Hirundo rustica (Barn swallow): 120758953
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Entry
120758953 CDS
T09369
Symbol
ITGA11
Name
(RefSeq) integrin alpha-11
KO
K06587
integrin alpha 11
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04510
Focal adhesion
hrt04512
ECM-receptor interaction
hrt04518
Integrin signaling
hrt04810
Regulation of actin cytoskeleton
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120758953 (ITGA11)
04518 Integrin signaling
120758953 (ITGA11)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120758953 (ITGA11)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120758953 (ITGA11)
04810 Regulation of actin cytoskeleton
120758953 (ITGA11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120758953 (ITGA11)
Cell adhesion molecules [BR:
hrt04515
]
Integrins
Integrin alpha subunits
120758953 (ITGA11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
LYRIC
Motif
Other DBs
NCBI-GeneID:
120758953
NCBI-ProteinID:
XP_039933683
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Position
13:complement(19273818..19317718)
Genome browser
AA seq
1084 aa
AA seq
DB search
MRLGLSLAANPRDSSVLACSPLWSHECGSSYYTTGMCSRVNANFRFSRTVAPALQRCQTY
MDIIIVLDGSNSIYPWVEVQHFLINILKKFYIGPGQIQVGVVQYGEDVVHEFHLNDYRSV
QDVVAAASHIQQRGGTETRTAYGIEFARSEAFRKGGRKGAKRVMIVITDGESHDSPDLEK
VIEDSERDNVTRYAVAVLGYYNRRGINPEAFLNEIKFIASDPDDKHFFNVTDEAALKDIV
DALGERIFSLEGTNKNEISFGLEMSQAGFSSHVVEDGILLGAVGAYDWNGAVLKETSGGK
VIPLRESYLQEFPEELKNHGAYLGYTVSSVVSSKRERIYVAGAPRFNHTGKVILFSMHGD
GNLTIHQALKGEQIGSYYGSEISSLDADGDGVTDALLVGAPTFFSEGRERGKVYVYALQG
NLFVPGGALLDLPSYQNSRFGSCIAAVPDLNQDSYNDLVVGAPLEDEHQGAVYVFLGFRR
TVLRKYKQRIAAADLAPGLMYFGISIHGQLDLDEDGLVDVAVGSLGNAVLLWSRSVVRID
ASLRFEPPKINVFAKDCRRGGKEAACMRAFVCFTALFLSARFQAASVGLRYNTSIDERRY
SPRAHLDEGGERTAPRRMELPGGKELCHTLPFHVLDTADYVKPVTFSIEYELEHPERGPV
LDDGWPTSLRASVPFWNGCNEDEHCVPDLVLDARSDVPSAAEFCRRALRRGDCSAFSLSF
DASVFVIESSRRRVAVEATLENRGENAYSAVLNISFSRNLQFASLIPKDDTDINIDCAGD
DRHPTRRVCNVSYPFFRAKAKVAFRLDFEFSKSVFLQSMEVYMVASSDSEEKESTKEDNV
AHLNFQLKYEADLLFTRTSSLDYFEIRSNNSLDGSNPFGPPFHCTFTLQNLGFFPVHGVS
LRITVPVATRAGNRLLLPAEFRADQENTTCTVWGNSTDYRRTPAEEDLSRTPHLNHSNSD
AVSVECQVTLAPGQELNLLLRGNLWMRSLKALKFKVLKLTTIAALQRRFRSPFVFREEDP
SRQITFEISKPEEWQIPIWIILGSTFGGLLLLALLVLALWKLGFFKSGSRRRAAEREQNS
QGTE
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgggcctgagcctggccgccaaccccagggacagcagcgtcctggcctgcagc
ccgctgtggtcccacgagtgcggcagctcctactacaccacgggaatgtgctcccgcgtc
aacgccaacttccgcttctccaggaccgtggctccggccctgcagagatgccagacctac
atggacatcatcatcgttctggatggatccaacagcatttatccgtgggttgaagtccag
cacttcctgataaacatcctgaagaagttttacatcggtcctggacagatccaggtggga
gtggtgcagtacggagaggacgtggtccatgagttccacctgaacgactacaggtccgtg
caggacgtggtggcggccgccagccacatccagcagcgcggcggcaccgagacccggacc
gcctacggcatcgagttcgcccgctcggaagcgttccggaaaggcggccggaaaggggcc
aagagggtgatgattgtcatcacggacggagagtcccacgacagccccgacctggagaag
