Hirundo rustica (Barn swallow): 120759865
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Entry
120759865 CDS
T09369
Symbol
TSC2
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04115
p53 signaling pathway
hrt04140
Autophagy - animal
hrt04150
mTOR signaling pathway
hrt04218
Cellular senescence
hrt04910
Insulin signaling pathway
hrt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
120759865 (TSC2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120759865 (TSC2)
09143 Cell growth and death
04115 p53 signaling pathway
120759865 (TSC2)
04218 Cellular senescence
120759865 (TSC2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120759865 (TSC2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120759865 (TSC2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrt01009
]
120759865 (TSC2)
Protein phosphatases and associated proteins [BR:
hrt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120759865 (TSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Cnd1
Motif
Other DBs
NCBI-GeneID:
120759865
NCBI-ProteinID:
XP_039935458
LinkDB
All DBs
Position
15:15263463..15296335
Genome browser
AA seq
1827 aa
AA seq
DB search
MAKPQSKDSGLKEKFRNLLGLGTSRGSSKSSEGKQTEFIITAEILKELSIECGLSNRIRA
ISQICEVAKTKKIEEHAVEAVWKVVADMLQPERPAEARHAVLHLLKSIVQGQGERLGILR
AHFFKVIKDYPSNEDLHERLEVFKALTENGRYITYLEEELADFVLQWMDVGLTSEFLLVL
VNLVKFNSCYLEDYVADMVHKICLLCIQTSSSVDIEISLQVLDAVVCYNCLPSENLPVFI
ITLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYNMCRIMEDRSYMADAALLRGAVFFVG
MALWGAHRLNSLRNSPTSVLPSFLKAMTCPNAVVSYEIVLSITRLIKKYGKELQAVTWDI
LLDIMERLLQQLQVLESQELKSIVHDLLTTVEELCDQNDFHGSEERFFELVERCADQRPE
SSVLNLITYRAQSIHPAKDGWIHNLQLLMERFFRNESRSAVRIKVLDVLSFVLSINRQFY
EEELINLVVISQLAHIPEDKDHQVRKLATQLLVDLAEGCNTHHFNSLLDIIEKVAAHSLS
SPSELEERDLLSYSASLEDVKTAVLGLLIILQTKLYSLPSSHATRVYEMLIQHVQRHYIY
SYSLPVASSIRLQVFDFLLMLRADSLHRLGLSNKDGAVRFSPYCLCDFVEAEKRASEKKP
PGTLSPPSGSPSVPSQGATIRVGHLPYSMVFGVLLQCLKQETDWKVLKLVLNKLPESLRY
KVLFLTSPCNIDQLASALSYMLTDKKTTDRLHGTPEGFSRTDLHLAVVPVLTALISYHNY
LDKAKQREIVYCLEHGLIYRCANQCVVALSVCSVEMPDIIIKALPVLIVKLTHISATANM
AIPLLEFLSTLARLPHLYRNFAAEQYASVFAISLPYTNPSKFNQYIVCLAHHVIAMWFIR
CRLPFRKDFVPYITKGLRSNVLLSFDDTPEKDSFRARSTSLNERPKSSLRLAKNAKQGLN
NSPPVKELKEPSAVDAFRSRSISVSEHVVRSRIQTSITSSSLGSADENSMAQADDNLKNL
HLELTETCLDMMARYVFSNFTAVPKRSPVGEFLLAGGRTKTWLVGNKLVTITTSVGTGTR
SLLGLDSAEFQSAPESSSDPVLQVRQTKEAPAKLESQAGQQVCRSSRNRVRSMSGGHALR
VGALDSSASHFPSGSSSQGTQGPPAPAARPEKGTPAPQTALQKEKANLAAYVPLLTQGWA
EILVRRPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMAAERFKEHRETALYKSLSV
PSSSLATGTAKPSLLQRSNTVASFSSMYQSSCQGKLHRSISWAESAVVLEEGSPGEMELR
EAESPAESPESEDAETSCSEHVLSEERFGKGQDSYSRSSSTSSQEDKSLKSEELAEGGIP
IGREEGRALEELSFQPSQPLSKSSSSPELQTLQEVLKDANGREVPRRLSTEVKSKSQSGN
LEGEGLGGWAGGAEGGGAAGPGAAAGAGASPRSPSGHRPRGYTISDSAPSRRGKRIDRDA
FKGRAAASNAEKVPGINPSFVFLQLYHSPFFGDENNKPLLLPNETFERSVQLLDQIPSYD
THKIAVLYVGEGQSNNEIAILSNEHGSYRYTEFLTGLGKLIELKDCQPDKIYLGGLDVCG
EDGQFTYCWHDDIMQAIFHIATLMPTKDLDKYRCDKKRHLGNDFVSIIYNDSGEDFKLGT
