Hirundo rustica (Barn swallow): 120759531
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Entry
120759531 CDS
T09369
Symbol
CASKIN1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120759531 (CASKIN1)
Membrane trafficking [BR:
hrt04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
120759531 (CASKIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
Caskin-Pro-rich
Caskin1-CID
SAM_2
Caskin-tail
Ank_3
SH3_2
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
120759531
NCBI-ProteinID:
XP_039934816
LinkDB
All DBs
Position
15:complement(15446051..15474933)
Genome browser
AA seq
1541 aa
AA seq
DB search
MGKDQELVQAVKAEDIAAVQKLLQRPKPGKAKLLGSAKKVNVNFQDTDGFSALHHAALNG
NTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGKKEPMKMVLKAGSSVNIPSDEGQIPLH
LAAQHGHYDVSEMLLQHQSNPCIMDNSGKTPLDLACEFGRVGVVQLLLNSNMCAALLEPK
PGDTTDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKAGTALHEAALCGKTDVVRLL
LDSGINAHVRNTYNQTALDIVNQFTTSQASKEIKQMLRDASAALQVRAVKDYCNNYDLTS
LNVKAGDVITVLEQHADGRWKGCIHDNRTGNDRVGYFPSSLVEAISKRTGSWETVTIPQH
FQKIPLPAYGAAVLNGDASSHPFHSLPPPPPPPPHSHQTLFSSFGYHRLSPSSADEPRYG
QGSRGADMSPSHLSPSQGGSTPAPAEEIWVLRKPFAGGDRSSLGSTGSVASARSSGSGQS
AGSGAHALHAGSEGVKLLATVLSQKASAQESAVGDGPAKAQDIPAGSSRSQSVASSPYAP
QPPAEPQLKKMEPPSEGKSSEAVYQWLCKFQLQLYAPNFINAGYDITTISRMTPEDLTAI
GVTKPGHRKKIASEINNLSIPEWLPEYKPANLALWLSMIGLSQYYKVLVENGYENIDFIT
DITWEDLQEIGITKLGHQKKLMLAVKKLAELQRAELGKYEPGTLKRKASGPCPEVLAIES
PPPEPPECQSPKMTTFQDSELSSELQVAMTGEAPEEAPEKAANPAAPGYRSPPALGGRAR
LMSSSQELLGDGPRGPPAAAISKSQEYLAEGAGESPPAPPKESRPPRHGHPVKRASVPPV
PGKPRQPFPASAGQLTPPQTPGKARPSSPQGPAGPHATAKVKPTPQLLPPGERPASPRSL
PQSPTHRGFAYVLPQPAEGEAAPPGVPVPPVSVPVLCLPPAGEGEEEPGRPKKRAHSLNR
YAASDSEQERDELLVPDAGPYATVQRRVGRSHSVRAPAGGDKNVNRSQSFAVRPKKKGPP
PPPPKRSSSAISSAGMAEDFPKEGEGEAAAGAPSAEGRREQRRASDLGGSVDTGSAGSVR
SIAAMLEMSSIGGGARALALQKPHVAAGPGPGPAKAAEGYYLQPGPPPGSPDRARVATVL
ATVKHKEAIGLDGEVVNRRRTISGPVTGLVAAARRERTDGVRSEAAADGPGERLRVERGG
SPDGIPFAEDGTLTIKQRPRPLGPARGETGEGLSPAHRHGDLAKVEASATLKRRIRARQS
QQDGVRFVLTESDTVKRRPKAKDKEPALEPAALAVYQNGTSTVKRRPASELSGAEPPHTP
PPAARPDGPEFAPPPAEPKKPFKPPVSPKPVLTQPPQKMPGPPVPVPKKVPIPSPGSPEV
KRVHGTPPPVSPKPTPPPTAPKPPKPHAAIQSVSAGSTPAPSPARQLSPAAKPSSTPPSL
CSSPAKPLSPGAQPQQVPVKPPRSTIASPSVDSAGPELAQQKLEETSASLAAALQAVEEK
IKQEDSQAADSAVESKSTVSILDDIGSMFDDLADQLDAMLE
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaccaggagctggtgcaggcggtgaaggcggaggacatcgcggccgtgcag
