Hirundo rustica (Barn swallow): 120758746
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Entry
120758746 CDS
T09369
Symbol
DIS3L
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120758746 (DIS3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120758746 (DIS3L)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120758746 (DIS3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
120758746
NCBI-ProteinID:
XP_039933289
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All DBs
Position
13:18456200..18470823
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AA seq
972 aa
AA seq
DB search
MQTACQAVQHQKGRRQYNKLRNLLKDPRHDCTVFANEFHQHCYLPREKGESMEKWQTRNI
YNAAAWYHNHCLGQMPVVMVTEDEDAIRQYGNETEGVFVISFKNYLDNFWPDLKAAHELF
DSIVQARRERESESQENHGKEYPEHLPVEILEAGIKSGRYLQGTLNVNKHRAQLEAFVRL
QGVGSKDTELQSDILIYGSKARNRAIHGDVVVVELLPVHEWKGRTVALCENETEDKAPAD
TTGDPMPTGKVVGIMQKNWRDYVVTFPSKEESQSQGRNAQKVLVTPWDYRIPKIRISTQQ
AEALQEFRVVVRIDSWESTSLYPNGHFVRVLGRIGDLEGEIAAILVENSICAAPFSEIQM
REMPVSSPKNPWKVSPEEAKKRLDLRDTHLIFSIDPKGCEDVDDALSVRTLPNGNLELGV
HIADVTHFVAANSYTDVEARARATTYYLADRRHDMLPSVLSADLCSLLSGVDRYAVSVLW
ELEKESYETLRVQYTRTLIRSAYKLEYETAQALLDGDTSAVGDILELKGLDEGTRQKKLA
ELVWAISKLTDVARRVRAKRDRCGALELEGIEIRVQLDDKRNIHDLIPKQPLEVHETVAE
CMILANHWVAKRIAEDFPHQALLRQHPPPRQEFFAELRECANAKGFSIDTRSNKALAESL
DRAHDPSDPIVNKLLRSMATHAMSNALYFSTGSCPEEQFHHYGLALERYTHFTSPIRRYA
DIVVHRLLMAATLGGARGEGKDSIISNKDLEELCRHINNRNRAAQRAQKQSTELFQCMYF
RDRSAESDERCVADGVIYSIRTNGVLVFVPRYGIKGAAYMKNKEGLVISCQGAGSCQWKP
GSLHRSQHQITSTTTTGDSLTLSLFDHITVRILVQTSRCHAESIKLEIISNAPHRTADAE
AARESFHVVRSDLVKEVSQCAEEAQRAQERARLEVMDEECREFCQTKGPSLYQLLEEIRE
LALLDVTQDIRT
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcttgtcaggctgtgcagcatcagaaaggacgcagacagtacaacaagtta
cgaaatctattgaaggatccccgtcatgactgtactgtgtttgctaatgaattccaccag
cactgctacctgcccagggagaagggagaatccatggagaagtggcagaccaggaatatt
tacaatgcagcagcctggtatcacaatcactgcctgggtcagatgccagttgttatggta
acagaagatgaagatgccatcaggcagtacggaaatgaaacagaaggagtgtttgtgatc
tccttcaagaattacttggataacttctggcctgacctaaaggctgcccatgagctcttt
gactccatagtccaggctcggcgagaacgggagagtgaaagccaagagaaccatggaaaa
gaatatcctgagcacttacctgtggaaatcctggaggctggcatcaaatctggaagatac
ctgcagggtactctgaatgtcaataaacaccgagcacagctggaagcttttgttcgcctt
cagggcgttggcagcaaagacacagaacttcaaagtgacatccttatttatgggtcaaag
gctcggaatcgtgcaatccacggggacgtggttgtggttgagctgctccctgtgcatgaa
tggaagggaagaactgttgccctctgtgaaaatgagactgaggacaaagcacctgcagac
accacaggtgaccctatgcccacaggtaaagtagttggaatcatgcagaagaactggagg
gattatgtggtgactttcccctctaaagaagagagccagtcccagggcagaaatgctcag
aaagtccttgtgacaccttgggattaccgaattcccaaaatccggatcagcactcagcag
gctgaggcattacaggagttcagagttgtcgtgcgcatcgattcctgggagtcgacttcg
ctgtacccaaacggacactttgtgagagtgctggggaggatcggagacctcgagggggaa
attgcagccatcctggtagagaacagcatctgtgctgcccctttctcagaaatccagatg
agggaaatgccagtgagttctccaaagaatccatggaaagtgagcccagaggaggcaaag
aaacgccttgacttgagagacacccacctgatcttcagcatcgaccccaagggctgcgag
gatgtggatgatgctctctctgtcaggaccctgcccaacgggaacctcgagctgggggtg
cacattgcagatgtcactcacttcgtggctgcaaattcctacactgatgttgaggccaga
gcaagggctaccacgtattacctggcggatcggcgccatgacatgctgccctccgtcctc
agcgctgacctctgctccctcctcagcggggtggacaggtacgctgtgagcgtcctgtgg
gagctggagaaggaatcgtacgagacgctgcgggttcagtacaccagaacgctgatccgc
tctgcctacaagctggagtacgagacagcccaggcgctgctggatggggacacgagtgcc
gtgggggatatcctggagctgaaaggcctggatgaaggaacgaggcagaagaagctggct
gagctggtttgggccatatccaagctcaccgacgtcgcgcgacgcgtccgagctaagcgg
gacaggtgcggcgcgctggagctggaagggatcgagatccgagtgcagctggacgacaaa
cggaacatccacgacctcatccccaagcagccgctggaagtgcacgagaccgtggcggaa
tgcatgatcctggccaaccactgggtggcgaaaaggattgccgaggatttcccccaccaa
gctctgctgcggcagcaccctccgccccgccaggaattcttcgctgagcttcgggaatgt
gccaatgccaaaggcttctcaatagacacacggtccaacaaggctttggccgagtctctg
gacagagcacacgacccctcggatcccattgtgaacaaactgctgcgctccatggccacc
cacgccatgtccaacgccctgtacttctcgactggctcttgtcccgaggagcagttccat
cattacgggctggccctggagcggtacactcacttcacttctcccatcaggagatacgct
gacatcgttgtgcacaggctcttgatggcagcgacgctggggggagccaggggcgagggc
aaggacagcatcatcagtaacaaggatctggaggagctgtgcaggcacatcaataacagg
aaccgggcagcccagcgtgctcagaagcagtccacagagctcttccagtgcatgtacttc
cgagacaggagcgccgagagcgacgagcgctgcgtggccgacggcgtcatctactccatc
cgcaccaacggcgtgctggtcttcgtgccccggtatggaatcaaaggtgcagcctacatg
aaaaacaaagagggcctggtcatctcctgtcaaggggctgggagctgccagtggaagcct
ggatccctccatcgctctcagcatcaaatcacctccaccacaactaccggagactcgctg
accttgagccttttcgatcacatcacagtgagaatcctcgtgcagacttcgcgctgccac
gccgaaagcatcaagctggagatcatcagcaacgcgccgcaccgcactgcggacgccgag
gctgcgcgcgagagcttccacgtggtcaggtctgacttggtgaaagaagtcagccagtgt
gcagaggaggcccagcgtgcccaggagagagccaggctggaagtgatggacgaggagtgc
cgggagttctgccagaccaaggggcccagcctgtaccagctgctggaggagatccgggag
ctggcgctgctggatgtgacacaggacatcaggacttga
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