Hirundo rustica (Barn swallow): 120759768
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Entry
120759768 CDS
T09369
Symbol
RAI1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120759768 (RAI1)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120759768 (RAI1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
120759768
NCBI-ProteinID:
XP_039935304
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All DBs
Position
15:13987124..14060262
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AA seq
1921 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYTVQENSPYPARYSGDESLQAWGGQPQALPG
GVAKYEDNLMKKTVALAGGRPYHEPAATSLPFRTHFQQQPQQQPQQQQQQQQQQPPALPY
PKLQRQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQP
PLERPLGSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPPQPPQPPQPPQPP
QPMQGRHHASETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARS
VGRSPSYSSTPSPLMPNLENFQYSQQPLSAGAFPAGIADHSHFMPLLNPSPTDGTSPDTQ
SGNCKNLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKTAVPQKKGIKTPAR
TPEQLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLYC
NQNRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHATLPLETFTKYVSNERD
CPRLLLSALSQEELASEIIVLQDAISEKADKAWANLPMLGKETTKSPFQLENHRPSLDSM
VKGAWPSQGDSSTLTEPLKMDKASGASTGKDFSEEVYEGPQVEFTATESKDVLKDTAPLA
FNSKPSIPAATSSAGATGYSCYSNTTANSVASDNAMEHFEWPEESLGEACLRWKDLQATD
LPKGLFPSKLVSSCKEKKNACGLDLCDGEQPAKSEPVQDFAQQVMAEEEETLTYDEATKA
DSERWLQDTRHCCSAGDFSEIPIISSPDLKESDLEAEEYSSLCELAGSEQKSVTYDASPS
KPPEMPAVLSSSEVPVSAEETVSTVEKESSALTPRLSGQSVILLGPAVGTETKVKSWFKS
SLPHIQPEEENGGGETSHLEATDAESTSSVMVKQQLTPENVLGKMEPISRGKSLRNKRVH
CRLPEGDGPSSAVLSPFDQLPAASSVAGACLGPDGQTEVPSKSTQSQTPRFPAEGLPARM
CTRSFTALAEPRAPAPLEGTEGPAHQEKLGKKPAAGVKQRVAFKTRKRNGQPAPRVVQNA
GDAALLVPGLVAAEEVAGPTPLEGDAVEAGERDQRSMILRSRTKTQEVFYTKRQRGKRAA
DVRLKNCKAPKKLLSNNHLPPAFKLPAPGSPHKEGKVGARMKLPKAGPGMGGKMSERPLH
SLKRKSTFISPIPSKKRNLVLRSNSGGVKEEKPEGPPSLFKKMPVAKKVKAKLPPKSSGE
AILKPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFTC
KPAATAVAATTAYGSSLSPAGAEQGERVVKHSGVAVAVGDARLPKLAAAQKVPTVPVAEP
LCRNPNGRTPKGKPGGGKKLPYDGCQGEACGSTPGTQSSPNMVAKNLGLLPKKRNRKGKS
SSAGMTKAPLSPALPPPLPRERVAGYERCGEAPREKKPKTEEKEAGSGDGPPEGRSAAGR
RGAKPRANHSNYNGYSKRQRKRLGHGKAKAVPARCKSRGKRRRQPQQAPLLHPAEPEIRL
KYISCKRLRADSRAPPFAPYVRVERRGEFTTTCTVVNSPGDEARLQRGTAGPAPRPRAAL
PASSTMHMGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKAR
AEGPGEDSAVPAAAERAPRGTEGGCGGKAARPEGAAEAAKQSSLRSSPRGMFRRLQSCYC
CDERTEGEEAAEKPRRHECHKAESPPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQ
EAVKAAADLKCSSCQQAGATVGCCQKGCPHTYHYACAIDTGCLLTEESFSLRCPKHKRQP
V
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcagctgccttacgcgggc
tatgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcagggcagcag
ctgcagggcaggccggccttttccaattacaccgtgcaggagaacagcccttatccggcc
cggtattccggggacgagagcctgcaggcgtggggtggccagccacaggcgctgcccggc
