Hirundo rustica (Barn swallow): 120759821
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Entry
120759821 CDS
T09369
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120759821 (TNRC6A)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120759821 (TNRC6A)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120759821 (TNRC6A)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120759821 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ago_hook
Motif
Other DBs
NCBI-GeneID:
120759821
NCBI-ProteinID:
XP_058278620
LinkDB
All DBs
Position
15:15840556..15935446
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AA seq
1421 aa
AA seq
DB search
MSELLLRVGEELPLSKCQDEASHPPVPADWEQELEAKATKEVERKLSRAFLPHLCGTERR
DLVQEEEEQLMEERKKRKEDKKKKEAAQKKAIEQKIKVPEQTKTSVSQPQPVTSNGTSTG
TSTTNNAKRAPASSQQQPLPRYPPREVPPRFRHQEQKQLLKRGQQLPGIAANLGSAPKAL
NGQSGGSTGTNNQPVTNGEVPNSSKKQPGMPPIRDLVSHSPNQSDLNHSGLGSHYENSHW
GPVSSNSDSSTNWDKVIVDGSDKEAWPSITGSDPELTSECMDTDSASSSGSERNLVIMAS
GSTGGEGDGIRNGIGHGSQNKFVVGSNSNNVGNGSINGPWGLSHGSIISTCQVSVDAPDS
KSESSNNRMNAWGTINSSSNGGLNPSTLNSNGNHGAWSVLENSGHALKGSVGSGSPGTSI
QCSTIGQMANSQSINSKVGASAHGSWGSLQESCDSEVNGTRNVSFSGQPQNLNTEMNGPN
NTTNFMTSSLPNSAGSVQMSELPNSAGPGAWRVSTMNHSQIQASPVANGTSISHLSNGEA
KTGGSYGTTWGAYGSSYSGDKCPGPNSQANGDTVNATLMQPGGSGPGSTNFQINGNKGGG
VWEAGAVSSQNMPWGNGSGAGAGGSRRGWGSPAQNTGTNISNGEWSKLPGNQHSNEGVNG
NSRKFTNGWKSAEEEDLGSQSSAASQLAEQNSTWAKTGTGDSEGSSESAGCHEDRAAAEG
QNRERRKVDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGT
EAWGGSVTQTSSSGGCVDRPSPNNNDTSSVSGWGDPKSATRWGDSKGSNSQGGWEEDSAA
TVMVKSNQSWGSGKEEKSSWNDTPKMKQGWGDGQKAGQGWAVSAGDSWGENSRSNHWGEA
KKSSSGGSSGDRSVSGWNEPGKSNSVTWGGNNTTPNNSSGWDEPAKPNQSQGWGDPPKPN
QPQVWGDSSKPVTSPEWNKQDVGSWGAPSATNKPPGSGWLGGPMPAPAKEEEPTGWEEPS
PESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNSSSSSDQQAQVHPQLLSSSAMSS
KESSSGSGWGEPSAPATTVDNGTSAWGKPMDTGTSWGEPGSDAGGTSGWGNASLGQQPPN
KPGPKSMQDSWCGDDVPLSGSRQTSWEEEEDVEIGMWNSSSSQEANPSLNWPPYMKKMPT
KGIMKGGNKQDETWINPFIKQFTNLSFSRESPEETIQSNKMDMSGGLLQDKRMEMDKHGL
GVGDYSRVVGKGPGSRPQIPKESSMDRGPYFDKDGIVADESQNMQFMSNQNMKLPPSNNA
LPNQALGSLAGLGMQSLNSVRQNGNPSVFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQV
PPPLLSPQDGQGVLLDLRMFRVPGSNTPPCLCRWASADGPA
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagctgctcttgagggtcggagaagagctgccactctccaagtgccaggacgag
gcgtcccaccctccggtgccggcagactgggaacaagaattggaagctaaagctaccaaa
gaagtcgaaagaaaactaagcagggctttcctgcctcatttatgtggaactgagagaagg
gatttagtgcaagaagaggaagaacagttgatggaagaaaggaaaaagagaaaagaagac
aagaagaagaaggaagctgctcaaaaaaaggccattgaacaaaaaatcaaagtgccagaa
caaaccaagacaagcgtaagccagccccagcccgtcacctccaacggcacttccacagga
accagcactactaataatgccaagcgggccccagccagcagccagcagcagcccttgcct
cgataccctcctcgggaagtaccaccgcgattccgacaccaggaacagaagcagcttctg
aaacgagggcagcagttacctgggatagctgcaaacctgggatccgctcccaaagcgtta
aacggccagtcaggaggcagcactggcaccaacaaccagcccgtgaccaacggagaagtg
cccaacagcagcaaaaaacagccaggcatgcctcccattcgggacttggtgagccactcc
cctaaccagtcagatctgaaccacagtggtctaggatcccattatgaaaattctcactgg
ggaccagtctcttcaaatagtgactccagcacaaactgggataaagttatcgtagacggc
tctgacaaagaagcatggccatcaatcactggcagtgacccagagctgacttcagaatgt
atggacactgactctgcctccagctctgggtcggagcggaacctcgttatcatggcttca
gggagcacgggcggagaaggcgatggcattcgcaatggcatcggacatgggtctcagaat
aagtttgtggttggtagcaacagcaataatgtgggcaatggaagtattaatgggccgtgg
gggttatcccatgggtccataataagcacatgtcaagtttctgtggatgctcctgacagc
