Hirundo rustica (Barn swallow): 120758670
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Entry
120758670 CDS
T09369
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120758670 (TRPM1)
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120758670 (TRPM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
YVC1_C
EBNA2_Core
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
120758670
NCBI-ProteinID:
XP_039933136
LinkDB
All DBs
Position
13:5071633..5192998
Genome browser
AA seq
1618 aa
AA seq
DB search
MKGQKAWIEKTFSKRECIYIIANNKDATRCCCGQLINQHIPPPPSITANKNEEETKQVEA
QPEKWSVSKHTQAYPTDAYGNLEFQGGGHSNKAMYIRVSYDTKPDSLLHLMVKDWQLELP
KLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTTGAWIFTGGVSTGVIRHVGDALKDHSS
KSRGRICAIGIAPWGIVENKEDLIGKDVTRVYQTMSNPLSKLSVLNSSHTHFILADNGTL
GKYGAEVKLRRQLEKHISLQKINTRLGQGVPVVGLIVEGGPNVISIVLECLREEPPLPVV
ICDGSGRASDILSFAHKYSEEGGIINESLRDQLLVTIQKTFNYNRNQAHQLFVILMECMK
KKELITVFRMGSEGQHDIEMSILTALLKGTNASAPDQLSLALAWNRVDIARSQIFVFGHH
WPPIGSLTAPDGTAPEKEKKSPAPQTKAGRGKGKGKKKGGKAKEEPEEETDPRKLELLNW
VNSLEQAMLDALVLDRVDFVKLLIENGVNMQHFLTIPRLEELYNTRLGPPNTLHLLVRDV
KKGNLPPDYHISLIDIGLVLEYLMGGAYRCNYTRKSFRTLYNNLFGPKRPKALKLLGMED
DEPPTKGKKKKKKKEEEIDIDVDDPEVSRFQYPFHELMLWAVLMKRQKMALFLWQRGEES
MAKALVACKLYKSMAHESSESELVDDISQDLDNNSKDFGQLAVELLDQSYKHDEQIAMKL
LTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNPGLKVIMGILFP
PTILFLEYRSYDDYSYQTSKENEESKEKEEENADANADAGSRKGDEENGKKKQPSLPIGT
KIYEFYNAPIVKFWFYTISYLGYLMLFNYIILVRMERWPSVQEWIVISYIVTLALEKVRE
ILMSEPGKLNQKIKVWLQEYWNITDLVAISVFIIGAILRLQNQPYMGYGRVIYCVDIIFW
YIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFGVARQAILHPDEEPSWRL
ARNIFYMPYWMIYGEVFADQIDPPCGDNLYDDDGKRLPPCIPGAWLTPAIMACYLLVANI
LLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHDRPVLPPPMIIFSLIYIIIKRIC
CRCKKGDGDQDERDRGLKLFLNDEELKKLYEFEEQCVEEYFQEKEDEQQSSNDERIRVTS
ERVENMSMRLEEVNEREHFMKASLQTVDLRLSQLEELSGRMVNALEKLAGIDKSELTYTR
SRASSECDAAYLLRQSSVNSSDGYSMYKYHISGDELTYDDGTAPMSPAMRKKAHSIGAKE
DGADPRMLVPEHQTGLPSSSATADHGKSTVDIAQNVSRPHSGSGGLGSEKQGVFSSDGMI
PQSVNHMNAVMNSHSVAGPDFQNTQLKVERTKLEATISYPLDKSKAMRYFPPETFSACQT
TMMKSRSFIFAQGGKLVGGVNNWTSEYSTIMDQVCPSTIEQWATEWKYEVEQQLSQERPP
EYPGLISEAERQAEEKQMDTDDDSNVGEAGISASYTSMPATVRAEKENLLSVKPERTPGF
PSVRSKSLHSHSRKAKSVKDKLNRPGHASSVTNLVVAFGSATEEQKTSQENASTETEC
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtcagaaggcttggatagaaaagaccttttctaagagagaatgcatctatata
attgccaacaacaaagatgctaccaggtgctgctgtggccagctcattaaccaacatatt
