Hirundo rustica (Barn swallow): 120759448
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Entry
120759448 CDS
T09369
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120759448 (RBBP6)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120759448 (RBBP6)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
U-box type E3
120759448 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
120759448
NCBI-ProteinID:
XP_039934613
LinkDB
All DBs
Position
15:15806781..15834932
Genome browser
AA seq
1791 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETTFRSRSEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQQQQQQ
LPPPPPPPPPPLMRQTITRTLQPLMRPALARQQDPLMIPLASLASRSALSSLGPGPSMAA
GLPVNPSSVVVSDLPPAVSLSLRGEKPDGPFRDADAVLPPALMTAAELSKSSPLSISSLL
EEKGYQVPVLRQPAIPSLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQ
APSLPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYPVPPPGYP
PAPANMSSAWVPTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDF
AKELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSR
SYSRSPPYQRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPSKRAV
PQSDAEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAV
GAQPRPPVNRENFSPERFGPPGTRRENSPYARGRREEYPAGQSHRNRNVAGNYPEKPGRE
SHGIKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNVELLEGARKPREPVPA
EDAKADSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKVEKTKRKIEAA
AAPKKDNASKPPKASQEKADPDREKSPRTEPPVKKVKEELPKTDSVKTSSSQKDEKALGT
PRKAHPKVAKDHPETRPAKEEKAKKEHPKEAKAEKPSSKEDKSKKTAEKSKLSDAKLEKR
KRKAEEKVDKEHEATSAKASKAETAESKTSPKGKAEPEGEKGERTPEKDKAAFLNNPSKK
IKLNRETGKKIVSGENVPPGKEAVEKPEPSSSKVKAEKAKGKARRKVTAADGASSTLVDY
TSTSSTGGSPVRKPEEKTDTKRTVIKTLEEYNNDITAPAEDVIIMIQVPQSKWDKDDFES
EEEDIKSTPQVPPTVGKPTSVIKPVSAKAPNPVKHTEKETEPLEKTQKAAKEASYESIQH
DAKSSKSSMLSEKGKTKDRDHSLSDKDSSEKRKSSVQPEKEHSERAAEQGNGKTVSQSSK
DGRSSEKHDSGRGSAAKDFTPNRDKKSDHDGSREHSSSKRRDEKSESARRKDSPSRIRDS
AAAQKSKPREERVEPAKKGPAEAKRSSYSPPRERKPAEHKAVHDPKRPAEEHKPPDKNPG
KEKEKEKEKEKHVPEVKSNKEKEPGGNKPPVKQDSPEDRVEKENVAGQSDKGAAKPKPPP
SSAARLSSDLTRETDEAAFVPDYNESDSESNVSAKDEEAAGKTPKEAKEKAVDKVKEEAA
APAPAEQPEVGRSQSQSSPSVSRSRSHSPSESQTRSHSSSASSGESQDSKKKKKKKEKKK
HKKHKKHKKHKKHVGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcattacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctgcacatctccctgagcgacctcaagcgccagatcatgggccgggagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagaatacaccgatgat
agcgctctgattcccaagaactcatcggtgattgtgaggagaatccccattggaggagtg
aaagcaaccagcaaaacatatgttatgactcctaaatcgcacaaaatcctagaaactact
ttcagaagtcgaagtgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgag
gaggataaaataaaagctatgatgacacagtctggccatgaatatgatccagtcaattac
atgaagaaacccgtggggccacctccaccctcgtacacctgctttcgctgtggcaaacct
gggcactacataaagaactgtccaacaaatggggacaaaaatttcgagtccgttcccaga
attaaaaaaagcacaggaattccaagaagttttatgatggaggtgaaggaccccaacaca
aagggtgccatgctgaccaacactgggaaatacgcaattccaaccatagatgcggaagct
tatgctataggaaaaaaagagaagcctcccttcctacctgaggagccgtcctcctcttca
gaagaagatgatcctattccagatgagctcttgtgtctcatttgtaaggatataatgacg
gatgcggttgttattccctgctgtggaaacagttactgtgatgaatgtattagaacagca
ctactggagtctgaggaacacacatgccctacctgccatcagacagatgtttctcctgat
gctttaatcgccaacaagtttctgcgccaggctgtcaacaacttcaaaaatgaaaccggt
tacacaaagcggctccgtaagattcagcagcagcagcagcaacagcagcagcagcagcag
ctgccgccgccgccgccgccacctccgccaccgctgatgcggcagacgataacgcgcacg
ctgcagccgctgatgcggccagccctggcccggcagcaggacccgctcatgatcccgctg
gcctccctggcttcccgctccgccctctcctccctgggccccgggccgtccatggcagct
gggctgccggtcaatccgtcttctgtggttgtctctgatctccctccagcagtgtccctc
tctctccgtggggaaaagccagatggaccttttcgtgatgccgatgctgttttgcctcct
gctctgatgactgctgctgagctttccaaatcatcccctttgtcaatcagcagtttgttg
gaagaaaagggctatcaggttcctgtactgagacaaccagcgataccaagtcttctgggc
cctcaaggacaatcaatacccacaactggtcatccaatgagagctggtgcacttcgcagg
ccaggctgggaactttcaaatcgaggacgcccgcacagtgaccgtgcccaaaggactcag
gccccatcactgccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtat
