Hirundo rustica (Barn swallow): 120759478
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Entry
120759478 CDS
T09369
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03015
mRNA surveillance pathway
hrt05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120759478 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
120759478 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120759478 (CPSF4)
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120759478 (CPSF4)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120759478 (CPSF4)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120759478 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
120759478
NCBI-ProteinID:
XP_039934708
LinkDB
All DBs
Position
15:13434553..13440512
Genome browser
AA seq
243 aa
AA seq
DB search
MQELIASVDHITFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMHPRFELPMGTTEQPP
LPQPTQTQQKRTPQVIGVMQSQNNNSGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFL
SGQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagctcatcgccagcgtggaccacatcacgttcgacctggagctggccgtggag
cagcagctgggggcacagccgctccccttccctggcatggacaagtcgggcgcagctgtc
tgtgagttttttttaaaggcagcatgtggaaaaggaggcatgtgcccgttccgacacatc
agtggggaaaagacagttgtttgtaaacactggctacgaggactgtgcaaaaagggagac
cagtgcgagttcctgcacgagtatgacatgaccaagatgcccgagtgttacttctactcc
aaatttggggaatgcagtaacaaggaatgtccattcttgcacattgacccggagtcgaag
atcaaagactgtccctggtatgacagaggcttctgtaaacacggtcccctgtgcagacat
cggcacactcggagagtcatttgtgtgaattacctggtgggattctgtccagaggggcct
gcctgtaaattcatgcaccctcggtttgaactgccaatgggaaccacagagcaaccacca
ctgcctcagccaacacaaacacagcaaaagaggacaccccaagtcattggagtcatgcaa
tctcaaaataacaacagtgggaacagaggaccccggccgctggagcaggtcacctgctac
aagtgtggtgaaaaaggtcattatgccaacagatgcaccaaaggacacctggcctttctc
agtggacagtga
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