aagctgctgcagaggcccaagcccggcaaagccaagctcctgggatcggcaaagaaagtc
aatgtcaacttccaagacaccgacgggttctcggctctgcaccatgcggcgcttaacggc
aacacggagctcatctcgctgctgctggaggcgcaggccgccgtggacatcaaggacaac
aaaggcatgcggcccctgcactacgcggcctggcagggcaagaaggagcccatgaaaatg
gtgctgaaggcaggctcctctgtgaacatcccgtcggacgaggggcagatccccctgcac
ctggcggcgcagcacgggcactacgacgtgtcggagatgctcctgcagcaccagtccaac
ccctgcatcatggacaactcggggaagactcccctggacctggcgtgcgagttcggccgc
gtcggggtggtgcaactgctcctgaacagcaacatgtgcgcggcgctgctggagcccaaa
ccgggggacaccaccgaccccaacggcaccagcccgctgcacctcgccgccaagaacggc
cacatcgacatcatccggctcctgctgcaggctggcatcgacatcaaccggcagaccaag
gcgggcacggcgctgcacgaggccgctctctgcggcaaaacggacgtggtgcggctgctg
ctggatagcgggatcaacgcccacgtcaggaacacctacaaccagacggctctggacatc
gtcaaccagttcaccaccagccaggccagcaaggagatcaagcagatgctgcgggatgcc
tccgcagccctgcaggtccgggccgtcaaggactactgcaacaactacgacctgaccagc
ctcaacgtgaaagccggcgacgtcatcaccgtgctggagcagcacgcggacgggcgctgg
aagggctgcatccacgacaaccgcaccggcaacgaccgcgtgggctacttcccctccagc
ctcgtggaggccataagcaaacgaacaggttcatgggagactgtaacaatcccccaacac
ttccaaaagatcccgctcccggcttacggggctgctgtgctaaacggtgacgcctcgtcc
catccgttccattccctgcctccacctccacctccaccaccacattcccatcagactctt
ttcagttcctttggctatcacaggctctcccctagcagtgccgacgagccgcgttacgga
caagggtcccgcggggccgacatgagcccgtcccacctgtcgccgtcgcagggcggatcc
acgccagcccccgccgaggagatctgggtgctgcggaaacccttcgcaggtggtgaccgc
agcagcctgggcagcacgggcagcgtggcctcggcgcgcagctcggggagcgggcagagc
gcgggcagcggggcgcacgccctgcacgccggctccgagggcgtcaagctgctggcaacg
gtcctttcccagaaggcttctgcgcaagagtctgccgtgggcgatgggccggccaaggcg
caggacatccccgcaggttcgtcgcggtcgcagagcgtggccagctccccgtacgccccc
cagccccccgccgagccccagctgaagaaaatggagcctccatcagaggggaagagctcg
gaggccgtgtaccagtggctctgcaagttccagctgcagctctacgcgcccaacttcatc
aacgccggctacgacatcaccaccatcagccggatgacgccggaggacctcacggccatc
ggggtcaccaagccggggcacaggaagaagatcgcctccgagatcaacaacctcagcatc
cccgagtggctgcccgagtacaaaccggccaacctggcgctgtggctctccatgatcggc
ctgtcccagtactacaaggtgctggtggagaacggctacgagaacatcgacttcatcacc
gacatcacctgggaggacctgcaggagatcggcatcaccaagctgggccaccagaagaag
ctgatgctggcggtgaagaagctggcggagctgcagcgcgccgagctgggcaagtacgag
ccgggcacgctgaagaggaaggcgtcggggccgtgcccagaggtgctggccatcgagtcc
cccccgccggagccgcccgagtgccagtcgcccaagatgaccaccttccaggacagcgag
ctcagcagcgagctgcaggtggctatgacgggagaagcccccgaggaggcccccgagaag
gcggcgaaccccgcggcccccgggtaccgctcgccgccggcgctgggcggccgcgcccgg
ctgatgagcagctcgcaggagctgctgggggacggcccgcggggcccccccgccgccgcc
