Hirundo rustica (Barn swallow): 120758635
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Entry
120758635 CDS
T09369
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04260
Cardiac muscle contraction
hrt04261
Adrenergic signaling in cardiomyocytes
hrt04814
Motor proteins
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120758635 (TPM1)
04820 Cytoskeleton in muscle cells
120758635 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120758635 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
120758635 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hrt04812
]
120758635 (TPM1)
04147 Exosome [BR:
hrt04147
]
120758635 (TPM1)
Cytoskeleton proteins [BR:
hrt04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
120758635 (TPM1)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of microglial cells
120758635 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
TMF_DNA_bd
DUF745
PUMA_CC
CENP-F_leu_zip
ATG16
Laminin_I
DUF3450
ERM_helical
Lebercilin
MscS_porin
DUF16
GAS
DUF1664
DUF4200
Motif
Other DBs
NCBI-GeneID:
120758635
NCBI-ProteinID:
XP_039933053
LinkDB
All DBs
Position
13:complement(3685994..3705908)
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AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKY
SESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctgaagctggacaaggagaacgccttggac
agagccgagcaagccgaagcggacaagaaggcagcggaggagagaagcaagcagctggag
gacgagctggtggctctacaaaagaagctgaaggccactgaggatgagctggacaaatac
tccgagtcccttaaagatgcacaggaaaagttggaactggctgacaaaaaggccacagat
gctgagagtgaagtagcttctctgaacagacgcatccagctggttgaggaagagttggac
cgggctcaggagcgcttggctactgccctgcagaagctggaggaggctgagaaggctgca
gatgagagcgaaagaggaatgaaggtcattgaaaatagagcccagaaggatgaagagaag
atggaaatccaggagatccagcttaaagaggctaagcacattgctgaagaggctgaccgc
aagtatgaagaggtggctcgtaagctggtgatcattgagagtgacctggagcgcgctgag
gagcgtgctgagctatcagaaagcaaatgtgctgagcttgaagaggagttgaaaactgtg
accaacaacctgaagtcgctggaggctcaggctgagaagtactcacagaaagaagacaag
tatgaagaggagattaaagttctgactgacaaactgaaggaggctgagacccgtgctgag
tttgctgagaggtcagtaaccaagctggagaagagcattgatgacctagaagatgagctc
tatgctcagaaactcaagtacaaggccatcagtgaggagctggaccacgctctcaatgat
atgacttccatataa
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