Hirundo rustica (Barn swallow): 120759434
Help
Entry
120759434 CDS
T09369
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120759434 (SH3TC2)
Membrane trafficking [BR:
hrt04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120759434 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
TPR_12
TPR_8
TPR_1
SH3_1
SNAP
SH3_9
TPR_7
TPR_2
DUF459
Motif
Other DBs
NCBI-GeneID:
120759434
NCBI-ProteinID:
XP_039934576
LinkDB
All DBs
Position
14:1756754..1777062
Genome browser
AA seq
1370 aa
AA seq
DB search
MDRLCPAAGGGGTGRVPPATPCGTPLGRLSGGGNVAGDPDASARPPCPPGEECESCWPRS
PELLPRWDRPGQWWWDTTAAPGTRPHPQGMAPGKAGVTEQSSPAPEAGPSSPDPSVVLLA
LRDSFPAEISLSFSVESRSSRGRNSQLQEAARKKLWALESDDRGVCALFKELSARLVCTL
AHEDRFLLTFKTLEEVWKFSTYLALGYVGTCLEQLLFAQDFWLDCALVEDTELRITVDEE
HLATIYMDLLLQEGNFFCRAVPGVWKSEQGGEEGLQLCRNELIHVKSVGQDSKWEGTSLL
TGQRGVVPAAALEPIPHPFYQWFLKNYPVGFGLSQEISGTSSQAIVKGRCIATKDHRGAA
WDELSFSKGDPIEIIGFFIPGLPWFVGKSLSTGSIGFVPTQHVNLEACEPLGKGFVFLSE
EEKPPVLHLPCSGDEQHFATLLGDLAHTDITSVYRLAGFEPSAVFPQAPPEAALHGSKEI
QVPQSWEEINDWATSSTSELSSPGSETAPATLEDVLLEKLDDLDYPKFFIDLNAGHMEDA
DVFDPILTFLNQDSFVPSFQSFYDLSFSFLHSTFYGFSDEDELVLYLETSRNWAKRTRSV
WAHVRLCFLLGKLCIKKVKFSQARVYFEEAMSVLDRGFGDLPLLAALHVSLASVYLKQNM
KHKFSSLLGKTLTLLLCLPGRSFSSENELELLTYVLRESIAVGNAPLEARICFLIAKLFL
QLGRTEEALPFLEHLQCLSTACLGPGARAGPLDAAATLGYLYDKKCLPNLALASARSFVP
SSAKGTPTPVWRAGFVLQNVSKLLGKRADGSGIPALACPYLKQALQFCRQSRAAATQRTL
CAVLSTLYLQHGARLDGAARYAARAAALGRLLGEEEAFESSLSLAWVHLLQQRPGAAGDV
LRRLRRSPRGSAGETQRGAAHNLLAMALGAQGRVQEAAESFLRALHKAKEAGSRRNQAVS
LANLGQLSLSCGAAQLAELYLLWSVRLYAELQGRREPDAELARVLLWLAQAAVDRRRTED
AKLCYELALGFALKWQDLRGQLRVTERLCHFYSGVCPDLRACITYQEHRASLARQLQDRE
LEGSAREALSQLYQALGTPDALRQSLDCTKQSLRIFIDLEEAAKAAEAWLQAGKLYYLLQ
EDELVEMYFQAAIQTALKGDNFSLAMDLYEKAGDTFFNGSRHRARAVEFYRGGAVPLARK
LKATQTELRLFNKLAELQISLQGYEKALEFATLAARLSLRVGDQLQELVAFHRLATAYDL
LRMYEMAEDCYLKTLAMRPPVLQSSAEALYYCKVYWHLGNLTLHQLKDEQDAATYFLLAL
AAAAELGDRELQALLRAKLGGIPGAPGGAEGAPGCATDRPRWLSEGGHVV
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggacaggctctgccctgctgctggcggaggtggcacgggcagggtcccccctgccacc
ccctgtggcacacccctcgggcgcctctcgggcggggggaatgtcgccggggatccggac
gcctctgcccgccctccgtgccccccaggtgaggagtgtgagtcctgctggccccgctcc
cccgagctgctgccccgctgggaccgcccgggacaatggtggtgggacacgaccgcggca
ccggggacccgtcctcatccccagggaatggcaccaggtaaggctggggtgacagagcag
agcagccccgctcccgaggcaggacctagctccccggacccctccgtggtgctgctggct
ctcagggacagctttccagcggagatctcgctctccttctccgtcgagagccgctcctcc
cggggccgcaattcccagctccaggaagctgccaggaagaagctgtgggctctggagagc
gatgacagaggtgtctgtgccctgttcaaggagctgtcagccaggctggtctgcacgctg
gcgcacgaggatcgcttcctcctcaccttcaaaaccctggaggaagtctggaagttttcc
acctatctggctttagggtacgtggggacctgcctggagcagctgctcttcgcccaggac
ttctggctggactgtgccctggtggaggacacggagctcaggatcaccgtggatgaagag
cacctggccaccatctacatggacctgctcctccaggaagggaattttttctgcagggca
gtgcccggcgtctggaagtcggagcaggggggagaggagggtctgcagctctgcaggaac
gagctgatccacgtgaagagcgtcggacaggattccaaatgggaagggacgtccctgctg
acggggcagcgaggcgtggtgcccgccgcagctctggagccgattcctcaccccttttac
cagtggttcctgaagaattatccggtgggttttggcctctcccaggagatcagcgggacg
agctcccaggccattgtcaaaggcaggtgcatcgccaccaaggaccacagaggagcagcg
tgggacgagctgagcttctccaaaggagaccccatagaaatcattggcttcttcatccct
