Hirundo rustica (Barn swallow): 120759607
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Entry
120759607 CDS
T09369
Symbol
SOX8
Name
(RefSeq) transcription factor SOX-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120759607 (SOX8)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120759607 (SOX8)
SSDB
Ortholog
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GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120759607
NCBI-ProteinID:
XP_039934978
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All DBs
Position
15:complement(14702226..14707524)
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AA seq
472 aa
AA seq
DB search
MLNMTEEHDKALEAPCSPAGTTSSMSHVDSDSDSPLSPAGSEGLGCAPAPAPRPPGAAAL
GAKVDAAEVDERFPACIRDAVSQVLKGYDWSLVPMPVRGNGSLKAKPHVKRPMNAFMVWA
QAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKYQP
RRRKSVKAGQSDSDSGAELSHHAGTQLYKADTGLGGMADSHHHGDHAGQPHGPPTPPTTP
KTDLHHGGKQELKHEGRRLAESGRQNIDFSNVDISELSSEVINNMETFDVHEFDQYLPLN
GHAALPAEHGAASAAAASYAGSYSHSGAAAQVWTHKSPASASPAAAEPGQQQRPHIKTEQ
LSPSHYSEQPHGSPAHSDSYGSYGGQACATTAAPAAASSSSFSSSQCDYTDLQSSNYYNP
YPGYASSLYQYPYFHSSRRPYATPILNGLSIPPAHSPTANWEQPVYTTLTRP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacatgaccgaggagcacgacaaagcgctggaggctccctgcagccccgcgggc
accaccagctccatgtcgcacgtggactcggactcggactcgccgctctcccccgccggc
tccgaggggctgggctgcgcccccgcgcccgccccgcgcccgcccggcgccgccgcgctg
ggggccaaggtggacgcggccgaggtggacgagcgcttccccgcctgcatccgcgacgcc
gtctcgcaggtgctcaagggctacgactggagcctggtgcccatgcccgtccgcggcaac
ggatcgctcaaggccaagccgcacgtcaagcggcccatgaacgccttcatggtgtgggcg
caggccgcccgcaggaagctggcggaccagtacccgcatctgcacaacgccgagctcagc
aagacgctgggcaagctctggcgcttgttgagcgaaaacgagaaacgtcccttcgtggag
gaagccgagcggctcagggtgcagcacaaaaaggatcacccggattacaaataccagccc
cggaggaggaaaagcgtcaaagccgggcagagcgactcggactcgggggctgagctcagc
caccacgccggcactcagctctacaaggccgacacggggctggggggcatggccgactcc
caccaccacggggaccacgcaggccagccccacgggccccccacgccgcccaccacgccc
aaaaccgacctgcaccacggcggcaagcaggagctgaagcacgagggccggcgcctggcg
gagagcggccgccagaacatcgacttcagcaacgtggacatctcggagctgagcagcgag
gtcatcaacaacatggagaccttcgacgtgcacgagttcgaccagtacctgcccctgaac
ggccacgccgcgctgccggccgagcacggcgccgcctctgccgccgccgcctcctacgcc
ggctcctactcgcactcgggcgcggccgcccaggtgtggactcacaagagcccggcctcg
gcgtcgccggcggccgccgagccgggccagcagcagcggccgcacatcaagacggagcag
ctgagccccagccactacagcgagcagccccacggctccccggcgcactccgactcgtac
ggctcctacggcggccaggcctgcgccaccacggccgccccggccgccgcctcctcctcg
tccttctccagctcccagtgcgactacacggacctgcagagctccaactactacaacccc
taccccggctacgcctccagcctctaccagtacccctacttccactcgtcgcgccgcccc
tacgccacgccgatcctcaacgggctgtccatcccgccggcgcacagccccaccgccaac
tgggagcagcccgtctacaccacgctgaccaggccttaa
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