ggcgtggccaagtatgaggacaacctgatgaagaagacggtggcgttggcgggtgggcgg
ccataccatgagccggcggccacctcgctgcccttccggactcacttccagcagcagccg
cagcagcagccgcagcagcagcagcagcagcagcagcaacagccacccgcgctcccctac
cccaagctgcagcggcagaaactgcccaacgatgtctcctcacccatgcccttctcacag
agccctcacttcgggcagcactcccagtccttccctgcctcctccacctactcctcagtc
cctgggggcagccagcctgcccactcctacaagagctgcacggcgccctcggggcagccg
ccgctggagcggcctctgggcagtgccgccagcctggcccctggcccccgcgtgcccaac
ctgcacggctaccagcccaaccgcatcggctacgagcagcccccgcagccgccgccgcag
cccccgcagccgccgccgccgccgcagcccccgcagccaccgcagcccccgcagcccccg
cagcccatgcaggggcggcatcacgcctcagaaaccctccactaccaaaacctggccaag
taccaacattacaaccagccaggccagacctactgccagggcgacgcgccgcccgtccgg
acgccagagcaatactaccagacgttcagccccagcgccagccactcgccggctcgctcc
gtgggcaggtccccgtcctacagctccactccctcccctctgatgcccaacctggagaac
ttccaatacagccagcagccgctgagtgccggtgccttcccggccggcattgctgaccac
agccatttcatgccgctgctgaacccttctcccaccgacgggacgagccccgacactcaa
tccgggaactgcaaaaacttgcagaaggagaagctgcccgaaaacctgctgtcagacctg
agcctgcagagcctgacggcgctcacctcccaagtggagaacatctccaacaccgtccag
cagctgctgctctccaaaacggctgtgccccagaaaaaaggcatcaagaccccagcgagg
acccccgagcagctcaaggggcagcactgcagtcctgagagcagcacctactcggcagag
caggtggggacccccctgtccgacccgctgagcaccccccagtccgtccacgccgagaca
caggacgctgactatctcagtgggtcagaggaccagctggagaggagtttcctgtactgc
aaccagaaccgcagccctgcccgcgtcaacagcaactccaaggcaaagcctgagtcagtg
tccacctgctctgtgacctccccagatgacatgtccaccaaatcagatgactccttccag
agtatccatgccaccctgcccctggagaccttcaccaagtatgtgagcaatgaacgggac
tgcccccgactgctcctcagtgccctgtcccaggaggagctggcttctgagatcatcgtc
ctgcaggatgccatcagcgagaaggcagacaaagcctgggccaacttgcccatgctgggc
aaggagaccaccaagtccccgttccagctggagaaccaccggcccagcctggactccatg
gtgaagggcgcctggcccagccagggtgactccagcacgctcaccgagccccttaagatg
gacaaagcttcaggggccagcacggggaaggacttcagcgaggaggtgtacgagggtccc
caggtggagttcacagccaccgaaagcaaggatgtgctgaaggacactgccccactggcc
ttcaactccaagcccagcatcccggcagcaacatcaagtgcgggagccaccggctacagc
tgctactcaaacaccaccgccaactcggtggcgtctgacaatgccatggagcatttcgag
tggccggaggagagcctgggtgaggcctgcctgcggtggaaggatctccaagccacagac
ctccccaagggcttgttccccagcaaattggtgagctcctgcaaggagaaaaaaaacgcc
tgcggcttggacctgtgcgatggagagcagccagccaagagcgagccggtccaggacttt
gcccagcaggtgatggcggaggaggaggagacactgacctacgatgaagcaacaaaggcg
gacagcgagaggtggctgcaggacacccggcactgctgctcagctggggacttcagtgag
atccccatcatctcctcgccggacctgaaggagtcagacctggaggcagaggagtactcc
tcactctgtgagctggctggctcggagcagaagtcggtgacgtacgatgcctcaccatcc
aagcccccggagatgccggccgtgctgtcctccagcgaggtgcctgtgtctgccgaggag
actgtcagcacagtggagaaggagagctcggctctcaccccacgcctctctggccagtct
gtcatcctgctgggccctgctgtgggcacggagaccaaggtgaagagctggttcaagtcc
tccctgccccacatccagcctgaggaggagaatggtggaggagagacgtcccacctggag
gcaaccgatgctgaatccacctcatcggtcatggtgaagcagcaactcacgcccgaaaat
gtgctggggaagatggagcctatctcacggggcaagagcctccgcaacaagagggtccac
