Hirundo rustica (Barn swallow): 120758796
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Entry
120758796 CDS
T09369
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120758796 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120758796 (SIN3A)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120758796 (SIN3A)
REST complex
120758796 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120758796 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
120758796
NCBI-ProteinID:
XP_039933383
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All DBs
Position
13:1736450..1768264
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRITSSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSGHHHPAPVQPHGSQVVQSHAHPTPPAVPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPPHPSQPSAQSTPTPAQ
PAPQPTPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRP
NQNGCQIRRHSGTGATPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSL
AYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLH
QILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYY
PAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENSSGATGGLLASQSSRALLEAAYQRKAEQLMSEENCFKLMFIQSRGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETNKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTIFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgattggatgagcaggagtcacccgtgtatgcgtcgcagcagagacgtatc
accagcagcaccgaggctttcccgcaccagcaccgcgtgctcgccccggccccgccggtc
tatgaggcggtttccgagaccatgcagtcggccacggggatccagtactccgtaactccc
agctaccaggtgtcggccgtgccgcagagctcgggcagccacggcccggccatcgccgcc
gtgcacagcggccaccaccaccccgcgcccgtgcagccccacggcagccaggtggtgcag
agccacgcgcaccccacgcccccggccgtgcccgtgcagggccagcagcagttccagagg
ctcaaggtggaggatgcattgtcttaccttgaccaggtgaagctacagtttggtagtcag
ccacaagtctacaatgacttcttggatattatgaaggaatttaaatctcaaagcatcgac
accccgggggtgatcagccgtgtgtcgcagctcttcaagggccacccagacttgatcatg
ggtttcaacaccttcctgccacctggctacaagattgaggtgcagaccaatgacatggtg
aacgtgacaaccccggggcaggttcaccagatccccacccacgggctgcagccccagccc
cagccgcagccgccgcatccgtcgcagccttcggcgcagtcgaccccgacaccagcacag
ccggcgccacagcccacacctgccaaaatcagcaagccatcgcagttgcaggctcatacc
cctgccagccagcaaacgccgccgattccgccgtacgcgtcgccgcgctcgccgccggtc
cagccccacacgcctgtgacaatctctctgggcaccacaccgtccctgcagaacaatcag
cccgtggagtttaatcacgccatcaactatgtcaacaagatcaagaatcggttccaggga
cagccagacatctacaaagccttcctggagattctccacacatatcagaaagagcagcgt
aatgccaaggaggcaggagggaactacacaccagctctgacagagcaggaggtctatgcc
caggtggctcgcctcttcaagaaccaggaggatctgctctcggaatttgggcaattcctg
cctgatgccaacagctctgtgctgttaagtaagacaactgcagagaaagtggagtcggtc
aggaatgaccacgggggcacggtgaagaagccacagctcaacaacaagcagcagagaccc
aaccagaatggctgccagatccgacggcactcgggcaccggagcaacccctccggtgaag
aagaaaccaaagctgcttggtttgaaagaccagtctctggcagaagccagcaaacatggt
gtggggacagaatctctcttctttgagaaggtgcgcaaggctctgcgtagcacagaagcg
tacgagaacttcctgcgctgcctggttattttcaaccaggaggtgatctcccgggccgag
ctcgtgcagctggtttctccattcctggggaaattcccagaactgttcacttggtttaaa
aactttctgggatataaggagtctgttcacatggagacgtatccgaaggaacgggctact
gaggggattgccatggagattgactatgcctcctgcaagaggctgggctccagctaccga
gccttgcccaagagctaccagcagcccaagtgcacggggcggactcctctgtgtaaagag
gttttgaatgacacctgggtctccttcccatcctggtctgaagattccacatttgtgagc
tccaagaagacacaatatgaggagcacatctacaggtgtgaggacgagcgttttgagctg
gatgttgtcttggagaccaacctggcaacgatccgtgttctcgaggcaatccagaagaag
ctgtcacgcttgtctgcggaagagcaggccaaattccggctggacaacaccctggggggc
acctcggaggtgatccaccgcaaggctctccagaggatatatgctgataaagcagctgac
atcatcgatgggcttcgtaagaacccctccgtggctgttcccattgtgctgaaaaggtta
aagatgaaagaggaggagtggcgagaagcccagagaggatttaataaagtctggcgagag
caaaatgagaagtattacctgaaatccttggaccaccagggcatcaacttcaagcagaat
gataccaaggtcctaaggtcaaagagtctcctcaatgagattgaaagcatctatgatgag
aggcaagaacaggcttcagaagacaatgctggagtccccacgggcccacacctctcgcta
gcctatgaagacaagcagatcctggaagatgctgcctctctcatcatccaccacgtgaag
cgacagacgggaatccagaaagaggacaagtacaaaatcaagcagatcatgtatcacttc
attccagacctgctgtttgctcagcgaggtgaactctcagatgtggaagaggaagaagaa
gaggaaatggatgtggacgaagctactggggctgcaaaaaagcacaacggcgttgggggt
agccctcccaaaaccaagctgatgttcaacaacacgacagcccagaagctgcggggcatg
gatgaggtctacaacctcttctacgtgaacagcaactggtacatcttcatgaggctgcac
cagatcctgtgcctgcggctgctgcggatctgcacccaggccgagcggcagatcgaggaa
gagacgcgggaacgggagtgggagagggaagtgctgggcataaagcgagacaagagcgac
agtcctgccatccagctgcgactgaaggagcccatggacatcgatgttgaggattattac
ccggccttcctggacatggtgcgcaacctcctggacgggaacatggactcgtcgcagtac
gaggactccctgcgcgagatgttcaccatccacgcctacatcgccttcaccatggacaag
ctgatccagagcatcgtccgacagctccagcacatcgtgagcgatgagatctgcgtgcag
gtgacggacctgtacctgtcggagaacagcagcggagccacgggaggtctcctggcgtcc
cagtcctcccgcgcgctcctggaggccgcgtaccagcgcaaagccgagcagctcatgtcc
gaggagaactgcttcaagctgatgtttattcagagcagaggtcaagttcagttaaccatt
gagctgctggacacagaagaggagaactcggatgaccctgtggaagcagagcgctggtcc
gactacgtggagcggtacgtcaactctgattctacctcccctgagctccgcgagcacctg
gcccagaaacccgtcttcctgcccaggaacctgaggcggatccgcaagtgtcagcgtggt
cgggagcagcaggagaaggaagggaaggagggaaacagtaagaaatccatggagaacgtg
gagagcctggacaagctggagtgtaaattcaagctgaactcctataagatggtgtacgtg
atcaagtcggaggattacatgtacaggaggaccgcgctgctgcgagctcagcagtcccac
gaaagggtgagcaagcggctgcaccagcggttccaggcctgggtggacaaatggaccaag
gagcacgtgccccgcgaaatggcagccgagacaaacaagtggctcatgggtgaagggttg
gagggcttggtgccctgcaccaccacctgtgacacagagaccctgcactttgtcagcatc
aacaagtaccgcgtcaaatacggcacgatattcaagacgccctag
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