IKGQFNFVHVIITPLDYDCNLVTLQCRKDMEGLVDTSVAKIISDKNLPFVARQMALHANM
ASQVHHSRSNPTDTYPSKWIARLRHIKRLRHRLREETQYQSPGLPLQLHPSAPTKPPPQI
PQDPPPAYETGQRKRLISSVDDFTEFV
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctcagagcaaggattctgggctgaaggagaagttcaggaacctcctgggg
ctgggaacatcccggggaagttcaaagtcgtcggagggcaagcagacagagtttatcatc
acggcagaaatactcaaggaactgagcatagagtgtggattgagtaacaggatacgagca
atcagtcaaatttgtgaagtggcaaaaaccaaaaaaattgaagagcacgccgtggaggcc
gtgtggaaggtggtggctgacatgctgcagccggagcgtcccgccgaggccaggcacgcc
gtgcttcacctgctcaagtccatcgtccagggacagggtgagagattagggatcctcaga
gcccatttctttaaggttattaaggattatccctccaatgaagatttgcatgaacggctt
gaagtgttcaaggctctgacggagaacgggcggtacatcacctacctagaggaggagctg
gctgattttgtgctgcagtggatggatgttgggttgacttctgagttcctcctggttttg
gtgaacctggtgaagttcaatagctgctatctggaagactatgtagctgacatggtccac
aagatctgcctcttgtgcattcagacttcctcatctgtggacatagagatttccttgcaa
gtcctggatgccgttgtctgttacaactgcctgccctcggagaacctgcccgtgttcatc
atcaccctgtgccgcaccatcaacgtgaaggagctctgtgagccctgctggaagctcatg
cgcaacctcttgggaactcacttgggacacagtgccatctacaacatgtgcaggatcatg
gaagacagatcctacatggcagatgcagccctgctgagaggagctgtgttctttgttggg
atggctctgtggggggctcatcgcctcaattccctcaggaactccccaacttcagtgctg
ccttcattcctcaaggccatgacctgtcccaacgcagtcgtgtcctacgagatcgttctc
tccatcacgcgcctgatcaagaaatacgggaaggagctgcaggctgtgacctgggacatc
ctcctggacatcatggagaggctgctgcagcagctgcaggttctggagagccaggaactg
aagtccattgtacatgatctcctaaccacagtagaagaactctgtgaccagaatgatttt
catggctctgaagagagattttttgagctagtggaaagatgtgctgatcagagaccagaa
tcttctgtgttaaacctgataacatacagagctcagtccatccaccctgccaaagacggc
tggatccacaacctgcagctcttaatggagaggttcttcaggaacgagagccgcagtgct
gttaggattaaagttctggatgtgctgtcctttgtgctgagcatcaacaggcagttctat
gaggaagagctgataaacctggtggtgatctcccagctggctcacatcccagaggataag
gaccatcaggtccggaaattggccactcagctgctggtggacctggctgaaggctgcaac
actcatcacttcaacagcctgctggacatcatagagaaggtggctgcacattctctgtca
tctccttcggaactggaagagagggacttgctgtcttactcagcttctctggaggatgtc
aagacagcagttcttgggctcctcataattcttcagaccaagctgtacagtttgccctcc
agccacgccacgcgcgtctacgagatgctgatccagcacgtccagcgccactacatctac
tcctacagcctccctgtggccagcagcatcaggctgcaggtgtttgatttcctgctgatg
ctccgagctgactccctgcaccgcctcggcctttccaacaaggatggagcagtgaggttc
agcccctactgcctctgtgattttgtagaggcagagaaaagggcttctgagaaaaagccc
cctggcaccctgtccccaccttcaggcagccccagcgtgccttcccaaggtgccaccatc
cgggtgggacacctgccctactccatggtctttggggtcctcctgcagtgtttgaagcag
gagacagactggaaggtgctgaagttggttctcaacaaattacccgaatccctccgctat
aaagtgctatttttaacttctccttgcaacatagaccagctggcctctgcactgagctac
atgctcacagacaagaagaccacggacaggctccacgggacccccgaaggcttttcccgc
acggatttgcacctggctgtggtcccggtgctgacagcgctgatatcctaccacaattac
ctggacaaagccaagcagcgtgaaatcgtgtactgcctggagcacgggctcatctaccgc
tgcgccaaccagtgcgtggtggcactgtccgtgtgcagcgtggagatgcccgacatcatc
atcaaggcactgcccgtcctcattgtcaaactcacccacatttctgccacggccaacatg
gcaatccctctcctggaatttctgtcaactctggccaggctgcctcacctgtaccggaac
tttgcggcagagcagtacgccagcgtcttcgccatctccctgccctacacaaacccctcc
aagtttaaccagtacatcgtttgcctggcccaccacgtgatcgccatgtggttcatccgc