cctccaccaccccatgctcttcctcttcctccgggggtaccaccaccacagtttcctcct
cagtttccacctgggcagcctccatccgctgggtaccctgtcccccctcccggatatccc
ccagctcctgcaaacatgtcatcagcttgggtcccaacagcagtgccagcggctcattca
aacaccatcccaacgacacaagcacctcctctctctagggaggagttttacagagagcaa
cggaggcttaaagaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgatttt
gctaaggaattgatggaatataaaaagattcaaaaggagcgtaggcgttcattttccagg
tccaagtctccctatagcgcttcatcttactctagaagctcgtacacctactccaagtca
cgctcaggttcgtcgcgctcccgctcctactcgcgctcctttagccgctcccattcccgc
tcctactcgcggtcgccgccgtatcagagacgaggcaaagggaagagtcggaactaccgc
tcccgctcacggtcccacggctaccaccgctcccgctcgcgctcgcccccataccggcgc
taccactcccgctccaggtctccggtgttccgtggccagtcccccagcaagcgcgcggtc
ccgcagagtgacgccgagcgcgagtacttcaaccgctacagagaggtgcccccgtacgac
atgaaggcttactatggccgctcggtggacttcagagacccctttgagaaggagaggtac
agagagtgggagaggaactacagagagtggtacgagaagttttacaagggctatgccgtg
ggcgctcagccacggcctccagtgaacagagagaacttctctcccgagaggtttggcccg
cctgggaccagacgagagaattcaccatatgctcggggacggagggaggagtatcccgct
gggcagagccataggaatcgtaatgtagctggaaactaccctgaaaagcctgggagagag
agccatggcatcaaagatcctacaaaatcaaaagagaaggaggtggaaaatccactggga
gatggcaaaggcaataaacataaaaaacaccggaagagaagaaaaggggatgagaatgaa
gggtttcccaacgttgagctgttagaaggggcaagaaaaccaagagagccagttccagca
gaagatgctaaagcagactctctgttcatgctgccaagcagggatgatgccacccctgta
agggatgagcccatggaagcggattccattgctttcaaaccagtgtctgaaaaggagaaa
aaagagaaggataagccaaaagccaaggttgagaaaacaaagcggaaaatagaagcggcg
gctgctccaaagaaagacaacgcatcaaaaccacctaaagcttcccaggaaaaggcggac
cccgatcgcgagaaatctcctcgaacggaaccccctgtgaaaaaagtcaaggaagagctg
ccaaagacagacagtgttaaaacctcttcttctcagaaggatgagaaggctcttggtaca
ccacggaaggctcatcccaaagtggcaaaggatcacccagaaaccagaccagccaaggag
gagaaggcaaagaaggaacatcctaaagaagccaaggcagagaagccctccagcaaggag
gataaatcaaaaaaaactgctgagaaaagcaaactttccgatgccaaacttgagaaaagg
aaaagaaaagcagaggaaaaggttgataaagaacatgaagccacttctgcaaaggcctct
aaagccgaaactgcagaatcgaaaacatcgcccaagggaaaggctgagcccgagggggag
aaaggagagcggacaccagaaaaggataaagctgcttttcttaacaacccgtccaaaaag
atcaaacttaatcgagaaactggaaaaaagattgtgagcggagaaaatgtgccacctgga
aaagaggctgtggagaaacctgagcccagcagcagcaaagttaaagcggaaaaggcaaag
ggaaaagcaaggaggaaagtgacagcagctgacggcgctagctcgactcttgtggattac
accagcacaagttccactggaggaagccctgtcaggaagcctgaggagaagacagacacc
aaacgaactgtcattaagaccctggaggagtataacaatgacattacagcccctgctgag
gatgtcattatcatgatccaggtccctcagtccaagtgggataaagatgactttgagtct
gaagaggaagacatcaaatccaccccccaggtgcccccaactgtaggaaaacccaccagt
gttatcaagcccgtgagtgcaaaggcaccaaaccccgtcaaacacactgaaaaggagaca
gagcctctggagaaaacacagaaagctgcaaaagaggcgagttacgaaagcatccaacac
gatgccaagagttcaaaaagttccatgttgagtgaaaaaggtaaaaccaaagacagggat
cattctttgtcagacaaggacagttctgagaagaggaagagcagtgttcagcctgaaaaa
gagcactcagaacgtgcagctgaacaaggaaatggaaaaactgtatctcagtcttccaaa
gatgggagatcttcagagaagcacgatagtggccgtggctccgctgcgaaggacttcact
cccaaccgagacaagaagtccgaccacgatggcagcagggagcattcgagttccaagcgc
agggatgagaagagcgaatcggcgcggaggaaagactccccatcccggatcagagactcc
gcagcagcgcagaagagcaagccaagagaggagcgcgtggagccagccaagaagggccct
gcggaggccaagcggagcagctacagccccccgcgggagcgcaagcccgccgagcacaaa
gccgtgcacgaccccaagcgccccgctgaggagcacaaacctccggataaaaacccaggc
aaagagaaggagaaagagaaagagaaggagaaacacgtaccggaagtcaagagcaataag
gagaaagagccgggtgggaataaaccgccggtgaaacaggactcgcctgaggatagagtg
gagaaggagaacgtggcgggtcagagcgataaaggcgcggcgaagccgaagccgccgccg
agcagcgccgcgcgcctctcgtccgacctgacccgcgagaccgacgaggccgccttcgtg
ccagactacaacgagagcgacagcgagagcaacgtgtctgcaaaggatgaggaggctgcg
gggaaaacgcccaaagaggcgaaggaaaaggccgtggataaggtgaaagaggaggcggcg
gccccggctcccgccgagcagcccgaggtgggcaggagccagagccagagcagccccagc
gtcagccgcagccgcagccacagcccctctgagagccagacacgcagccacagcagcagt
gccagctcaggggagagtcaggacagcaagaaaaagaaaaagaaaaaagagaagaagaag
cataagaagcacaagaaacacaagaagcataagaaacacgtgggaaatgaaacagaattg
gaaaagagccaaaaacacaaacacaagaagaaaaaatcgaagaagagcaaagataaagag
aaagacgaccaaaaagtgaaatctgtcacgacataa
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integrated database retrieval system