atctccaagagccaggagtacctggcggagggggccggggagagcccccccgcgccgccc
aaggagagccgccctccccggcacggacaccccgtgaagcgcgccagcgtgccgccggtg
cccggcaagccccggcagcccttcccggcctccgccgggcagctgacgccgccgcagacc
cccggcaaggcgcgaccctcgtccccgcaaggcccggcgggcccgcacgccaccgccaag
gtgaagcccaccccgcagctgctgccgcccggcgagcgcccggcgtcgccccgctccctg
ccccagtcgcccacgcaccgcggcttcgcctacgtcctgccgcagcccgccgagggcgag
gcggcgccgcccggggtgcccgtcccgcccgtctcggtgcccgtgctgtgcctgccgccg
gcgggcgagggcgaggaggagccgggcaggccgaagaagcgggcgcacagcctgaaccgc
tacgccgcctcggacagcgagcaggagcgggacgagctgctggtgccggacgcggggccc
tacgccaccgtccagcgccgcgtgggccgcagccactcggtgcgggcgcccgcgggcggc
gacaagaacgtcaaccgcagccagtccttcgccgtccgccccaagaagaagggacccccg
ccgccccctcccaagcgctccagctccgccatctccagcgccggcatggccgaggacttc
cccaaggagggtgagggcgaggcggccgcgggagccccgagcgccgagggccgccgggag
cagcgccgggcgagcgacctgggcggcagcgtggacacgggcagcgccggcagcgtgcgc
agcatcgcggccatgctggagatgtcctccatcggcggcggggcccgggcgctggcgctg
cagaagccgcacgtggcggccgggccggggccggggccggccaaggcggccgagggctac
tacctacagcccgggccgcccccgggcagccccgaccgcgcccgcgtggccaccgtcctg
gccaccgtcaagcacaaggaggccatcgggctggacggggaggtggtgaaccggcgccgg
accatcagcggccccgtcaccgggctggtggcggccgcccgccgcgaacgcaccgacggc
gtgaggtcggaggcggccgccgacggccccggcgagcggctgcgggtggaacgcggcggc
tcccccgacggcatccccttcgccgaggacggcaccctcaccatcaagcagcggccgcgg
cccctggggccggcccggggggagacgggcgaggggctgtccccggcccaccgccacggg
gacctggccaaggtggaggccagcgccacgctcaagcggcgcatccgggccaggcagagc
cagcaggacggcgtccgcttcgtgctcaccgagtccgacaccgtcaagcgccggcccaaa
gccaaggacaaggagccggcgctggagccggccgcgctggccgtgtaccagaacggcacc
agcaccgtgaagcggcggccggcctcggagctgagcggggctgagccgccgcacacccct
ccgcccgccgcccgtcccgacggccccgagttcgccccgccgcccgccgagcccaagaaa
cccttcaagccgccggtgtcccccaagcccgtgctgacgcagccgcctcagaagatgccc
gggccgccggtgcccgtccccaaaaaggtgcccatcccaagccccggcagcccagaggtg
aagcgggtccacggcacgccgcccccggtgtcccccaagcccacgccgccccccacggcg
cccaagccccccaagccccacgccgccatccagtcggtgagcgccggctccacgccggcc
ccgtcgccggcccggcagctgagccccgcggccaagccctccagcacgccgccctcgctc
tgctccagccccgccaagcccctgtcgcccggcgcgcagccccagcaggtgcccgtgaag
ccgccgcgttccaccatcgccagcccgtccgtggacagcgccggccccgagctggcgcag
cagaagctggaggagacgagcgcgtccctggccgcagcgctgcaggccgtggaggagaag
atcaagcaggaggacagtcaggcggcagactccgccgtggagtcgaagagcaccgtgagc
atcctggacgacatcggcagcatgttcgacgacctggcggaccagctggatgccatgctg
gagtga
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