Hirundo rustica (Barn swallow): 120759304
Help
Entry
120759304 CDS
T09369
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120759304
Cell adhesion molecules [BR:
hrt04515
]
Cadherins
Protocadherins
120759304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
120759304
NCBI-ProteinID:
XP_039934377
LinkDB
All DBs
Position
14:16084759..16089103
Genome browser
AA seq
852 aa
AA seq
DB search
MLGAAEDGGWLFWRVMACGRQSRDRKRQVILFILSVCVCQSGAETLRYSLPEEMERDSFV
ANIAKDLGVPLSQLAARKARVVSEGNEQLFRLDQNTGVLTAKESLDREEICPQSDTCTLV
FKIFFENPLQLIRGEVEVRDVNDNSPVFPEKEMVLKIIETASPGSRFPLESAQDKDVGIN
GLQNYSLGPNPHFSLDIGTAKDGVKYLELVLQRQLDREEQGELNLLLTATDGGSPPRSGT
AQVRIVVVDVNDNIPVFDREVYEVRLAENSPLEQLAVRVAAADPDEGSNGEVRYAFTQTS
ERSRQLFQLNRTTGEIRVVGNLDFEEAKSHKMVVKATDGAGLSAHCKVQVEVLDVNDNAP
EIALTSLTASIPEDAPPRTVVALFSVRDRDSGDNGRTECSIDGDLPFSLTPTFDNYYELR
TNTALDRERRAEYNITITATDWGTKRLSSREGIFVQISDVNDNPPEFTQEVYTMSVTENN
SPMLRIGRLKATDADEGKNARVNYALVRQEGKEQREVSVNAESGDVYILRPLDYEKVRSF
EVTVRAADGGSPPLSAQAVLRVVVRDENDNAPVLLHPAPDSSAAGELVPRWAPSGYLVAK
VVAVDADAGQNAWLSYELAKATEPALFRVGLHSGEVRTARAVTDRDAARHRLIVLVRDRG
QPPRSATATLAVVLTDGFSEAHLRVSEEAPAAEPDGPLTLYLIASLVCVSALFLATAVAA
AVAKVRRARRREAETLPTFPATTTESNAGSLPRSYVYDVCFAAGTVNSEFRFLRPLFPCF
PAGMPPGPGEQRSSVCSQDAANLGGEGGWIAAQGSAPLSEDAGPRAADAVSPANRELELN
VSSEQNPWLAHQ
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgctgggagccgccgaggacggtggatggcttttttggagagtgatggcgtgtgggaga
cagagcagagacaggaagaggcaagtgatcttattcattctgagtgtttgcgtgtgtcag
agcggggctgaaaccctccgctactctctgccggaggaaatggagagggattcctttgtc
gctaatattgcaaaggacctgggggttcctctgagccagcttgcggctcgcaaggcccgc
gttgtgtccgaggggaacgagcagcttttccgactcgatcaaaacaccggtgtcctgaca
gcaaaggaatcgctggaccgagaggagatctgtccgcagagcgatacctgcaccctcgtc
tttaagatattctttgaaaatccattgcagcttatccgaggggaggtggaagttcgtgac
gtaaacgacaactcgcccgtgttcccggagaaggagatggttttaaaaattatagaaaca
gcatctcctgggtcccgctttcccctggaaagcgcccaggacaaggacgtgggcattaac
ggtttgcagaactacagcctcgggcccaatcctcatttctccctcgatattggaacagcg
aaagatggagtaaaatacctggaacttgtcctacagcgccagctcgatcgtgaagagcag
ggagagctgaatttacttctcaccgccaccgacggggggtcaccacccaggtcgggcact
gctcaggtccggatcgtggtggtggatgtcaatgacaacatccccgtcttcgatcgggag
gtgtacgaggtgcgcctggctgagaacagccccctggagcagctggcggtcagagtcgct
gccgcggatcccgacgaagggtccaacggggaagtgcgttatgcctttacccagacatcg
gagcgatcccggcagctcttccagctgaaccgcaccaccggtgaaataagagtggtgggc
aacctggattttgaggaagcaaaatcccacaagatggtggtgaaagccacggacggcgcg
gggctttctgcgcattgcaaagtgcaggtggaggtcctggacgtgaatgacaacgccccg
gagatagcgctcacatccctcacggcctccattcccgaggacgccccgccacgcaccgtg
gtggctctgttcagcgtgcgggaccgggactccggggacaacggcaggacggagtgttcc
atcgacggggacttgccgttcagtctcacccccacttttgataattactacgaactgaga
acaaatacggctctggacagggagaggagggcggagtataacatcaccatcacagccacg
gactggggcacgaagcggctgagctctcgggaaggcatcttcgtgcagatatcggatgtg
aacgacaaccccccggagttcacccaggaggtttacaccatgtctgtcacggagaacaac
agccccatgctccggatcggcagactgaaggccacggacgccgacgaaggaaaaaatgcc
cgtgtgaactacgcgctggtgcggcaggagggcaaagagcagcgcgaagtgtcagtcaac
gctgaaagcggggatgtttatatcctccgccctctggactacgagaaggtgcgctccttc
gaggtgacagttcgcgcagccgacggcggctccccgccgctcagcgcccaggccgtgctg
cgcgtggtcgtgcgggacgagaacgacaacgcgcccgtgctgctgcacccggcccccgac
agcagcgcggccggagagctggtgccgcgctgggccccctccggctacctggtggccaag
gtggtggcggtggacgcggacgcggggcagaatgcgtggctgtcctacgagctggccaag
gccacggagccggcgctgttccgcgtggggctgcacagcggcgaggtgcgcacggcgcgg
gccgtgacagacagggacgcggcccggcacaggctgatcgtgctggtgcgggaccgcggg
cagccgccgcgctctgccactgccaccctcgccgtggtgctgacggacggcttctccgaa
gcccatttacgggtgagcgaggaggcaccggccgccgagcccgacgggccgctcactctt
tacctcatcgcctccctcgtctgcgtgtcggcgctgttcctcgccaccgcggtggccgcc
gcggtagcgaaggtgcggcgggccaggcggagggaggcggagactttgcccaccttcccc
gcgactaccacggagagcaacgcgggctccctgccccgcagctacgtgtacgacgtctgc
ttcgccgccgggaccgtcaacagcgagttccgtttcctcaggcccctcttcccctgcttc
cccgccgggatgccccccgggccgggcgaacagcggagctcggtgtgctcgcaggacgcg
gccaacctcgggggcgaaggcggctggatagcagcacagggcagtgctcccctctctgaa
gacgcagggcccagagctgcagatgcagtttcccctgcaaacagggagctggagctaaat
gtcagttctgagcaaaacccttggctcgcccatcagtaa
DBGET
integrated database retrieval system
