Hirundo rustica (Barn swallow): 120759549
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Entry
120759549 CDS
T09369
Name
(RefSeq) WD repeat-containing protein 90 isoform X1
KO
K24759
WD repeat-containing protein 90
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hrt03037
]
120759549
Cilium and associated proteins [BR:
hrt03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120759549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CFA20_dom
ANAPC4_WD40
NBCH_WD40
RAB3GAP2_N
WDR54
Nup160
Coatomer_WDAD
Motif
Other DBs
NCBI-GeneID:
120759549
NCBI-ProteinID:
XP_039934858
LinkDB
All DBs
Position
15:complement(1661632..1705773)
Genome browser
AA seq
1826 aa
AA seq
DB search
MTPVLAAWQRPYLNIFKHFRVEEWKRSAKEGDVAALTDTRLKGTIYRIRGSNPASSYLQL
PRAGTQSLGLTGRYLYLLFRPLPHKHFLVHLDVATEENQVVRISFSNFFKEFKSTATWLQ
FPFVCGAASEGTARRGAPGAAPADVRWTCLVLDLPSILALYLSRRYSHLRGVKLCSNLLV
KNLCTSDLLFEPGVTLAEARLGDLCCRGVAPMPRELAFPVPKGKKWHDLYDYIRFPCQGA
KLLHNSIQKNFPSPVAGDQVPEEPGCPLATLSRAVCDRLSLVQQITSPKGVPHRCPVITK
NIPEVHLAVPGPPRAVPAGDPVLEEEQRLHGAGDTRQPLPPHDGGIHVYAYQRGGQTTRA
VPGSEEGLVPDPILKLRAIIGFGGCSTKWALWTRDSTAVVYPCHAVIVALLLKTGEQRFF
LGHTEKVSVLALSGSSSLLASAQAGPRSVGRLWDFPTGTCLCLFKTSLQSLVSLSFSHSG
AVLCGVGEDVHSKTMVVVWSTAQVTHGGGVTVLAKAHTDVDIRAMKIAFFDDTRMVSCGR
DNIRLWRVRSGALRSCPVALGEYHSLDFTDLAFQERPEQEPEDHVLFVCSRSGHVLEVDY
ENVCVRSARRLLPAQPQGDGQEQAGSSSGPGIAINSISMSSTFCATGSEDGYIRLWPLDF
SAAILEAEHESSVSSVCISPDSHKVLSTTATGNLGYLDVQARDYNTLMRSHKGSVLGFSV
EGKWEQIATVSQDNTIRVWDLASRQQLYDFSAAEETPCTVAFHPLWKMLACGFDSGVVRV
FSLAASDLLLEHKQHRTAITGLTFSPDGNLMFSSCLQGTLALYRFVAQKTQVLRVLGNVV
ARDAGSGVDTLVLSGDSRLLAFVGPSKYVVTVMEACSLDELLRVDISILDLQSTVLDSAV
RVCFGPVPQGELLVSTASSKILVLDAKTGRLVREVSPVHKLTCSSLALSKDGQYLLTAGD
KVIKVWDYRMRFHINFQVFIGHSEPVHQVAFTPDQEHVISVGDAIFLWDFLAPPPVRSSP
ARAHSSVSTLPLRSDSSSEKPKDVSETPRQTVPLPLLSSPPCLDISSVHPAGFQSIFSES
DREEEADLPDSSRKVANGHKDSSVLVVESDGNEEPVVRSKVRQESSRSPGKPGNEPRKGS
RTPKSQCSVRPDSYRHFTARFKASVLPQSFLSAPAGSEVLKLKAVIGYNGNGRGNMVWNP
DTGFFAYSCGCVIVVEDLHSGSQKHQLGHAEEISTLALSHHAQVLASASGKKDGDSHCQI
CIWSTQDGACTAELFHHETQVQAMAFSCDDKFLVTIGDYSDQTMALWSTHTYELLLSTRI
SEPLHDVAFSPGSHQDLACVGRGAVMFWLLEQQGAAVSLKVHRAPAPDVLGLVELTSLCY
GADTLLYSGTNSGQICVWDTETKSCFMTWEADEGEIGVLVCRHNRLVSGSNTKRIRLWSV
ATVQELRLKGPDARSGSVLLEHEITLDGTIVSAAFDDSLEMGIVGTTAGTLWYINWVEST
SIRLISGHKNKVTEVCFSPDESHCATCGEDGSVRVWALGSTELVVQFQVLNQSCQCLAWK
PRPAGVWPCPGESQHVVAGYSDGTVRVFSVSRTEMELKMHPHTAALTAITYSTDGEMILS
GGKDGTVAVSSPRTGMTIHVLAEHKGSPITVLQCTRKQYHDFGVQGGELWLATSSDRRVS
VWASDWLQDKCELLDWLSFPAPAGPEGLDSLPPSLAAFCPWEHGVLVYVGFGLQKEALFY
SLRKKQVLRKISLPAFATSLSLSPAAPFMAIGFDDRLLRLQPCPAGAPQDYAGHDDTVHF
CRFAPSGRRLLSASHSAVLVWELTGA
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgacaccagtgctggcagcctggcagcgtccctacctcaacatcttcaagcacttccgt
gtggaggagtggaagcgctctgccaaggagggggacgtggccgccctcacggacacgagg
