Hirundo rustica (Barn swallow): 120758783
Help
Entry
120758783 CDS
T09369
Name
(RefSeq) cadherin-12 isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120758783
Cell adhesion molecules [BR:
hrt04515
]
Cadherins
Major cadherins
120758783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Stevor
Cadherin_4
ASFV_J13L
RIFIN
DUF443
Motif
Other DBs
NCBI-GeneID:
120758783
NCBI-ProteinID:
XP_039933358
LinkDB
All DBs
Position
1:complement(78670795..79249405)
Genome browser
AA seq
793 aa
AA seq
DB search
MLTRNCLSLLLWVLFDGGLLTPLHPQPQEILEVQSRENVGPVPGRRSSAQRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGVGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDVDTKKPLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPETSHVGSAIGRIRAVDPDFGK
NAEIEYNIVPGDGGNLFDITTDEYTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SVGPFKDTATVKINVLDMDEPPVFSKPMYTMEVYEDTPVGTIIGAVTAQDLDAGSSSVRY
FMDWKNDVDSYFTIDATEGTIATNELLDRESTAQYNFSIIASKVSNPLLTSKVNVIINVL
DVNEFPPEISVPYETSVCENAKPGQVIQTITAADKDLSPAGQRFSFRLSSEASNKPNFTV
HDYRNNTAGIETRRNGYSRRQQELYFLPVVIEDSSYPVQSSTNTLTIRVCRCDSDGTIQS
CNVEAIFLPVGLSTGALIAILLCIVILLVIVVLYVALRRQKKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEDNKIRRDIKPDTLRFTRHRPPAEDNTDIRDFINQR
LQENDVDPSAPPYDSLATYAYEGNGSVAESLSSIDSLTTEADQDYDYLSDWGPRFKILAD
MFGEESYNPDKVT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgctcacaaggaactgcttatccctgcttctctgggtcctgtttgatggaggtctccta
acaccactgcatccacaaccacaagagattttagaagtgcagtcaagagaaaatgttggc
ccagtgccagggaggagatcatctgcccagcgagtcaaacgaggctgggtatggaatcaa
ttttttgtgctggaggagtacatgggctctgaacctcagtatgtgggaaagcttcattct
gacttggataagggagtcggcactgttaaatataccctttcaggagatggtgctggcaca
gtttttaccattgatgagacaacaggcgacattcatgccataaggagcctagatcgagaa
gaaaaacctttctacacactccgggctcaggctgtggatgttgacaccaagaaaccacta
gagcctgaatcagaattcatcatcaaggtgcaggacattaatgataatgagccaaagttt
ctggatgggccttatgttgccagtgtcccagaaatgtctccagtgggagcatatgtgctt
caagtaaaggcgacagatgctgatgatcccacttacggaaacagtgctagagtggtttac
agcattcttcaggggcaaccatatttctccattgatcctaagacaggtgtaataagaaca
gctttgccaaatatggacagagaagtgaaagaacaatatcaagttctaatccaagccaag
gacatgggaggacagctggggggactagctggtactaccaccgtaaatattactctcacg
gatgtcaacgacaacccacccagatttcctaaaagtatcttccatttaaaagtacctgag
acctctcacgttggttctgctattggacggatcagagctgtggaccctgattttgggaaa
aatgcagaaatcgagtacaacatagttccaggagatggaggaaatttgtttgacatcaca
acagatgaatatacccaggaaggagtcattaaactgaaaaagccattagactttgaaacg
aagaaggcatacacctttaaggtggaggcctccaatctccatcttgaccatcgatttcac
tcagtgggtccattcaaagatactgccactgtgaagataaatgtgttggacatggatgaa
cctccagtgttcagcaagcccatgtacacgatggaagtctatgaggatacaccggtggga
accattataggtgcagtgacagcacaagaccttgatgctggcagcagctcagttagatac
ttcatggattggaagaacgatgtggacagctactttacaatagatgctactgaaggaacc
attgctactaatgaattactggacagagaaagcacagcacaatacaatttctctataatt
gcaagtaaagttagtaacccactattaaccagcaaagtcaatgttataataaatgttttg
gatgtcaacgagtttcctcctgaaatttcagttccatatgagacatctgtatgtgaaaat
gccaagccaggacaggtgatacagaccatcactgcagcagataaagatttgtcaccagct
ggacaaaggttttccttcagactgtcatctgaggcttccaacaaaccaaacttcacagtc
catgactacagaaataacacagctgggattgaaaccaggagaaatggctacagcagaagg
cagcaagagctgtactttcttccagtagtaatagaagacagcagttaccctgtccagagc
agcacaaacactttgactatccgtgtttgcagatgtgattctgatggcaccatccagtcc
tgcaatgtggaagcaatcttcttaccagtcggcctcagcacaggagctctgattgcaatc
ttgttgtgtattgttatacttctagtcattgtggtactgtatgtagcactacggaggcag
aagaaaaaggacaccctgatgacctctaaagaagacatcagagataatgttatccattat
gatgatgaaggtggtggagaagaggacactcaggcttttgacataggtgccctgaggaac
cccaaagtgattgaagataacaaaatacgcagggacataaaaccagacaccttgcgtttt
acacgccacagaccaccagcagaagataacacagacataagagatttcattaatcaaagg
ttgcaggaaaatgatgtagatccatctgcacccccttatgactccttggcaacctatgct
tatgaaggaaatggatctgttgcagagtctctcagctctatagactccctcactacagag
gcagatcaggattatgactatctgagtgactggggacctcgctttaagatcttggcagat
atgtttggagaagaaagttataaccctgacaaagtcacttaa
DBGET
integrated database retrieval system
