Hirundo rustica (Barn swallow): 120758616
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Entry
120758616 CDS
T09369
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120758616 (CHD2)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120758616 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
120758616
NCBI-ProteinID:
XP_039933002
LinkDB
All DBs
Position
13:14376004..14462678
Genome browser
AA seq
1829 aa
AA seq
DB search
MMRNKDKSQGEEGSVHSNASSHSASEEASGSDSASQSESEQGSESNSSSESSESQSESES
ESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKDEA
SSESENESPKRRRQKQLKRKIKWKREISAGEEDEDGGEQGTSGESEPEPKKIKARRPVQR
RTVAKPGVKKPHKIQRGKRKKPDSSEDDDDDEDDETPKRQTRRRAAKNVSYKEDDDFETD
SDDLIEMTGEGADEQQDNSETIEKVLDIRLGKKGAIGASTTVYVTEANGNPSADFDPEKD
EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLGKVSPEDVE
YFNCQQELASELNKQYQIVERVIAVKTSKSATGHSDFPANSRKTSSNDPEYLCKWMGLPY
AECSWEDEALISKKFQHCIDSFNSRNNSKTIPTRDCKVLKQRPRFVALKKQPSYIGGENL
ELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPL
STLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALITTYEILLKD
KTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF
IMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMS
ALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGLET
LQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIK
GEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH
RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGRSNSNP
FNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQFK
VANFATMEEEETELDERSQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQ
TNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFTDAEIRRFIK
AYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENPAEGKG
PGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPSDPEERKKYRLTCRVKAAHFDVDW
GVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQTRVDYLLKLL
KKDLDKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNQSEEGEVKED
GLDKSPVKKKQKKKENKENKEKQTSSKKEKESDKEKKKTKEKKEKPKGGEAKSGSKGKRS
QGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLTVQEQLEH
TRNCLLKIGDRISECLKAYTDQDHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQ
EEEEQKKKEDMSSMKKPFRPEPSGSSRDSVMSQSHVPHNPHSQKIHMPPSHTQQQMHGHP
RDNYGHPNKRHFSNTDRGDWQRDRKFNYGGNSNQMWGGERHHQYEQHWYKDHHYGDRRSR
GDPHRSSGNYRPNNLSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSDDFRPQNYHQQ
DFRRMSDHRPPMGYHGQGPSDHYRSFHTDKLGDYKQPLPPSHPAVSDPRSPPSQKSPHDS
KSPLDHRSPLDRSLEQKNNPDYNWSIRKA
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagtccacagcaatgcatcg
agtcactcggcatccgaagaagcctctggctctgactctgcaagccagtctgaaagtgag
cagggcagcgagtcaaacagcagctccgagtcctctgagagtcagtctgagtccgaaagt
gaatcaacgggttccaaatcccagcagacccctcctgaaaccaaagaaaagcctgcctct
aagaaggaaaggatagcagatgttaaaaagatgtgggaagaatatcctgatgtttatggg