ctgaagggaacaatctaccggatccgaggctccaacccagccagcagctacctgcagctg
ccacgggcagggacacagtccctggggctgacagggcgctacctctacctgctcttcagg
cccctgccccacaagcacttccttgtgcacctggatgtcgccaccgaggaaaaccaggtg
gttcgtatctccttctccaacttcttcaaggaattcaaatccactgccacctggctccag
ttcccctttgtctgtggagcagccagcgagggcacggcccggcggggtgcccccggagca
gccccggctgacgtgcgctggacgtgcctggtgctggacctgccctccatcctggccctg
tacctgagccgcaggtacagccacctcaggggggtcaaactctgctccaacctgctcgtg
aaaaacctctgcaccagcgacctgctgtttgagccaggtgtgacgttggccgaggcccgc
ctcggtgacctgtgctgccgcggggtcgctcccatgcctcgggaattggccttccctgtg
cccaaggggaagaagtggcacgacctctatgactacatcaggttcccgtgtcagggggct
aagctgctgcacaactccatccagaagaacttcccaagtcctgtggcaggtgaccaagtc
ccggaggagcctggctgcccgctggcgacactctccagagcagtctgtgaccgcctgtcc
cttgtccagcagataaccagtcccaaaggtgtgccacatcggtgtcctgtaatcaccaaa
aacatccctgaggttcacctggcagtcccaggccctccgagagctgtgcctgctggagac
cccgtgctggaggaggagcagaggctgcacggtgccggggacacgaggcagccactgcca
ccccacgatggtggcatccatgtctacgcttaccagagagggggacagacaacccgggct
gtccccggctcagaggaggggcttgtaccggatcccatcctgaagctgagagcaattatt
ggctttggaggctgcagcaccaaatgggctctgtggacacgggacagcacggctgtggtg
tacccctgccacgccgtcatcgtcgccctgctcctcaagactggcgagcagaggttcttc
cttggccacacggaaaaggtgtcggtgctggcgttgagcggcagcagctccttgctggcc
tcggcacaggccgggccccgcagcgtggggcgcctctgggacttccccacgggaacctgc
ctgtgcctcttcaaaacctccctgcagtccctcgtgtccctcagcttttcgcacagtgga
gctgttctgtgtggtgtcggggaggatgtgcacagcaaaacgatggtggtggtgtggagc
actgctcaggtgacccatggtggaggtgtgactgtgctggccaaagcgcacacagatgtg
gacatccgggccatgaagattgctttctttgatgacaccaggatggtgtcgtgtggccgg
gacaacatcaggctgtggcgagtgcggagcggagccctgcgctcgtgtcccgtcgccctg
ggcgagtaccactccctggacttcaccgacctggccttccaggagcggcccgagcaggag
ccggaggaccacgtgctctttgtgtgcagcagaagtggccacgtgctggaggtggactac
gagaacgtctgtgtacggagcgcacggcgcctgctgcctgcacagccccagggggacggg
caggagcaggcagggagcagttcaggccctgggattgctataaacagtatcagcatgtcc
tcgaccttctgtgccacgggatcagaggatggctacatcaggctgtggccactggacttc
tcagctgctatcttagaggcagagcacgagtcttcagtgagttctgtctgcatcagccca
gacagccacaaagtcctgtccacgacagccacggggaatctgggctacctggatgtccag
gcccgggactacaacacgctgatgcgctctcacaaaggatctgtgctgggcttctcggtg
gaggggaagtgggagcagattgcaacagtgtcccaggacaacaccatccgagtgtgggac
ctggcctccaggcagcagctgtatgacttttcagctgcagaggaaacgccgtgtaccgtg
gccttccaccccttgtggaagatgctggcctgtggcttcgacagcggggtggtgcgagtc
ttcagcctggctgcctctgacctcctgctggagcacaagcagcaccgcactgcgatcacc
gggctgaccttctctccagatggcaatttgatgttcagctcctgcttgcagggaactctg
gctctgtacagatttgtggcacagaaaacacaggttctgagagtcctgggcaatgtggtg
gcccgggatgctggcagtggcgtggacactctggtgctcagtggggacagtcgcctgctg
gccttcgtggggccctccaagtatgtcgtgacagtgatggaggcctgctcgctggatgag
ctgctgagggtggacatcagcatcctggacctgcagagcaccgtcttggactctgcagtg
agggtctgctttggtcctgtgcctcagggcgagctcctggtatccactgcttccagtaaa
atcctcgtgcttgatgcaaaaaccggacggctggtgcgagaggtttcccctgtgcacaag
