaaaagaaatctgaataacgtcaagaga
atggcttcacatccagtccatcagtattatcttacaggagcacaagatggaagtgtccga
atgtttgagtggaccaggccacagcagctggtgtgcttccagcaggctgggaatgccagg
gtgaccaggatgtatttcaatgcccagggaaataagtgtggtgttgctgatggtgaaggc
tttctaagtatttggcaagtaaaccaaaccacctcaaatcctaagccctacctgagttgg
cagtgccacagtaaaaccacaagtgactttgcatttataacctcttcaagtctagttgct
acatcgggacaatccaatgataacagaaatgtgtgcctctgggacaccttggtttcatct
ggtaacagtcttatacatgccttcacttgtcatgaccacggtgccacagttcttcagtat
gcacccaagcatcaactgctcatttctggaggtaggaagggatacatctgcatctttgac
atcagacagaggcaaatccttttcaccttccaagcacacgagtcagctgttaaggccctt
gcactggatccttccgaggactattttgttacgggctcagccgaaggcaacatgaaggtg
tggagactgactggctacaatttaattcattcatttaaaaatgaacatgctaagcaatcc
cttttcagaaatattggtgctggtgtcacccagattgaaactgtgcagggcaatcgtatc
ttctcctgtggagcagatggcacgctgaaaatgagggttcttcccaatgctttcaatgta
ccttcaggcatttttgacattctgtag
DBGET
integrated database retrieval system