gttaggaggtcaaaccgaagcagacaagaaccgtcacgatttaatataaaagatgaggca
agtagcgaatctgaaaatgagagcccaaaaagaagacgccagaagcagctgaaaagaaaa
attaaatggaaaagagagatctctgctggagaagaggatgaagatggaggggagcaaggc
accagtggagaaagtgagcctgaaccgaagaaaattaaagcaagaagacctgtccaaagg
agaacagtggccaaacccggtgttaaaaagccccacaaaatccagcgtgggaagaggaag
aaaccagactcatctgaagatgacgacgacgacgaagacgatgagacccccaagagacaa
actcggcgaagagcagccaagaatgtcagctacaaagaggatgatgattttgagacggat
tctgatgacctgatagagatgactggggaaggagctgatgagcaacaagacaacagtgaa
actattgagaaggtcttggacatcaggcttggaaagaagggagccattggagcttccacc
acagtgtacgtgaccgaggccaacggcaaccccagcgccgacttcgaccccgagaaggac
gagggggaggttcagtacctgatcaagtggaagggctggtcatacatccacagcacgtgg
gagagcgaggagtccttgcagcagcagaaagtgaagggcctgaaaaagctcgagaacttc
aagaaaaaagaggaggagatcaagcaatggctgggcaaggtatcacctgaagatgtagaa
tatttcaactgccaacaagaactggcttcagagctgaacaaacagtatcaaatagtggag
agggtaattgctgtgaagaccagcaagtctgccacgggacattcagatttcccagcaaac
agtcgcaaaacatcctcgaatgaccctgaatacctgtgtaagtggatggggctgccctat
gctgagtgcagctgggaagatgaggctctgatcagcaagaaatttcagcactgcatcgac
agcttcaacagtcgtaacaactccaagacgattcccacccgggactgcaaggtgttgaag
cagaggccgaggtttgttgccttgaagaagcagccctcgtacattggtggggagaacctg
gagctgcgggattaccagctggagggcctcaactggctcgctcactcctggtgcaagaac
aacagcgtgatcctggctgatgagatggggctgggcaagacgattcagacgatatcattc
ctgtcatacctgttccatcagcaccagctgtacggccctttcctggtggtcgtgcccctg
tccaccctcacctcatggcagagggagtttgaagtgtgggcgcccgagattaacgtggtg
gtttacattggagacctcatgagcaggaacatgatacgtgaatatgagtggatccattct
cagtctaaaagattgaaattcaatgcgcttatcacaacgtacgagatcctcctgaaggat
aagactgttttgggaagcattaactgggccttcctaggcgtggacgaagcccatcggttg
aaaaatgacgactccttgctgtacaaaacattgattgatttcaagtccaaccacaggctg
ctgatcaccggcaccccgcttcaaaactcactcaaggagctctggtccctgctgcacttc
atcatgccagagaagtttgagttctgggaagattttgaggaggatcacgggaaaggtaga
gagaatggctaccagagccttcacaaagtcctggagccgtttctcctgcgcagagtgaag
aaggatgtggagaaatctttgccagccaaagtggagcagatcctccgggtggaaatgtct
gctctgcagaaacagtattacaagtggattttgacaagaaactacaaagctctttcaaag
ggaacaaggggaagcacatctggtttcctgaatattgtgatggaattgaaaaagtgctgc
aaccattgctatcttatcaaacctcccgaggaaaatgagagagagaatggccttgagacc
ctgcagtctttgatcaggagcagtggaaagctgattctcttggacaagctgctgaccagg
ctgcgggagagaggcaacagggtgctgatcttctcccagatggtgaggatgctggacatc
ttggcagagtacctgactatcaaacactacccttttcagcgcttggacggctcgatcaag
ggggagatccgaaagcaggcgctggatcacttcaacgccgacggctccgaggacttctgt
ttcttgttgtcaacacgagctggagggctgggaattaatttggcctctgctgatactgtt
gttatctttgactcggactggaacccccaaaatgatcttcaggctcaggcccgagctcat
cggattggacaaaagaagcaggtgaatatttaccgcctggtcaccaaggggacagtggag
gaggagatcattgagagagccaagaagaaaatggtgctggatcatttggttatccagcgt
atggacaccactggccggactgttctggacaacaactctgggagatccaactcaaatccc
ttcaacaaagaggagctgacagctattttgaagtttggagccgaagatcttttcaaggag