ggactgccctggttcgtgggcaaatccctcagcaccgggagcatcggcttcgttcccacc
caacacgtaaacctcgaggcttgtgaacctctgggaaagggcttcgtgtttctgagcgaa
gaggagaagcccccagtcctgcacctgccctgcagtggggacgagcagcactttgccacc
ctgctgggggacctggcgcacactgacatcacctccgtgtacaggttggctggttttgaa
ccctcggccgtgttccctcaagcgccaccggaggctgctctccacggcagtaaagaaatc
caagtgccccagtcctgggaggaaatcaacgactgggctaccagcagcacctcagagctg
tccagcccaggcagtgaaacagcccctgccacactggaagatgttctcctggagaagctg
gacgacttggattatcccaaattcttcatcgacctcaacgctggacacatggaggacgct
gatgtcttcgaccccatattgaccttcctcaaccaagacagttttgtgcccagttttcaa
agcttttacgacctcagcttctcctttctccactccaccttttatggtttctctgacgag
gatgaactggtcctgtacctcgagacttcccggaactgggccaagaggactcgttctgtt
tgggctcacgtcaggctctgtttcctcttgggtaagctctgcatcaaaaaggtgaagttc
tcccaggctcgggtgtactttgaggaagccatgagtgtcctggacaggggctttggggac
ctgcccctgctggcagcgctgcacgtcagcctcgcctccgtctacctgaagcagaacatg
aagcacaagttctcctccctgctggggaagacgctgaccttgctgctgtgcctgcccggc
cgctccttcagctcggagaacgagctggagctcctgacctacgtcctgagggaatccatc
gcggtgggcaacgctccgctggaggcacggatctgcttcctcatcgccaagctcttcctg
cagctgggcagaaccgaggaggcgctgccctttctggagcacctccagtgcctcagcacc
gcctgcctcggcccaggcgcccgcgccgggccgctggacgccgctgccaccttgggctac
ctctacgacaagaagtgcctgccgaacctcgcgctggcctctgccaggtcctttgttccc
agcagtgccaaggggacgccgacccccgtctggagagccggcttcgtcctccaaaacgtt
tccaagctgctggggaagcgggcggacgggagcggcatcccggcgctggcttgtccgtac
ctcaagcaagcgctgcagttctgccgccagagcagggccgcggccacgcagaggacgctc
tgcgccgtcctgtccacgctgtacctgcagcacggggcacggctggacggggcggctcgt
tacgcggccagggccgccgccctgggcaggctgctgggcgaggaggaggcgtttgagtcc
tcgctgtccttggcgtgggtgcacctgctgcagcagcggccgggcgcggccggcgacgtc
ctgcggcggctgcggcgctccccgcgcggctcggccggcgagacccagcgcggggccgcg
cacaacctgctggccatggccctcggggcccagggccgcgttcaggaggccgcggagagc
ttcctgagggccctgcacaaggccaaggaggcgggcagcaggaggaaccaggccgtgtcg
ctggcgaacctgggccagctgagcctctcgtgcggggcggcccagctggccgagctctac
ctgctgtggtcggtgcggctctacgccgagctgcagggccgccgggagccggacgcggag
ctggcacgggtgctgctgtggctggcgcaggccgccgtggacaggcggaggacggaagat
gccaaactctgctacgagctggcgctggggtttgccctgaagtggcaggacctgaggggc
cagctgcgcgtcacggagcgtctgtgccacttctacagcggagtgtgccccgacctgcgg
gcctgcatcacctaccaggagcaccgggcgtccttggcgcggcagctgcaggacagggag
ctggagggcagcgccagggaagccctcagccagctctaccaggctctgggcactcctgac
gctttgagacaatccctggactgcaccaagcagagcctgaggatcttcatcgacctcgag
gaggctgcgaaggcggcagaggcctggctgcaggcaggaaagctctattaccttctgcag
gaggatgagctggtggaaatgtacttccaggcagccatccagaccgctctgaaaggggac
aacttctccttggccatggatctttacgagaaagcgggtgacaccttctttaatggcagc
cggcacagggcccgggcagtggagttttacaggggaggtgctgtgcccctggccaggaag
ctcaaggccacccagacagagctgcggctgttcaataaactggcagagctgcagatcagc
ctgcagggctacgagaaggctctggagtttgccacgctggcagccaggctcagcctcagg
gtcggggaccagctgcaggagctggttgccttccaccgcctggccaccgcctatgacctg
ctgcgcatgtacgagatggccgaggattgctacctgaagaccctggccatgcgtcccccg
gtgctgcagagctccgcagaggccctgtactactgcaaggtctactggcacctgggcaac
ctgaccctgcaccagctgaaggatgaacaggacgcggccacctacttcctgctggccctc
gccgcggccgccgagctgggagaccgggagctgcaagctctgctccgtgccaagctgggt
gggatccccggagccccgggaggggctgagggtgcgccaggctgcgccacggaccggccc
cggtggctgagcgagggtggccacgtggtgtga
DBGET
integrated database retrieval system
