Hirundo rustica (Barn swallow): 120758726
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Entry
120758726 CDS
T09369
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120758726 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120758726 (NEIL1)
Enzymes [BR:
hrt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
120758726 (NEIL1)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120758726 (NEIL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
120758726
NCBI-ProteinID:
XP_039933254
LinkDB
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Position
13:complement(1781450..1784942)
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AA seq
390 aa
AA seq
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MPECPELHLAGRFINGACGALVFAGGVERSAVGRGPEVPFRSEAYGISALARGKELRLTL
SALDAAAGPPAQDLVFRFGMSGSFRLCPAAELPRHAHLRFLTRESPPRALCFVDPRRFGS
WRLGDAWQPERGPCVVSEYQAFRENVLKNLDDRAFDKPICEVLLNQKYFNGIGNYLRAEI
LFRLKIPPFEKARTVLEALKEQEEERRKKDPSLTLSKKVKLKQENPDLLELCHTVPMEVI
TAEKPLLDPEHSDNYAAFKNWLQCYLVPGMSSLRDRNGRTIWFQGEPGPMAPKGQRPRKT
PRKKSPQPKAEPEALSPEVTPRALKRRRRAGANPPKAEEEKEKEADGPKKGRARRRRKAT
AAPAVPEVPPSVRRSLRTSARRGKGTAPAV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagtgcccggagctgcacctggccgggcgcttcatcaacggggcgtgcggagcg
ctcgtgttcgcgggcggcgtggagcgctcggcggtgggccgcggcccggaggtgcccttc
cgcagcgaggcctacggcatctcggcccttgcccggggcaaggagctgcggctgacgctg
agcgcgctggacgccgccgccggcccccccgctcaggacctcgtgttccgctttggcatg
tcggggtcgttccggctgtgccccgccgccgagctgccccgccatgcccacctgcgcttc
ctcacccgggagagccccccgcgcgccctctgcttcgtcgacccccggcgcttcgggtcc
tggcgcctgggggacgcctggcagccggaacgcgggccctgcgtcgtctccgagtaccag
gccttcagggagaatgtgctgaagaacctggatgacagggcttttgacaagcccatctgt
gaggtcctcttaaaccagaagtattttaatggaattgggaattacctgcgtgctgagatc
ctgttcaggttgaagatccctccctttgaaaaagcgcgaaccgtgctggaggccctgaag
gagcaggaggaggagaggaggaagaaggatccttccttgacgctgagcaagaaggtgaag
ctgaagcaagagaacccagatctcctggagctgtgccacactgtgcccatggaggtcatc
acggcagagaagccgctcttggaccccgagcactcggataattacgccgccttcaagaac
tggctgcagtgttacttggtgcctggcatgagctccctgcgtgaccgcaacggcagaacc
atttggttccagggagagcctggccccatggctcccaaagggcagagaccccgcaagacg
ccccgcaagaagagccctcagccgaaggcagagcccgaggccctgagccccgaggtcacc
ccacgtgccttgaaacggcgccgcagggctggagcgaaccccccgaaggcggaggaagag
aaggaaaaggaggctgatgggccgaagaagggacgtgcccgcaggaggagaaaagcgact
gctgctccagccgtgcctgaggtgcctccaagtgtcagaagaagcctccggacgtctgct
cgcaggggcaaaggcacagcccctgccgtgtga
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