cttgaaggggaagagtcagagcctcaggagatggacatcgatgagattctgcgtctggct
gaaacacgggagaatgaggtgtccaccagtgccaccgacgagctgctctcacagttcaag
gttgccaactttgcaaccatggaggaggaagagacagagctggatgagcggtcccagaag
gactgggatgatatcattccagaagagcagaggaaaaaggtggaggaggaagaaaggcag
aaagaattggaggaaatctacatgctgcctcgaatccggagctcaactaaaaaggctcag
acaaatgacagtgaatctgatgcagagaccaagagaaggcttcagagatcatctggatca
gaaagcgagactgacgataccgatgatgagaagagaccgaagcgcaggggacgccctcgg
agtgttagaaaagacactgtggaaggatttactgatgctgaaatcaggaggtttatcaag
gcttacaagaagtttggattgcctcttgaacggctggagtgcattgcccgggatgctgag
ctggtggataaatccgtggctgacctgaagaggttaggggagctcatccacaacagctgt
gtgtcagcaatgcaggaatatgaggagcagctgaaggaaaatccagcagaagggaaagga
cctggaaagagacgaggtcctaccatcaagatttctggtgtccaagtcaatgtgaaatcc
atcatccagcacgaagaggagtttgaaatgctgcacaaatccattccctcggacccagag
gaaaggaagaagtaccgcctgacgtgccgtgtcaaagctgctcattttgatgtagactgg
ggagtggaggaggattctcgcttgttagtgggaatttacgagcatggttatggaaactgg
gagctaattaaaacagatccggagttgaagttatctgataagatcctacctgttgagaca
gataagaaacctcagggaaaacagcttcagacccgagttgattatctactgaaactgctg
aaaaaagatctggacaagaaagaaaacatgaaagatggggaagagggcaagctaaagaag
aggaaaccgcgagtaaagaaagagaacaaagctcccaaagtcaaggatgagcatgggaat
gagctctcctctcctcggcactcagacaaccagtcagaagaaggtgaagtcaaggaggat
ggcttggacaagagcccagtgaaaaagaaacagaagaagaaagagaacaaagagaacaag
gaaaagcagacgtcctctaagaaagaaaaggaaagcgataaagagaaaaagaagacaaaa
gaaaagaaagagaagcctaaaggtggcgaggccaaatctggaagtaaagggaagagatct
caaggtcccgtccacatcactgcagggagcgagccaatccccattggagaagatgaggat
gatgatctggaccaagaaacattcagcatatgcaaggaaaggatgagaccagtcaaaaaa
gcactgaagcaacttgataagcccgataagggactgacagttcaagaacagctggagcac
acgcgcaactgcctcctaaaaattggtgatcgcatctctgagtgccttaaagcctacact
gaccaggatcacatcaagctgtggagaaggaacctgtggatatttgtgtcaaaattcaca
gaatttgatgccagaaaactacacaaactctacaagatggctcataagaagagatcacag
gaggaggaggagcagaagaagaaggaggacatgtccagcatgaagaagccgttccgcccg
gagccctcgggctccagccgcgattccgtgatgtcccagtctcacgtgcctcacaatcct
cattcccagaagatccacatgcccccttcccacacccagcagcagatgcacgggcaccca
cgggacaactacggccatccaaacaagagacatttcagcaacacagaccgaggagactgg
cagagggatcggaagttcaactacggtggcaacagcaaccagatgtggggcggggagcgg
caccaccagtacgagcagcactggtacaaggaccaccactacggggaccggcggtcgcgg
ggggatccccaccgcagctccggcaactacagaccaaacaacctgtcccgcaagaggccc
tacgagcagtacaacagcgacagagaccacagaggccaccgggactactacgacaggcac
caccacgattccaaacgtcggcgatccgacgacttcaggcctcagaactaccaccagcag
gatttccggcggatgtctgaccacaggccgcccatggggtaccacggccaaggaccttcg
gaccactaccggtccttccacacagacaaactgggagattacaaacagcccctccctccg
tctcaccccgccgtgtcggaccctcgctcgcccccctctcagaaatccccccacgattcc
aagtcgcctcttgatcacaggtcacctctggataggtcattggaacagaaaaacaatcca
gattataactggagcattcggaaagcgtaa
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integrated database retrieval system
