Hirundo rustica (Barn swallow): 120759900
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Entry
120759900 CDS
T09369
Symbol
PPL
Name
(RefSeq) periplakin
KO
K10386
periplakin
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120759900 (PPL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hrt04812
]
120759900 (PPL)
Cytoskeleton proteins [BR:
hrt04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
120759900 (PPL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Plectin
Spectrin
Motif
Other DBs
NCBI-GeneID:
120759900
NCBI-ProteinID:
XP_039935543
LinkDB
All DBs
Position
15:1489906..1517707
Genome browser
AA seq
1763 aa
AA seq
DB search
MHSLFRKRNKGKYSPSVQKKSISSKELTELIERLQKNADQVEKNIVETDSRMQNDLHKIK
ACQLAQYKELTAQKLSESDKLLYVLDGDAAVARHMKHPQGDMITEDIRQLKERVANLRVK
HDQIYNFPLQHIEPQVNWSTVIKEKQDALSSKGFGTDLPLVNSQVEEHNIFHNEVMAIGP
HIVKEGSKENMSEFQAKYQKLLAGSQQRQQDLNSLQDYMQRCTNKLYWLDQQAKDRTHYD
WSDHNLDYPSRRRQYENFIHRKLEEKEEAINKLHADGDQLLAQNHPGKNAIEAHIEAVHA
DWKEYLNLLICEESHLKFMEDFHKFQKDTKDAQELLKKVDTDLDQKFSPEFKDRYQLESL
LRELDDQEKALDKYEAVVKSLQERSQQVLPLRYRRQPPPQPIPVEALCEYEGEQGQISRG
AHYTLRRNSGDVWEVADGAGDTISAPGVCFMIPPPDPEAIALAEQIAKNYVAVKEKTNNC
KNVLQQRYEGLKADSIGDAASVRGRQLLAGLEKVNSDLDKQEKAITANLRPPLEQSRAVQ
DSTERSKDLKNITNEVRRIEPEKTRKIQECEAFIESVPNTGSATLVRNKVENTNKKYERV
VQLLSAAQEKVEVATNLERSLQQGRDLLSTYENKLVIDDTVPEDLRVVDRKKEELLAMGT
ELQSKKFLLSEAEQNLQRTKTCSNTLASKFQEHCPDIERQEAELYKLNQRFNNLSKQIDH
RTQTLQKAKSAYSNYRANYDKVNQFLCNIPNYEPQETDNIQQVEMKLKSQAALLSDIASK
EQEVQKVSVTAQQYQQAVKDYELEAEKLRSILDLENGRNGYTSKKPRLQSPAAKVKEEEA
VLAAKYTEVNAVNKQRLQNLEFAQSLLRQQPEIQVTQDFAQTKKSVRPVEEVWKLKKELE
DETQRRQQLEAEIEAIQNNIVHLQNQKPQETVVKKELVKKVPDPQLEESFHRLQQNLAEE
QRKNQVLQDELEALKIRLRVLEHEKREGGQEYIVKEVLRIEQDKAQAAEILKLKEELEEL
RRQEGTRESEVILLRQQIAVLSSEKNKEQEKVTEKEVLKLQNDPQLEMEFRMLQETKERE
SALRQKHEEELSFLQEKLKRLEKERAIAEGKITVKEVLKVEKDLAIEREVNELRRQYEDE
KSKGRSNEREKAELLRKIQLLEEENSKVVVQEKVREIVRPDPKAENEVANLRLELVEQER
RYRGGDEQLKSCQNELAALKNRGPLVEVKEVIKEVIKYKNDPETEKELQRLREEIIERTG
AIERADLEIYQLKQEIQALKETKPQVQMKEVVQEILQFREDPKTREEVESLRVQLADEQM
KHIDLERERLLQEEKVRQKEEELSQVKEKVVQQEVVKYEQDPALKAEVNSFSQSIESELK
QIDGLREELRKLQRRRSELERQLEELEKERQARREAELEVQRLRIRLNELEEQERETTER
VTVKQKVILQQDPQQEKEHSLLKLELEEEKHRRQVLQTELEALRKKLLSLEKMEVKEKVV
FSESVQVDKGDTEYEIQKLKSNLEEESRRKRELDADINRLETRLSEVEFNNSKSSKELDL
LREENHKLHLEKQNLLMETRRLQSEIELTATEAQDLRNMTHMDSGINLDSRFQALERELE
DLKQLSREKDAEIEQLQNRLKTVAIKREQRENHLRRSIVVIDPDTGKEMSPEEAHVFGLI
EWSLFVKLKSQECDWEEISIKGPNGESSVILDRKSGREFSIEDALKSGRLTAAQYDSYLN
KEMSIQELAVLVSGSNYTALAPL
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgcactcgctcttcaggaaacgcaacaaagggaaatacagcccctccgtgcagaagaaa
agcatctccagcaaagagctgaccgagctcatcgagcgcctgcagaaaaatgctgaccag