ccacctcctccaagtataacagctaataaaaatgaagaagaaacgaagcaagtggaagct
cagccagagaaatggtctgtcagtaaacacacccaagcatacccaactgatgcctatgga
aacctggaattccagggaggaggacattcaaataaggccatgtacatccgtgtgtcctat
gacactaaaccagattctctgctgcatctcatggtgaaagactggcagctggaactgccc
aaactcctcatctctgtccatggaggcctccagaactttgaaatgcaaccaaaattaaag
caagtgtttggaaaaggtctgataaaggctgccatgaccacaggagcttggattttcact
ggtggtgttagtacaggtgtcattcgtcatgtgggagatgccttgaaagatcattcttcc
aaatccagaggacgaatttgtgccataggaattgcaccgtggggcattgtagaaaacaag
gaagatctcataggaaaagatgtaacacgggtttaccaaacaatgtcaaaccctctaagt
aagctctctgtgctcaacagttcccacacccacttcattctggcagacaacggcacatta
ggtaaatatggagctgaagtaaagttacggcgtcagttggaaaaacacatttccctccag
aaaattaacacgcggctggggcaaggtgttcctgtagttgggctcatagtggaaggaggt
cccaatgtgatctccattgtcttggagtgtctgcgggaagaacctcctctcccagttgtg
atctgtgatggcagtgggcgagcgtccgacattctgtcatttgcacacaagtattcagaa
gaaggagggataataaatgaatcccttagggaccagcttctagttaccatccagaaaacc
tttaactacaacaggaatcaagctcatcagctctttgtcattcttatggagtgcatgaaa
aaaaaagaacttatcaccgtgttccgcatgggctccgaagggcagcacgacatcgagatg
tccatcctcactgctctcctcaaaggtaccaatgcatctgctccagaccagctcagcctg
gctttggcctggaatcgtgtagatattgcacgcagccaaatctttgtctttggacaccac
tggccacctataggaagccttacagctcctgatggtactgctcctgagaaggaaaagaaa
tctccagcacctcagactaaagcaggcagagggaaaggaaaagggaagaaaaagggagga
aaagcaaaagaagaaccagaagaagaaacagacccaagaaaacttgaactcctgaactgg
gtgaactccctggagcaggctatgctggatgcactggtcctggaccgagtggactttgtg
aaactgcttattgagaatggagtgaacatgcagcacttcctgactatccctcgcctggag
gaactttataatactagactgggtccgccaaatacactgcatttgctggtcagagatgtg
aaaaagggaaatcttccaccagattatcatatcagcctaatagacattggtcttgtcctg
gaatatctcatgggtggagcctatcgctgcaactatactcggaaaagttttcggactctt
tataataatttatttggaccaaagaggccaaaagctcttaaactcctggggatggaggat
gatgagcctcccaccaaagggaagaagaaaaagaaaaaaaaggaggaagagatcgatatt
gatgtggatgacccagaagtcagccgctttcagtacccctttcatgagctgatgctgtgg
gctgtgctcatgaaacggcagaagatggccctgttcctgtggcaacgaggggaggaatcc
atggccaaggcacttgtggcttgtaaactctacaagtctatggcccacgagtcttcagag
agcgagctggtggatgacatctctcaggatctggacaacaactctaaagattttggccag
ctggctgttgaactcttggatcagtcctataaacacgacgagcagattgccatgaagctg
ctgacgtatgaactgaaaaactggagtaattctacctgcctgaagctggctgtggcagct
aaacacagggacttcattgctcacacctgcagccagatgctcctcacagacatgtggatg
gggcgactgcgcatgcggaaaaaccccggcctcaaggttataatgggaattctcttccct
cctaccatccttttcctagagtatcggagttatgatgactattcctaccagacatcaaaa
gaaaatgaggaaagcaaagaaaaagaggaggaaaatgcggatgcaaatgcagatgcaggc
tcccgaaaaggggatgaagagaatggaaagaaaaaacaaccgagccttccaattggaaca