tgccggctgccggagggggacggccccagcagcgccgtgctgagtccattcgatcagctg
ccggctgccagcagcgtggccggcgcctgcctggggccagacggacagacggaggtacct
agcaagagcacccagagccaaacaccccggtttccagcagagggtctgcctgcacgcatg
tgcacccgctccttcaccgccctggccgagccccgcgcccctgccccgctggaggggact
gaaggccccgcgcaccaggagaagctggggaagaagcccgctgctggcgtgaagcagcgg
gtggctttcaaaaccaggaagcgcaacggccagccggcccccagggtggtccaaaacgcc
ggtgatgccgccctcctggtgcccggcttggtggcggcggaggaggtggcggggccgaca
ccgctggagggggacgcggtggaagccggggagagggaccagcggtcgatgatcctgcgc
tcccggacgaagacacaggaggttttctacaccaagaggcagaggggcaagcgggcagct
gacgtccggctgaagaactgcaaggcgcccaaaaagctcctatccaacaaccacctcccg
cctgccttcaagctgccagctccgggcagcccccacaaggagggcaaggtgggtgcccgg
atgaagctgcccaaagcggggccgggcatggggggcaagatgtcggagcggccgctgcac
tcactaaagaggaagtccaccttcatctcccccatccccagcaagaagaggaacctggtc
ctgcggagcaacagcggtggcgtgaaggaggagaagccagagggtccccccagcctcttc
aagaagatgccggtggccaagaaggtgaaagccaagctgccccccaagagctctggcgaa
gccatcctgaagccccccctgccaaaggaggcccctgatgtctgcatcaagatcacctcc
cgggcggccttccaggaggccaccaagaccaaagtgctgcctccccgcaagggccgcggc
ctcaagctggaggccatcgtccagaagatcacctcacccaacctgaagaagttcacctgc
aaaccggcggccacagcagtggcagccacgactgcctatggctcctccctgagcccggct
ggggcagagcagggagagcgggtggtgaagcacagtggggtggccgtggcagtgggcgac
gcgcggctgcccaagctggcggcagcacagaaggtgcccacggtgccggtggctgagccg
ctctgccggaaccccaatggccgaacaccaaaggggaagccgggtggtgggaagaagctg
ccctacgacggctgccagggggaggcttgtggctcaacgccggggactcagtccagcccc
aacatggtggccaagaacctggggctcctgcccaagaagaggaatcgtaagggcaaaagc
agcagcgctgggatgaccaaggcgcccctgagccccgcactgcctccaccactgccccgg
gagcgtgtagccggctacgagcggtgcggagaggcgcctcgggagaagaaaccaaagact
gaggagaaggaggcagggagcggcgatggccctcctgagggacgctccgccgcgggccgg
cgcggggccaagccgcgggccaaccactccaactacaacggctactccaagcggcagcgg
aagcgtctgggccacggcaaggccaaggcggtgccggcgcggtgcaagagccgcgggaag
cggcggcggcagccccagcaggccccgctgctgcaccccgccgagcccgagatccggctg
aagtacatctcctgcaagcggctgcgggcggacagccgcgccccgcccttcgctccctac
gtccgcgtggagcggcgcggagagttcaccaccacctgcaccgtggtcaactcgcccggc
gacgaggcgcggctgcagcggggaacggccgggccggcgccgcggccgcgggcggccctg
cccgcctcctccaccatgcacatggggccggtggtgtcgaaggcgctgagcgccgcgtgc
ctggtctgctgcctctgccgcaaccccgccaactacaaggacctgggggacctctgcggg
ccctactaccccgaggactgcctgcccaagaagaaatcccggctgaaggagaaggcgcgg
gcggaagggccgggcgaggactccgccgtgcccgccgcggccgagcgggcgccccgcggg
actgagggcggctgcggcgggaaggcggcgcggcccgagggggccgccgaggcggccaag
cagagctcgctgcgctccagcccgcggggaatgttccgtcggctgcagagctgctactgc
tgtgacgagaggacagagggcgaggaggcggccgaaaagccccggcggcacgaatgtcac
aaggccgagtccccgccgcaggagccggcgggcgacacgcaggagcactggctgcacgag
gcctgtgccgtatggaccgctggggttttcctggtggcggggaagctctatgggctgcag
gaggctgtcaaggcggctgccgacctgaagtgctcgagctgccagcaagcgggagccacc
gtgggctgctgccagaaggggtgtccccacacctaccactacgcgtgtgccatcgacaca
ggctgcttattaactgaagagagcttctctctgagatgtcccaaacataagaggcagccg
gtgtag
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