Hirundo rustica (Barn swallow): 120759028
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Entry
120759028 CDS
T09369
Symbol
RARS1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120759028 (RARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hrt01007
]
120759028 (RARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrt03016
]
120759028 (RARS1)
03029 Mitochondrial biogenesis [BR:
hrt03029
]
120759028 (RARS1)
Enzymes [BR:
hrt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
120759028 (RARS1)
Amino acid related enzymes [BR:
hrt01007
]
Aminoacyl-tRNA synthetase
Class I (G)
120759028 (RARS1)
Transfer RNA biogenesis [BR:
hrt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120759028 (RARS1)
Prokaryotic type
Other AARSs
120759028 (RARS1)
Mitochondrial biogenesis [BR:
hrt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120759028 (RARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Cnn_1N
tRNA-synt_1
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
120759028
NCBI-ProteinID:
XP_039933791
LinkDB
All DBs
Position
14:14060824..14077487
Genome browser
AA seq
661 aa
AA seq
DB search
MEARVAESVARLARQENEIKLLTAEIEHLKNFGCLGVSPSLEGLRDENAKLKYRLNFLKK
SLQEERSKSVKSMININSCLQEIFGAAIQAAYPDLENPPLVVTPSQQPKFGDYQCNSAMG
ISQILLKTREQKVIPREIAEKIVKNIPANECIEKVEIAGPGFINVHLRKDFVSKQLSSLL
INGVQPPAIGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLG
DWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLLQS
KNPDFIKAWNLICDVSRREFQKIYNCLDITIIERGESFYHEMMKDIVKEFEDKGFVQVDD
GRKVVFVPGFPVPLTIMKSDGGYTYDTSDLAALKHRLCEEKGDILIYVVDSGQSVHFQTV
FAAGQMIGWYDPKVTRVAHAAFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRAMDKLKD
KERDKVLTPEELKAAQTSVAFGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLYAFT
RIRAIARLANIDEQMLRKAAREEVLVLDHEKEWKLGKCILRFPEILQKILEDLLLHTLCD
YLYELATTFTEFYDSCYCVEKDRQTGQIVKVNMWRLLLCEATATVMAKGFDILGIKPVQR
M
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcgcgtggcggagtccgtggcgaggctggcgcggcaggaaaacgagatcaag
ttgttaactgcagaaattgagcatctgaagaactttgggtgcttgggagtctccccaagt
ttggaggggttgcgagacgaaaacgcgaagctcaagtaccggttaaacttccttaagaag
agtcttcaagaggaaagaagtaaatcagtcaaaagcatgattaatatcaacagctgtctc
caggagatctttggagctgccattcaggctgcctacccagacttagaaaaccctcctctg
gtggtgacaccaagtcagcagcccaaatttggggactaccagtgtaacagtgccatgggc
atatcgcagatactgctcaaaaccagggaacagaaagttatcccacgagaaattgcggag
aaaatagtaaaaaatattcctgccaatgaatgcattgagaaagtcgaaattgctggtcct
ggttttatcaatgtccacttgagaaaggattttgtgtcgaagcagctgagcagtttattg
atcaatggagttcaaccaccagctattggcaaaaggaaaaaggtggtggtggatttttcc
tcccccaacattgccaaggagatgcatgttgggcacctgcgctctaccatcatcggggag
agcatgtgccggctcttcgagttcgcgggttacgatgttctcaggctgaaccatttagga
gattggggcacacagtttggaatgctcattgctcacctccaggacaaatttccagattac
ttaactgtttctcctcccattggggatctccaagctttttacaaggaatccaagcggagg
tttgacacagaggaggaatttaagaagcgagcctaccaatgtgtggtgctgctgcagagc
aaaaaccctgacttcattaaagcctggaatctcatctgtgacgtgtcacgcagagaattc
cagaaaatctacaactgtttggacatcacaatcatagagaggggggaatccttctaccat
gagatgatgaaagacattgtgaaagaatttgaagataaaggatttgtgcaggttgatgat
ggccggaaggtcgtgttcgtgccgggtttccctgtcccgctgacaatcatgaaatcagac
ggaggttacacgtatgacacatcagacttggctgctctgaagcacaggctgtgtgaagag
aagggtgacatcctcatctacgttgtggatagtggccagtctgtgcatttccaaacagtg
tttgcagctggacagatgattggctggtatgatcccaaagtcaccagagtggcccatgct
gcctttggagtggtgctgggagaagacaagaagaagttcaaaactcgttcaggggacacg
gtgcgtctcatagacctgctggaggaaggactgaaacgagccatggacaaactgaaagac
aaggaacgggacaaggtcctgacgccagaagagctgaaagctgcccagacgtcggtggct
tttggatgcattaaatacgcagatctgtcccacaacagactcaatgattacgtgttctcc
tttgacaagatgctggatgaccgagggaacacagctgcctacctgctctatgccttcaca
cggatcagggcaattgctcgcctggccaatatcgatgagcagatgctgcggaaggcagcc
agggaggaggtgcttgtccttgaccatgagaaggagtggaaactgggcaagtgcatcttg
aggtttcctgagatcctgcagaagatcctggaggacttgttattgcacacactctgtgac
tacctgtatgagctggccaccaccttcaccgagttctacgacagctgctactgcgttgag
aaggacaggcagactggccagatcgtgaaggtgaatatgtggaggctgctgctgtgcgaa
gccactgccaccgtcatggccaaaggattcgacatcctgggcattaagcctgtgcagagg
atgtag
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