gtgatcgaggacagcgagagggacaacgtcacccgatacgccgtggcggtcttgggctac
tacaacaggagaggaatcaaccccgaggcctttctgaacgagatcaagttcatcgccagc
gaccccgacgacaaacacttcttcaacgtcaccgacgaggccgcgctcaaggacatcgtg
gacgccctgggagaaaggattttcagcctggaaggaaccaacaagaacgagatttccttc
ggactggaaatgtcccaggccggattttcatcccacgttgtggaagacgggatcctgctg
ggagcggtgggagcctacgactggaacggagccgtcctgaaggaaaccagcggcgggaag
gtgatccctctgcgggaatcctacctgcaggaattcccggaggagctgaaaaaccacgga
gcctacctaggttacaccgtctcctccgtcgtctccagcaagcgcgagcggatttacgtg
gcgggagcgccgcggttcaaccacaccggcaaagtcatcctcttcagcatgcacggcgac
gggaacctcaccatccaccaggccctcaagggagagcagatcggctcctactacggcagc
gagatcagctccctggacgcggacggcgacggcgtcacggacgcgctgctggtgggagcg
cccaccttcttcagcgagggcagggagaggggcaaggtctacgtgtacgccctgcagggg
aacctcttcgttcccggcggcgccctcctggacctcccgagctaccagaactcccgtttc
ggctcctgcatcgccgccgtccccgacctcaaccaggattcctacaacgacctggtggtc
ggggcgcctctggaggacgagcaccaaggagccgtttacgtcttcctgggattccggcgg
accgtcctgaggaagtacaagcagcggatcgcggccgccgacctcgccccgggcctgatg
tatttcgggatcagcatccacgggcagctggatctggacgaggacgggctggtggacgtg
gccgtgggctccctggggaacgccgtgctgctgtggtcgcgcagcgtggtgcggatcgac
gccagcctccgcttcgagccgcccaagatcaacgtcttcgccaaggactgccggcgcggc
gggaaggaggccgcctgcatgagggccttcgtctgcttcaccgcgctcttcctctccgcc
cgcttccaggccgccagcgtggggctcaggtacaacaccagcatcgacgagcgccgatac
tcgccccgggcgcacctggacgagggcggcgagcggacggcgcccaggaggatggagctt
cccggcgggaaggagctgtgccacaccctgcccttccacgtcctggacacggcggattac
gtgaagccggtgacgttctccatcgagtacgagctggagcacccggagcgcggccccgtg
ctggacgacgggtggcccacctcgctcagggcctctgtccccttctggaacggctgcaac
gaggacgagcactgcgtccccgacctggtgctggatgccaggagcgacgttcccagcgcc
gcggaattctgccggagggcgctgcggaggggggactgctcggccttcagcctctccttc
gacgcctccgtcttcgtcatcgagagcagcaggagaagggtggcggtggaagcgacgctg
gagaaccgcggggagaacgcctacagcgccgtcctcaacatctccttctccaggaacctc
cagttcgccagcttgatccccaaggacgacaccgacatcaacatcgactgcgccggtgac
gacaggcaccccaccaggagggtgtgcaacgtcagctaccccttcttccgagccaaggcc
aaggtcgctttccgcctggatttcgagttcagcaagtccgtcttcctgcagagcatggag
gtctacatggtggccagcagcgacagcgaggagaaggagagcaccaaggaggacaacgtt
gcccacctcaacttccagctcaagtacgaggccgacctcctcttcaccaggacgtcgagc
ctggactatttcgagatcagatccaacaattccctggatggatccaaccccttcgggccc
cccttccactgcaccttcacgctgcagaacctgggattcttcccggtgcacggggtgagc
ctaaggatcaccgtgcccgtggccacgcgggcgggaaaccggctcctgctgcccgcggaa
ttccgggcggatcaggaaaacaccacctgcaccgtctgggggaacagcactgactaccgg
agaacgccggcggaggaggatctgtcccgcaccccacacctgaaccacagcaactccgac
gccgtttccgtcgagtgccaggtgacgctggcgcccggccaggagctgaacctgctcttg
cgcgggaacctgtggatgcgatccctgaaagcgctcaagttcaaggtgctgaagctcacc
accatcgccgcgctccagcggcgcttccggagccccttcgttttccgggaagaggatccc
agccgccagatcacctttgagatctccaagcccgaggaatggcagattcccatctggatc
atccttgggagcaccttcgggggtctcctgctcctggccctgctcgtcctggcgctctgg
aagctcgggttcttcaagagcgggagccgccggcgagcggcggagcgggagcagaattcc
caagggacggagtga
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