Hirundo rustica (Barn swallow): 120759125
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Entry
120759125 CDS
T09369
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120759125
Cell adhesion molecules [BR:
hrt04515
]
Cadherins
Protocadherins
120759125
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
120759125
NCBI-ProteinID:
XP_039934033
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Position
14:15823742..15829141
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AA seq
960 aa
AA seq
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MGAGAGSGRGQLFLRSLLFLLLAGPPARHPARGQLRYAVPEELEHGAFVANLGEDLGLDV
STLSARRFRIVSRAGARQHLEVNLENGILFVNERIDREEVCEAGGTCLLHLQLLVESPLE
LYRVEVEVLDINDHAPTFPWQEYVLEVAESAVLGARFPLESAQDPDVGTNSVHTYRLSPN
GFFSLEVQTRSDASKFAELVLERALDREQQRVHRLLLTALDGGVPERSGTAHILVTVLDA
NDNVPAFDQPSYGVSLPEDAPAGTLVIQLNATDLDEGPNGEIEYSFSGHAPARVRELFHV
EPRSGQVLLKGRLDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSV
STPVLEDAPPGTVIAVISVLDRDSGDNGRVSCEVGPNVPFELRSSFRNYYTLVTTQALDR
EAVPEYNVSITARDMGSPALLTRSTLTIPVSDVNDNAPRFLQPSYSVYVMENNAPGASIC
SVSALDPDCQQNAYLSYSIADGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSFQIQV
QAQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPMPRNGSVATELVPRSARPGYLVGTVSA
VDADAGLNSRLSYQLLQATDFTLFSVAPDTGELRTLRSFLEQDASRQQLVVQVRDGGQPA
LSATVSLLLSVVETMPQTLSDFSEFSLPPEVSSSSPLTLYLLVSLGSISFTFLLAILILT
AIRCRGERRSRQGDSCSPPRCRCCPGSRPSSDGLKTSNLTAQPPAGTAAATCLDVPAGGP
PGYCYKVCLGPESAQSDFMFLKPCSPPRNNEKDPGKRSRPEQHLQVSKEAKQPNTDWLPP
STQRPALKSSQSLEDVGEIHRALQKEHERLCTLVTPVSEFQKASAGPNSIWTPQYSPLYP
ALDYQHNVYIPGTPTLLSSKDGPHFPGRENKNSFSTFGKRKKMTTYCDMHDSVVINNDLK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgggggccggggcaggctccgggcgggggcagctcttcctccgctccctcctcttcctc
cttttggccgggcccccggcgcgccacccggcgcgggggcagctgcgctacgccgtgccg
gaggagctggagcacggagccttcgtggccaacctgggtgaggacctgggactggatgtg
tccaccctgtcagcgcggaggttccgcatcgtgtcgcgggccggggccaggcagcacctg
gaggtgaacctggagaacgggatcctcttcgtgaacgagcggattgaccgggaggaggtg
tgcgaggccggggggacgtgcctgctccacctgcagctcctcgtcgagagcccactggag
ctctaccgcgtggaggtggaggtgctggacatcaacgaccacgcacccaccttcccctgg
caagaatatgtgctggaggtggccgagtctgccgtgctcggcgcccgcttccctctggag
agcgcccaggatcctgacgtgggaaccaactctgtgcacacctaccgcctcagccccaac
ggtttcttttctcttgaggtgcagacacgcagtgacgccagcaagtttgcagagctggtg
ctggagcgtgccctggaccgtgagcagcagcgagtgcaccggctgctgctcaccgctctc
gatggcggcgtccccgagcgctcgggcacagctcacatcctcgtcacggtgctggacgcc
aacgacaacgtgcctgcctttgaccagccctcctacggtgtgagccttcccgaggatgct
cccgctggcactctggtcatccagctcaatgccactgacctggatgagggccccaacggg
gagatcgagtactccttcagtgggcacgcaccagcacgtgtccgggagctcttccacgta
gaaccccggagcgggcaggtgctgctgaagggccgcctggactacgagcgggccagcctc
cacgagctgtatgtgcaagccaaggaccgcggaccctcagctgtggctgtgcactgcagg
gtgcttgtgcacctcctcgatgtcaacgacaacgccccagaggtgaccctcacctctgtg
tccacccctgtgctggaggacgccccgccaggcacggtgatcgctgtcatcagcgttctg
gaccgggactctggggacaacgggcgcgtgagctgtgaggtcggccccaatgtgccgttc
gagctccgctcctccttccggaactactacacgctggtcaccacgcaagcgctggacagg
gaggctgtgcccgagtacaacgtgagcatcacggcgcgagacatgggctcgcctgcactg
ctgacccgcagcaccctcaccatccccgtgtctgacgtgaacgacaacgctccgcgcttc
ctccagccctcctacagcgtctacgtgatggagaacaacgcgccgggcgcctccatctgc
tccgtcagtgcgttagaccccgactgccaacagaatgcctacctgtcctactccattgcc
gacgggcacatccacggcatgcccgtgggcacatacgtgtctatcaactcggacagcggg
cacatgtacgccctgcgctccctcgactacgagcagatccgcagcttccagatccaggtg
caagcacaggacgcggggtttcccccgctcagtgccaacgtcaccgtccacatcttcgtg
ttggaccagaacgacaacgctccggtcatcgtttcccccatgccgcgcaacggctccgtt
gccaccgagctggtgccgcggtcggccaggcctggctacctcgtgggcacggtgtcggcg
gtggacgccgatgcggggctgaactctcgcctctcctaccagctcctccaggctactgac
ttcaccctcttcagcgtggcgcccgacacgggcgagctgcgcaccctccgctcctttctg
gagcaggacgcaagccggcagcagctggtggtgcaggtgagggacggtgggcagccagcc
ctctctgccaccgtgtccctcctgctttcggtggtggagaccatgccccagactctctcc
gacttcagcgagttcagcctccctccagaggtctcctcatcttccccactcaccctctat
ctccttgtctccctgggctccatctccttcaccttccttctggccatcctcatcctcaca
gccattcgctgccgtggagagcggcgttcccgccagggggacagctgctcgccccctcgc
tgccgctgctgtcccggctccagaccctcctccgatggcctcaagacttccaacctgacg
gcacagccccctgcagggaccgcggctgccacctgccttgatgtgcctgcgggcggcccc
ccaggctactgctacaaggtctgcctcggtcccgagtctgctcagagcgacttcatgttc
ctgaaaccctgcagccccccccgaaacaacgagaaggatcccgggaagcggtcccggccg
gagcagcatctccaggtctccaaagaggccaagcagcccaacacagactggctgcctcca
agcacacagcgacctgccctgaaaagctcccagagcctggaagatgtgggggaaatccac
agagccctccagaaggagcacgagaggctgtgcacgctggtgacccccgtctctgagttt
cagaaggcttcagcaggccccaacagcatctggacaccccagtacagccccttgtaccca
gctctggattatcagcacaacgtttacatccctggcacccccactctgctttccagcaag
gatgggccccacttccccggccgggagaacaaaaacagcttctccacctttggcaagagg
aagaagatgacaacttactgtgacatgcatgacagtgtggttatcaacaacgacctgaaa
tag
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