Hirundo rustica (Barn swallow): 120759599
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Entry
120759599 CDS
T09369
Symbol
TBL3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120759599 (TBL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrt03009
]
120759599 (TBL3)
Ribosome biogenesis [BR:
hrt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120759599 (TBL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Utp13
WD40_Gbeta
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR41
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
120759599
NCBI-ProteinID:
XP_039934966
LinkDB
All DBs
Position
15:15133451..15142001
Genome browser
AA seq
809 aa
AA seq
DB search
MADTDPAAAAVRFKSNYAVTRKIEPFYKGGRIQISQDGKFMFCPCGSKVNVIDVESGALL
HSLQQDEEEDVTAFVLSPDDEVLVTGSRALLLRRWHWREPRCERTWRAVHTAPVATMAFD
PTATLLATGGCDSTIKVWDMIKHYCTHNLKGSSGVVHLVEFHPDISRLQLLSSSIDYKIR
IWDLRSSKCVAVLDGHFSAVTSLAFADGNTLLSSGRDKICMVWDLETRQSKRTVPVYETV
EAAVLLPEEGDFSQLGVKKRGLHFVTAGSKGILRVWDVATAACVHTQPVPFTLQEEPSER
SLSQCQFVPARNEILTVSVEHNIVFYDAETLQLRKQLAGYNEEVLDVKFLGPGDSHVVVA
TNSPQLKVFELATSHCQILYGHTETILALDVFRKGLMFVTSAKDRSIRVWRMGRAGRVTC
VAQGLGHAHGVGAVACSRLKESFVVTSSQDCTIKIWNIPESLTSKAKAALISSPEPLHAR
VTERGHNKDINSVAVSPNDKLLATGSQDRLAKLWSCSDCSLLGVFSGHKRGIWCVQFSPV
DQVLATSSADGTLKLWGLRDFSCLKTFEGHDASVLKLVFVSRGAQLLSSGSDGLLKLWTI
KTNECVKTLDGHEDKIWGLHSNKKDDMVVTASSDSCITLWQDVTEIEEKEAQAKQEEQIM
KEQELSNLLHEKRYLKALGLAISLDRPHTVLTVVKAILKEPEGRRHLEENIVRLRKDQKE
AVLSFLVTWNTNSRNCHEAQAVMETLLKHEAPDNLLQFSGIKSAVESLLPYTERHFQRLS
RLLQASTFIEFMWHNMRLAEVAQQDQGTL
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacggacccggctgccgccgccgtgcgcttcaagagcaactacgccgtgacg
cggaagatcgagccgttctacaaaggagggcgaatccagataagccaggatgggaaattc
atgttctgcccctgtgggagcaaagtcaacgtcatcgatgtggaatcgggagctctcctg
cacagcctccagcaggatgaggaagaggatgtcacagcattcgtgctcagccctgatgat
gaggtgctggtgacagggagccgggcgctgctgctgcgccggtggcactggagggagccc
aggtgtgagcgcacctggcgagccgtgcacaccgcgcccgtggccaccatggccttcgac
cccacggccaccctgctggccacaggtggctgtgacagcaccataaaggtctgggatatg
atcaaacactactgcacacacaacctgaaaggatcctctggagtggtacacctggtcgag
ttccaccccgacatctcccgcctgcagctcctctcctcctccatcgattacaagatccgc
atctgggacctgaggtccagcaagtgcgtggcagtgctggacgggcacttcagtgctgtc
acctcgctggcctttgcagacgggaacaccctcctgagctcgggccgtgacaagatctgc
atggtctgggacctggagaccaggcagagcaaaagaactgtccctgtctacgagaccgtg
gaagccgctgtgttgttgcctgaagagggagatttctctcagctgggtgtgaagaaacga
gggctgcactttgtcacagctggcagcaaaggcatcctgagggtgtgggacgtggccaca
gctgcctgtgtgcacacccagcccgtgcccttcacgctgcaggaggagcccagcgagcgc
agcctctcccagtgccagtttgttcctgccaggaatgagatcctcaccgtgtctgtggag
cacaacattgtcttctatgatgctgaaaccctccagctcaggaagcagctcgcagggtac
aacgaggaggttctggatgtgaagttcctgggccctggtgactctcacgttgttgtggcc
accaacagcccccagctgaaagtgtttgagctggcaacgtcccactgccagatcctgtat
ggccacacagaaacaatcctggctttggatgtcttcaggaagggcctgatgttcgtcacc
agcgccaaggacagaagcatccgtgtgtggcggatgggcagggctggcagggtgacctgt
gtggcccagggcctgggccacgcgcacggcgtgggcgctgtcgcctgctccaggctgaag
gaaagctttgtagtgaccagcagccaggactgcaccatcaagatctggaacatcccggaa
tccctcacttccaaagcaaaagcagccttgatctccagcccagagcccctccatgccagg
gtgactgagaggggccacaacaaggacatcaacagcgtggcagtgtcccccaacgacaaa
ctgctggccacgggctcgcaggaccggctggccaagctctggtcctgctccgactgctcc
ctcctgggggtcttctctgggcacaaacgtggcatctggtgcgtgcagttctcccctgtg
gatcaggtcttggccacgtcctcggctgatggcaccctgaagctttggggacttcgggac
ttcagctgtctgaagacctttgaaggccacgatgcctcagtgctgaagctcgtcttcgtg
agccgaggggctcagctgctcagcagtggatctgatggtctcctaaaactctggacaatt
aaaacaaatgagtgtgtgaagacactggatggtcatgaagataaaatctggggccttcac
tccaacaagaaggatgacatggtcgtgacagcctccagtgactcctgcatcaccctgtgg
caggatgtgactgaaattgaggagaaagaagcacaggctaaacaggaggagcagattatg
aaagagcaggagctttctaaccttctccatgagaagaggtacctcaaagctctgggcctg
gccatttccctggaccggccacacacggtgttgacagtggtcaaggccatcctcaaggag
cccgaggggaggaggcacctggaagagaacattgttcggctccgcaaggatcagaaagag
gctgtgctgtccttcctggtgacgtggaacaccaactcccgaaactgccacgaggcgcag
gctgtcatggaaacgctgctgaagcacgaggcccccgacaacctcctgcagttctcggga
attaaatccgctgtggagtccctgctgccctacacagagcgccacttccagaggctgagc
cggctgctccaggcttccaccttcatcgagttcatgtggcacaacatgaggctggcagag
gtggcccagcaggaccaggggactctgtga
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