aagatctatgaattttataatgcacctattgtcaaattttggttctacacaatatcatac
cttggttacttgatgttatttaattacatcatcttggtgcggatggaacggtggccgtca
gtccaggaatggattgttatctcctacattgtgacactggctttggagaaagtcagagag
attctgatgtcagagcctggcaaactgaaccaaaaaatcaaggtttggctccaggaatac
tggaatattactgatctggtggccatttcagtatttatcataggagcaattcttcgcctg
cagaaccagccatacatgggttatggaagagtgatttactgcgtagatatcatcttctgg
tacattagagtactggatatctttggtgtgaacaaatatctgggaccttacgtcatgatg
attggaaagatgatgattgacatgctgtactttgtggtcatcatgctcgtggttctgatg
agctttggagtagcccgccaggcaatcctgcacccagacgaggagccctcctggaggctg
gctcgcaacatcttctacatgccctactggatgatctacggagaggtgttcgctgaccag
atagaccctccttgtggggacaatctttatgatgatgacggcaaacgcctccctccgtgc
atcccaggggcctggctcactcctgctatcatggcctgttaccttttggtagcaaatatc
ctgttggtgaacctgctgattgctgtcttcaacaataccttctttgaggtaaaatcaata
tccaatcaagtctggaagttccagcggtaccagctgatcatgacattccatgacagacct
gtcctgccaccaccgatgattatcttcagcctcatctacataatcatcaagcggatctgc
tgccgctgcaagaagggtgatggagaccaggatgagcgtgacaggggactgaagttattt
ctgaatgatgaagagctaaaaaaactgtatgagtttgaagagcagtgtgtagaagaatac
ttccaggagaaagaggatgagcagcagtcatctaatgatgaacgcatcagagttacctct
gaaagagttgaaaatatgtctatgaggctggaagaagtgaatgaaagagaacattttatg
aaagcttctctccagacagtcgacctccggctctctcagctggaagagctctctggtcgg
atggtgaatgctctggagaagctggcgggcatcgacaaatccgagctgacgtacacgcgc
tcgcgggcttcgtcagagtgtgacgctgcttacctcctgaggcagagcagtgtgaacagc
tctgatggctacagcatgtacaaataccacatcagtggcgatgagctgacctatgacgac
ggcaccgcgcccatgtcaccagccatgcgtaaaaaagcccactctattggtgccaaagaa
gatggagcagacccaaggatgctggttccagaacaccaaactggactcccttcctcgagt
gctacagcagatcacggtaaatctacagtagacattgcacagaatgtttccagacctcat
tcaggttcaggtggtttggggagtgaaaagcaaggggttttcagtagcgatggaatgatt
cctcaaagtgtaaaccacatgaatgctgttatgaacagtcactcagtagcaggaccagat
tttcagaacacgcagttaaaagtggaacgtaccaaattagaagcaaccatctcttatccc
ttggacaaatccaaagcaatgcgctattttcctcctgaaactttcagtgcttgtcaaacc
actatgatgaagtcaaggagctttatatttgcacaaggtggaaagctggttggaggtgtt
aacaactggacctcggagtatagtaccattatggatcaggtatgtccttctacaattgaa
cagtgggccacggagtggaaatacgaagttgagcagcagctttctcaagagcgtcctcca
gaataccccgggttgatctctgaagcagaaaggcaagcagaggagaagcagatggacaca
gatgatgatagtaatgttggggaagcaggtattagtgcctcttacacctctatgcctgcc
actgtcagggccgagaaggagaatttactgtcagtaaagccagagaggactcctgggttc
ccatcagtacgctccaagagtttgcacagccattcccggaaagccaagtccgtgaaggac
aaattaaatagaccaggacatgccagcagtgtaactaatttggtggtagcgtttggcagt
gccacagaagaacagaaaaccagccaagaaaatgcatccacagaaactgaatgttaa
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