tgccgcctgcccttccgcaaggactttgtcccctacatcaccaagggcctgcgctccaac
gtgctcctgtccttcgatgacaccccagagaaggacagcttcagggctcgcagcaccagc
ctgaatgagaggccaaagagtagtttaagactagccaaaaatgcaaagcaaggcttgaat
aactctcctccagtgaaagagctgaaagaaccctctgcagttgatgccttccgatcccgc
agcatcagtgtgtctgaacatgtggtccgcagccgcatccagacgtccatcaccagctcc
agcctgggctctgcagatgaaaactccatggctcaggctgatgacaacttgaaaaacctg
cacctggagctgacggagacctgcctggacatgatggctcgatacgtcttctccaacttc
accgccgtgcccaagaggtctcccgtgggtgagtttctgctggctggaggaaggaccaag
acgtggctggttggtaacaagctggtgaccatcactacaagtgttggaacagggacgagg
tccctgcttggcctggactctgcagagttccagagcgccccagaatcaagctcagaccct
gttctgcaagtgagacagaccaaggaggctccggccaagctggaatcccaggctgggcag
caggtttgcaggagctcccgcaacagagtgcgatccatgtcgggtggtcatgccttacgt
gttggtgccttagacagctcagcctcccattttcccagtggctcaagttcccaagggaca
cagggccctcctgctcctgctgcccgcccagagaagggcactcctgctccacagacagcc
ctgcagaaggaaaaagccaacctggctgcctacgtgcctctgctgacgcagggctgggca
gagatcctggtgcgcaggcccacaggcaacacgagctggctgatgagcctggagaacccg
ctgagccccttctcctcagacatcaacaacatgcccctgcaggagctctccaacgccctg
atggctgcagaacgcttcaaggagcaccgggagacagctctgtacaaatccctgtccgtg
ccctcctccagcctggccacgggcacggccaagccctcgctgctgcagcgctccaacaca
gtggcctctttctcttccatgtaccagtccagttgtcaagggaagttgcacaggagcata
tcctgggcagaatccgccgtggtgctggaggagggcagcccgggggagatggagctcagg
gaggccgagtcccccgccgagtcccccgagagcgaggacgcggagacctcctgttccgag
cacgtcctgagcgaggagaggtttggaaaaggccaggactcctacagcaggtcctcctcc
acgtccagccaggaagacaagtcgctgaagtcggaggagctggcggagggcgggatcccc
atcgggcgggaggagggccgggcgctggaggagctctccttccagccctcacagcccctc
agcaaatccagctcctccccggagctccagacgctgcaggaggtgctcaaggacgccaac
ggccgggaggtgcccaggaggctgagcacggaagtgaaatccaagtcgcagtcggggaac
ctggaaggggaagggctgggcggctgggcgggcggcgctgagggcggcggcgccgccggg
ccgggcgctgccgccggggctggcgcctcgccccgctcgccctcgggccaccggccccgg
ggctacaccatctccgactcggccccgtccaggaggggcaagaggatcgacagagacgcc
ttcaagggcagggcagcagcgtccaacgcggagaaggtgcctgggataaaccccagcttt
gtgtttttacagttgtaccactcccccttctttggtgatgaaaacaacaaacccctcttg
ttgccaaatgagacgtttgagaggtcggtgcagctcctggatcagatcccatcctacgac
acacacaagattgcagtgctctacgttggggagggccagagcaacaacgagatcgccatc
ctgtccaacgagcacggctcctaccgctacaccgagttcctcacgggcctggggaagctc
atcgagctcaaggactgccagcctgataagatctacctgggtggcctggatgtttgcggg
gaggacggacagttcacctactgctggcacgatgacatcatgcaagccattttccacatt
gctactctgatgcccacaaaggatttggataaataccgctgtgacaagaagaggcacctg
gggaatgattttgtttccatcatttacaatgattctggagaggattttaagctgggcaca
ataaaggggcagttcaattttgtgcacgtgatcatcacccccctggactatgactgtaac
ctggtgacgctgcagtgtcggaaagacatggagggtctggtggacacgagtgttgccaag
atcatctctgacaagaacctgccctttgtggcccgtcagatggcactgcatgccaacatg
gcttcccaggtccaccacagcaggtccaaccccacagacacctacccctccaaatggatt
gccaggctgcgccacatcaagaggctccggcaccggctccgtgaagagacacagtaccag
agccctggccttcccctgcagctgcacccctctgcccccacaaaaccccctccccagatc
ccccaggacccccctccggcctatgagacagggcagaggaagaggctgatctcctccgtg
gacgacttcaccgagttcgtgtag
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