Hirundo rustica (Barn swallow): 120759262
Help
Entry
120759262 CDS
T09369
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120759262 (SOX30)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120759262 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
120759262
NCBI-ProteinID:
XP_039934308
LinkDB
All DBs
Position
14:4535599..4542932
Genome browser
AA seq
621 aa
AA seq
DB search
MERRVRPCRFRARASPASPPRHREVVGPLGGLRVQVQEHPSQPGHSEGAAKRSRCISASA
AVEKEVRSAIRRERDQERGSGDRQTEENVLEQTGNIPWRRAAAQMERPNVAYEARPVRVE
NGDVPAGSLCELGNPPQDQNIAVLFQSLPSRSHIQLQGPLPSQLMHVPPVPVKPVPVQLQ
PVMQRPKVETKNIPLTVLPSDSGMPDTPFSKTKSGRVKRPMNAFMVWARIHRSVVAKANP
GANNAEISVQLGLEWSKLTEEQKQPYYEEANKIKLRHRQEFPGWVYQPNKKKCSPPGSAA
FSGTSQSTSTTNPAGSLPFSSPTYSFVNSNVSNSIGRPVCESPAIHLPASSIQHAGPVTF
FQTTAASTTSVAVAAPTLPLHPVVSSQHFAEPAHTEAFVSPGLNFSLRRPAPVFAESFSS
RNPSNISSTSGRFSASNSEIPGISVFPRGIALPQATPFIPSPAYVSAPIEQPAGLFGGTP
QFPFCHPSFIPGPHCFPSSTFPLRAPFGYGNFSSSVPPCFGFYEERNQRQEVIFSALDED
YRFRAYSEERLHENKHGYGSPEISSCQSTCSEERVLSPLPQLDVEVVEEVLPSPPSTPSS
TYIVNVTDSDEEEEVKFFQVL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcagggtcaggccctgccgcttccgcgcccgggccagccccgcctcgcccccc
aggcacagggaggtcgtgggtcccctcggagggctgcgcgtccaagtgcaggagcacccg
agccagcccgggcacagcgaaggagcggcgaagaggagcaggtgcatctcggcttccgcg
gcggttgagaaggaggtccggagtgccatcaggagagaaagggaccaagaaaggggcagc
ggtgaccgccagaccgaggagaatgtgctggagcaaactgggaatattccctggagaaga
gctgccgcccaaatggagcgacccaacgtggcttatgaggctcgcccagtgcgggtggag
aacggcgatgtcccggctggatccctgtgcgagcttgggaaccctcctcaagatcagaat
atcgcggtcttgttccagtccttaccttccaggtcccacatacagctccaaggccctctg
ccctcgcagctgatgcatgtgcctccagtgccggtaaaaccagtgccagttcagttgcag
cctgtcatgcagcggccaaaggttgaaacgaaaaacattcccctcacagtcctgccctcg
gattcagggatgccagacaccccgttcagcaagaccaaaagcggccgtgtgaagcgtccc
atgaatgcattcatggtgtgggcccggatccacaggtctgttgtggccaaagccaaccca
ggtgccaacaacgcagagatcagcgttcagctcggcctggagtggagcaaactcactgaa
gagcagaagcagccctattacgaggaagcgaacaaaataaaactgaggcacaggcaggaa
tttcctgggtgggtttatcagccgaacaaaaagaagtgttcaccacctggctctgctgcg
ttttcaggcacttcccagagtaccagcactacaaatccagctggcagccttcccttctca
tcacctacttactcttttgtcaactccaatgttagcaacagtattggacgtccagtctgt
gagtctcccgccatccatctgccggcttcttccatccaacacgctgggcccgtgaccttt
ttccagaccacggctgcgagcaccacatcagtggctgttgcagctccaaccctgcccctg
caccctgtggtttcatcacagcactttgctgaacctgctcacacagaggcttttgtgtca
cctgggctcaatttctccctgaggagacctgcacccgttttcgctgagagcttcagcagc
agaaacccaagtaacatcagcagcactagtggcaggttttctgcctctaacagtgagatc
ccagggatttctgtttttcctagaggcatagctcttccccaggctaccccttttattccc
tcacctgcctatgtgtctgctcccattgaacaaccagccggtttgttcggaggaactcct
cagtttccattttgccacccttcctttatacctggacctcactgtttcccctcaagcaca
ttcccactcagagctccatttggctacgggaatttctccagctcagtgcctccgtgcttt
ggcttttatgaagagaggaaccagaggcaggaggtgatattttctgctctggatgaagac
tatcgtttcagggcgtactcagaagagaggctacatgagaacaagcatggctatgggagc
cccgaaatttcttcctgtcagagcacctgcagtgaggagcgagttctgagccccctgcca
cagctggatgtggaagtggtagaggaggttttgccatcccctccatctactccctccagc
acttacattgtcaatgtaactgacagtgatgaggaagaggaggtgaagttttttcaagta
ttgtaa
DBGET
integrated database retrieval system