ctgacctgttcttccttggcactgagcaaggatggccagtacctgctcactgctggtgac
aaggtcatcaaagtgtgggactaccggatgcgcttccacatcaacttccaggtgttcatc
ggccactcggagcccgtgcaccaggtcgccttcacccccgaccaagagcacgtcatcagc
gttggggatgccatcttcctctgggatttcctagctccacctccagtcaggtcatcccca
gccagggctcattcctctgtgtccactctgcccctgaggtcagacagcagctctgagaaa
cccaaggatgtctctgagacccctcggcagacagtgcctcttccattgctgtcctcccca
ccgtgtttggatatcagctctgtccacccagcaggatttcaaagtattttctctgagtcg
gacagggaggaggaagcagatctgccagacagcagcaggaaggtggcaaatgggcacaaa
gattcctcagtccttgtggtggaatcagacgggaatgaggagcctgttgtgaggtccaaa
gtgaggcaggagagctcgagatctcctggaaaaccaggaaacgaacccaggaagggaagc
agaactcccaagtcacaatgttccgtccgcccggattcctaccggcatttcactgctcgc
ttcaaggcatcagtgctcccccagagtttcttgtctgctccagcgggcagtgaggtgctg
aagctgaaagcggtgatcggctacaatgggaacggcagaggaaatatggtgtggaacccg
gatacaggcttcttcgcctactcctgtggctgtgtcattgtggttgaagatctgcactcg
gggtcccagaagcaccagctgggccacgctgaggagatctccacactcgccctcagccac
catgcccaggttcttgcctctgcctcagggaagaaggatggagactcccactgtcagatc
tgcatctggagcacccaggatggggcctgcacagcagagctgttccaccatgagacacaa
gtgcaagccatggcattctcctgcgatgacaagttccttgtcaccataggggactacagt
gaccagaccatggctctgtggagcacccacacctatgagctcctgctgtccactcgtatc
tcggagcctctccacgacgtggcttttagccctggctctcaccaagacctggcctgtgtg
gggaggggagctgtgatgttctggctgttggagcagcagggagctgctgtcagtctgaag
gttcatcgagcccctgccccggacgtgctggggctggtggagctgacatctctctgttac
ggtgctgacactctcctttacagtgggaccaactcaggccagatctgtgtgtgggacaca
gagaccaaatcctgcttcatgacatgggaggctgatgagggcgagatcggtgtgctggtg
tgtcggcacaaccggctggtgagcggcagcaacacgaagcgcatccgcctgtggtccgtg
gccaccgtgcaggagctgaggctgaaagggcccgatgccaggtctggctccgtcctgctg
gagcacgagatcaccctggatgggacaattgtgagcgcagcctttgacgactccctggaa
atgggaattgtgggcaccacggcagggaccctgtggtacatcaactgggtggagagcacc
agcatccgcctcatcagcggccacaagaacaaggtgacggaggtgtgcttcagtcccgac
gagagtcactgtgccacgtgcggggaggacggcagcgtgagggtttgggctctgggcagc
accgagctggtggtgcagttccaggtgctcaaccagagctgccagtgcctggcctggaag
cctcgtcccgctggggtgtggccttgtcccggcgagagccagcacgtggtggcagggtac
agcgatggcactgtccgtgtgttcagtgtttccaggacagagatggagctgaaaatgcac
ccccacactgctgcactgacagcaatcacctactccactgatggggaaatgatcttatca
gggggcaaggatgggacagtggctgtcagcagccctcgcactggaatgaccatccatgtc
ctggctgagcacaagggctcccccatcaccgttctgcagtgcaccaggaagcagtaccac
gactttggggtgcaaggaggggagctctggctggccaccagctccgatcgccgggtcagc
gtctgggcttctgactggctgcaggacaagtgtgagctcctcgactggctcagcttccca
gcccctgctggccccgagggtctcgacagcctcccgcccagcctggctgcgttctgccct
tgggaacatggtgtcctggtctacgtgggctttgggctgcagaaggaagctttgttctac
agcctgaggaagaaacaggtgctcaggaagatctccctgccagcctttgccacgtccctc
agcctgtccccagctgcacctttcatggccatcggcttcgatgaccggctgctgcggctg
cagccctgccccgccggggccccgcaggactacgccggccatgacgacaccgtgcacttc
tgccgcttcgcgccctccggccgccgcctcctctcggcctcccacagcgccgtcctcgtg
tgggagctcacaggcgcctga
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