gtggagaaaaacatcgtggagaccgactcccgaatgcaaaatgacctgcacaagatcaag
gcgtgccagctggcgcagtacaaggagctgacggcgcagaagctctccgagtccgacaag
ctgctctacgtgctggacggggatgcggccgtggcccggcacatgaagcacccgcagggg
gacatgatcacagaggacatccggcagctgaaggaacgtgtggcaaacctgcgtgtgaaa
cacgaccagatctacaacttccccctgcagcacatcgagccccaggtcaactggtccaca
gtgatcaaggagaaacaggacgcgctgagcagcaaaggcttcgggactgacctgccgctg
gtcaacagccaagtagaagagcacaacatcttccacaacgaggtcatggccatcgggcca
cacatcgtcaaggaaggaagcaaggaaaacatgagcgagttccaagccaaataccagaag
ctgctggccggctcgcagcagcggcagcaggacctgaactcgctgcaggattacatgcag
cgctgcaccaacaagctctactggctggatcagcaggccaaggacaggacccattacgac
tggagcgaccacaacctggactaccccagccggcgccgccagtacgagaacttcatccac
aggaagctggaggagaaggaggaggccatcaacaagctgcacgctgatggggaccagctg
ctggcccagaaccaccccgggaagaacgccatcgaggctcacatcgaggccgtgcacgcc
gactggaaggagtacctgaacctgctgatctgcgaggagagccacctgaagttcatggag
gacttccacaagtttcagaaggacactaaggatgctcaggagcttttgaagaaggtggat
acagacctggaccaaaaattcagcccggagttcaaggacagataccagctggagtctctc
ctccgggagctggatgaccaggagaaggccttggacaagtacgaggccgtggtgaagtcc
ctgcaggagcgcagccagcaggtgctgccgctgcgataccgccgccagccgccgccgcag
cccatcccggtggaggctctgtgcgagtacgagggcgagcagggccagatcagccgcgga
gcccactacaccctgcggaggaacagcggagacgtttgggaagtggccgacggcgccgga
gacaccatcagcgcccccggggtgtgcttcatgatccccccgcccgacccagaagcgatc
gccctggcagagcaaattgccaagaactacgtggccgtgaaggagaagaccaacaactgc
aagaacgtcctccagcagcgctatgaggggctgaaggcagacagcatcggagatgctgca
tcagttcgggggcgccagctcctggcagggctggagaaagtgaacagtgacctggacaag
caggagaaagcaataactgcaaacctccgcccgccgctggagcagagccgggcagtgcag
gacagcaccgagcgctccaaggacctcaagaacatcaccaacgaggtccgtcggatcgag
ccggagaaaacgaggaagatccaggagtgcgaggccttcatcgaatccgtgcccaacacg
ggcagcgccaccctggtgaggaacaaggtggagaacaccaacaagaagtacgagcgtgtg
gtgcagctgctcagcgctgcccaggagaaagttgaggtggccacaaacctggagaggagc
ctccagcaaggccgagatctgctgtcaacctatgagaacaagctggtgatagatgacacg
gtaccggaggacttgagggtggtagacaggaagaaggaagagctgctggccatgggcacc
gagctccagtctaagaagttcctgctcagtgaagccgagcagaacctgcagaggaccaag
acgtgctccaacaccctggccagcaagttccaggagcactgccccgacatcgagcgccag
gaggcagagctctacaagctcaaccagcgcttcaacaacctcagcaagcagatcgaccac
agaacgcagaccctgcagaaagcaaaaagtgcctactccaactaccgcgccaactacgac
aaggtgaaccagttcctgtgcaacatccccaactacgagccccaggagacggacaacatc
cagcaagtggagatgaagctgaagagccaagcggcactgctcagtgacattgcaagcaag
gaacaggaggtgcagaaggtctctgtcacagctcagcagtaccagcaggcagtgaaggat
tacgagttggaagctgagaagctgcggtccatcctggacctggagaacggccggaatggc
tacaccagcaagaagcccaggctgcagtccccagctgccaaagtgaaggaggaggaagct
gttctggcagccaaatacacggaagtgaacgctgtgaacaagcagaggctgcagaacctg
gagtttgcccagagcctcctgcggcagcagccagagattcaggtgacacaagactttgcc
cagaccaaaaagtctgtaaggcctgtggaagaggtctggaagttgaagaaagagcttgag
gatgagactcagcgccggcagcagctcgaggctgagattgaagccattcagaacaacatt