aaatctgaaagtagcaacaatagaatgaatgcttggggcaccataaactcttcatcaaat
ggagggttaaatccaagcactttgaattcaaatggcaaccatggtgcctggtccgtgttg
gagaacagtggacatgccctgaaagggtccgtggggagtgggagtcctggcacaagcatt
cagtgcagtaccataggtcagatggccaacagccagagtattaactcgaaagtgggtgcc
tcggcccacggttcctggggaagccttcaggaaagttgtgattctgaagtaaatggtaca
aggaatgtttcattcagtgggcaacctcaaaaccttaacactgaaatgaatggaccaaat
aacactactaactttatgacctctagtttaccaaactctgctggttcggtgcagatgagc
gagctgcccaactctgcagggcccggggcctggcgcgtgagcacaatgaatcattctcag
attcaggcctctccagtggcaaacggcacttccatctctcacctgagcaacggggaggcc
aaaaccggcggctcttacggtactacctggggtgcctatggttctagttactctggagac
aaatgtccaggcccgaacagccaagctaatggtgacactgtgaatgcaactctaatgcag
ccgggcggcagcgggcctggcagcactaactttcaaatcaacgggaataaaggcggaggg
gtgtgggaggcaggggcagtcagctcccagaacatgccgtgggggaacgggagcggtgcc
ggtgccggcgggagcagaagaggatggggcagccccgcacagaacaccggcaccaacatt
tccaacggggaatggagcaaactgcccggcaatcagcattccaatgaaggagtgaacgga
aacagcaggaagtttacaaatggatggaagtctgctgaggaggaggatctcggcagccag
agctctgctgcctcccagctggccgagcagaacagcacgtgggccaaaacaggtacaggg
gacagcgaggggagctccgagagcgccgggtgccacgaggacagagccgctgcggagggc
cagaaccgagagaggaggaaagttgaccagcacacgttactccaaagcatagtgaacaga
actgacttagatccgcgtgtcctttccaactctggttggggacagactccaatcaaacag
aacactgcctgggataccgaaacgtcgccgaggggtgaaagaaaaactgacaatgggaca
gaggcctgggggggctctgtgacacagacttccagctcaggggggtgtgtggatagacct
agccctaataataacgatacctcatctgtatcggggtggggagatccaaagtctgctaca
aggtggggagactccaaagggtcaaacagccaaggggggtgggaagaagattctgctgct
acagtaatggtcaagagcaatcaatcgtggggaagtggcaaagaggagaagtcatcctgg
aatgacacaccgaagatgaagcagggatggggagatggacagaaggccggccagggttgg
gcagtgtctgctggtgacagctggggtgaaaactctagaagtaaccactggggtgaggca
aagaaatccagttccggaggcagcagcggcgacaggtcggtgtctggttggaatgagccg
ggtaaatcaaattctgttacttggggaggcaataacacaaccccaaacaactcttcagga
tgggatgagcctgcgaagcctaatcagagccagggctggggagaccctccgaaacccaat
cagcctcaagtctggggggactcctcaaagccagtcacctctcctgagtggaacaaacaa
gatgttggctcgtggggagccccgtctgccacgaacaaacccccggggtccggctggctg
ggggggccaatgccagccccggcaaaggaggaagagcccacgggctgggaggagccgtcc
cccgaatccatacgccggaagatggagattgatgatggaacttctgcttggggtgatccg
agcaagtacaactacaaaaatgtgaatatgtggaataaaaatgtccctaacagtagcagc
agttcagaccagcaagcacaggtacatccgcagctactgtcttcaagtgccatgtctagc
aaggagagcagctcgggttctggttggggagagccttctgctccagccactactgtagat
aacgggacttcggcgtggggtaagcccatggacactggtacgagctggggagagcctggc
agcgatgcaggaggcacctctggctggggaaacgcttctcttgggcagcagcctccaaat
aaacctgggcctaaatctatgcaagatagttggtgtggagatgatgtgccattgagtggc
agtcgtcagaccagctgggaggaagaggaggatgtcgagattggaatgtggaacagcagt
tcctcacaagaagctaacccatcattaaactggccaccctacatgaaaaaaatgcccaca
aagggaataatgaaaggtggaaataagcaagatgaaacatggatcaatccattcattaag
caattcacaaatctcagtttttcaagagaatcgccagaagaaaccatacagagcaataag
atggacatgtctggagggttactgcaggacaagcggatggagatggacaagcacggcctg
ggcgtgggagattacagccgtgtggttggaaagggccctggttctcgtccccaaattccc
aaagagtcttccatggatcgcggtccttacttcgataaggatggcattgtagcagacgag
tcccaaaacatgcagtttatgtccaatcaaaacatgaagcttcccccttcaaataatgca
ctacctaaccaagccctgggctccctagcagggctgggtatgcaaagcttgaattctgtc
agacagaatggcaatcccagtgtgtttggtgttgggaatatagcagcacagcccaggagc
atgcagcagcctccagcacaacctcttaattcatctcagcctaatccacgtgctcaagtg
cctcctccattactatcccctcaggacgggcagggcgtgctgctggatttgaggatgttc
agggtccctgggagcaacacccctccctgcctgtgccgctgggccagcgctgatggccca
gcctga
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