Hirundo rustica (Barn swallow): 120759160
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Entry
120759160 CDS
T09369
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120759160
Cell adhesion molecules [BR:
hrt04515
]
Cadherins
Protocadherins
120759160
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
120759160
NCBI-ProteinID:
XP_039934089
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Position
14:16119096..16122809
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AA seq
813 aa
AA seq
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MAIARQVLCVCAFLSLPHAGAEPIRYSVAEEAESGSLVGKLAEDAGLTPAQLSARRARLV
SDDGRQHFRLDRASGRLVVAGRLDREELCGQAPSCMLPFELLLAEPLQFFRVEVALEDIN
DHSPVFPEERVRFDIPESSEPGSRFLVEGARDLDIGSNSIQAYSISPENEYFSVSYASQS
ADDKYVELVLEKALDREEQAEMSFSVIAEDGGSPPRRGTIQVHVIILDANDNAPVFTKER
YVGKVLENMPEGSVVLTVLATDQDAGVNGDISYQLSQAVGQSDSAFVIDPITGEIKLTKS
LDYEAAETHDLRVMARDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPLPENTVPGTVV
ALFSVRDRDSGANGKISCALEDQLLFSLRPAYKNYYELVTVSALDREETAQYVLSVTAAD
AGSPPLTTTQTFTVDVSDVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSAADADVGLNAK
VTYSLAPAQAAERPRCSCISVNSENGHVFVLRPLDYEHLRQTEVTVVASDAGSPPLRANV
TVRLVVLDENDNAPLVLYPGQESGAASSELVPVSAEAGYLITKVVAVDADSGQNSWLSYH
LLRATEPGLFTVAAQSGEVRLRRPVTDRDSVKQKLVVLVRDNGQPPLSATAALSALLLKD
FSDVRLPHSSAATEEQDGSLTTYLIISLVFVSLLFLISAAVFVARKVCRRKELQAGHVLY
GADNLQSGLADAAAAGTLPRAYCYEISLTTGSGNSEFKFLKPILPSLPPQHCATGQGPEE
GQDFPCVPVSTEDMAPDNPGTLSARQFNALSFD
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtgtctgtgctttcctctcgctgccgcacgctggc
gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtcggcaag
ctggccgaggacgcggggctgacgccggcgcagctctcggctcgccgcgcccgcctggtg
tcggacgacggccggcagcattttcgcttagaccgcgcctccggccgcctcgtcgtggcg
gggaggctggaccgggaggagctgtgcggccaggcccccagctgcatgctccccttcgag
ctgctgctcgccgagccgctgcagttcttccgggtcgaggtggctctggaggacatcaat
gaccactcacctgttttccccgaggaacgagtccgttttgacatcccggaaagcagcgag
ccgggttcgcgtttcctggtggaaggggctcgggacctcgatattggcagtaacagcatc
caggcatacagcatctctcctgagaacgagtatttcagtgtctcctatgcgtctcagagt
gcggatgacaaatatgttgaactggttttggaaaaggcactagacagggaggagcaggca
gagatgagtttcagtgttattgctgaagatgggggttctcctcccaggcgtggaaccata
caagtccacgttataattctagatgcaaacgacaatgctcctgtcttcacaaaagagcgt
tacgttgggaaggttctggagaacatgccagaaggttctgtggttctgactgtgctggca
actgatcaggatgcaggagttaatggggacatttcctatcaactgagccaagcagtggga
cagagtgactcagcatttgtgattgatcccataactggagaaattaaactcacaaaatct
ctggactatgaggcagcagagactcatgatctccgtgtgatggccagagatggagggggc
ctttcagcaatctgcaaggtgttggtggaggtggtggatgtgaatgacaatgccccagag
ctggtggtcagttccttcagcagtcccctccccgagaacacagtgcccggcacagtggtt
gccctgttctcggtcagggaccgggattctggtgccaacgggaagatctcgtgtgccctg
gaggatcagctcctcttctccctgcggccagcctataagaattactacgagctggtgaca
gtgagcgcgctggaccgcgaggagacggctcagtacgtgctgagtgtcacagcagcagat
gcggggtcgcctcctctcacgaccacgcagaccttcaccgtggacgtctcggacgtcaat
gacaacgcgcccgtcttcaaccagacgtcctacaccatgtacgtgcgtgagaacaacgtc
cccacggtgtttgttggagcggtcagtgctgcagacgctgacgtggggctcaatgccaag
gtgacctattccctggccccagcgcaggcggcagagcggccccggtgctcctgcatctcg
gtgaactctgagaacggacacgtgtttgtgctgcggcccctggactacgagcacttgcgg
cagaccgaggtgacggtcgtggcctctgacgcgggctctcctccgctcagagccaacgtc
accgtgcgcctcgtcgtgctggacgagaatgacaacgcgccgctggtgctgtacccaggc
caggagagcggcgcggcgtccagcgagctggtgcccgtgtcggctgaggcgggctacctc
atcaccaaagtggtggccgtcgacgccgactccggccagaactcctggctctcctaccac
ctgctgagggccaccgagcccgggctgttcaccgtggctgcccaaagcggggaggtgcgt
ctcaggaggccggtgacagacagggacagcgtcaagcagaagctcgttgtcctggtccga
gacaacggccagcccccgctgtcagccaccgcagctctgagcgcgctgctgctcaaggac
ttctcagacgtgcgcctcccgcacagcagcgcggccacggaggagcaggacggctccctg
accacctacttaatcatctccctggtctttgtctcactcctcttcctcatctccgccgcg
gtctttgtggctcgcaaggtgtgcaggagaaaggagctgcaggccggccatgtgctgtat
ggtgccgacaacttgcagagcggcctggccgatgcagccgctgcagggaccctgccccgc
gcctactgctacgagatcagcctcacaacgggctcgggcaacagcgagttcaaattcctc
aagcccatcctccccagcctgccaccacagcactgtgccacgggccagggccctgaggag
ggacaggatttcccctgtgtccctgtcagcacagaggacatggcaccagacaatcctggg
actctctctgcgcgacagttcaacgctctttccttcgactag
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