gtccacctgcaaaaccagaagccccaagaaacggtggtgaagaaagaactggtgaagaag
gtgcctgacccccagctggaggagagcttccaccgactgcagcaaaacctggcagaggag
cagcgcaagaaccaggtgctccaggatgagctggaggctcttaaaatccggctgcgtgtc
ctggagcacgagaagagggaaggagggcaggagtacatagtgaaagaggtgctgaggatt
gaacaagataaggctcaggctgccgaaatcctgaagctcaaagaggaactggaagagctc
aggaggcaggaagggaccagggagagtgaagtcatcctcttacgccaacaaattgctgtg
ctgtccagcgagaagaacaaagagcaggagaaagtcacggagaaggaggtgctgaagctg
cagaacgatccccagctggagatggaattccggatgttgcaggagaccaaggagagggag
agcgcccttcggcagaagcacgaggaagagctcagcttcctccaggagaagctcaagcgt
ctggagaaggaacgggccatcgccgagggcaaaatcaccgtcaaggaggtgctgaaggtg
gagaaggatttggccattgagagggaggtgaacgagctccggcgccagtacgaagatgag
aagtccaagggccgttccaacgagcgggaaaaggctgagctgctcaggaagatccagctg
ctggaggaagagaactccaaagtggttgttcaggagaaagtgcgtgagattgtgcgccca
gaccccaaggctgagaacgaagttgcgaaccttcgcttggagctggtagagcaggagagg
aggtaccgcggtggggacgaacagctcaagagctgccagaacgagctggctgctctgaag
aacagagggcccctggtagaagtcaaagaagtcattaaggaggtcattaagtacaagaat
gatccagaaaccgaaaaggagctacagcgactccgggaggaaatcatagagaggaccgga
gctatcgaaagagctgacctggagatctaccagctgaaacaagagatacaagctttgaaa
gaaaccaaacctcaagtgcaaatgaaggaagttgttcaagaaatcctccagtttcgggaa
gaccccaagactagagaggaggtagagtcgctgcgagtgcagctggcagacgaacagatg
aagcacatcgacctggagagggaacggcttctccaagaagaaaaagtaagacagaaggag
gaagaactttcccaggtgaaggagaaagtggtccagcaagaagtagtgaagtacgagcag
gatcctgccttgaaagctgaggtgaactccttctcccagagtatcgagagcgagctgaag
cagatcgacggcctccgtgaggagctgcgcaagctgcagaggagacgctccgagctggag
cggcagctcgaggagctggagaaggagaggcaggcacgcagggaggccgagctggaggtc
cagaggctcaggatccggctgaacgagctggaagaacaggaaagagaaacgacagaacga
gtgactgtgaaacagaaagtgatccttcagcaagatccccagcaggagaaggagcactcg
ctcctcaagctggagttagaagaagagaagcaccgcagacaagtcctgcaaaccgaacta
gaagccctgagaaagaagctcctttctttggagaagatggaggtcaaggagaaagtggtc
ttttcagagagtgtccaagtggacaaaggagacacagagtacgagattcaaaagctgaag
agtaacctggaggaagaaagtaggcgcaagagggagctggatgcagacatcaaccgcctg
gaaaccaggctgtccgaggtggaattcaacaactccaagtcatcaaaggagctagacttg
ttgagggaggaaaaccacaagctccacctcgagaagcagaacctgctgatggaaacaagg
agactgcagtcagagattgaactcaccgcaacagaagctcaggatttgagaaacatgacc
cacatggacagtggaataaacctggactccagattccaagctttggaaagagagttagag
gatctgaagcagttatccagagaaaaagatgcagagattgagcaactccagaatcgcctg
aagacggtggctatcaagagggagcaaagagagaaccacctgaggcgctccatcgtggtc
attgaccccgacacaggaaaagagatgtctccagaggaagctcacgtgtttggcctcatt
gagtggagcctgtttgtcaagctgaagagccaggaatgtgactgggaggagatctcaata
aagggtcccaacggggaatcgtctgtgatcctggacaggaagtctggcagggagttctcc
atcgaggacgcgctgaagagcgggaggctcaccgcagcccagtacgacagttacctcaac
aaggagatgtctatccaggagctggcagtcctggtgtccggaagcaattacacagcgctc
gctccactttag
DBGET
integrated database retrieval system
