Hirundo rustica (Barn swallow): 120759997
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Entry
120759997 CDS
T09369
Symbol
STAU1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrt01009
]
120759997 (STAU1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120759997 (STAU1)
Protein phosphatases and associated proteins [BR:
hrt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120759997 (STAU1)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120759997 (STAU1)
mRNA cycle factors
Stress granule specific factors
120759997 (STAU1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
120759997
NCBI-ProteinID:
XP_039935767
LinkDB
All DBs
Position
16:411338..435995
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AA seq
696 aa
AA seq
DB search
MSQVQIQNPSAALAGSQILNKNPSLSQPLSIPSTTSSLPSENAGRPIQNSALPSASVTST
NAAAAPSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWE
AEGTSIKKAQHAAAAKALEGTKFPKPTARPSRSEGKNPDSVTPTVELNALCMKLGKKPLY
KPIDPYTGMRSTYNYTMRGGTYPPRYFYPFPVGPLLYQVELSIGGQQFHGKGRTRQAAKH
DAAAKALKVLQNEPLPEKPEVNGKEPDDENLNKSEISQVFEIALKRNLPVNFEFFPLKQV
TKESGPPHMKSFVTKVSVGEFMGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKPR
IKKKTKSIVKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYMLITERGLPRRREFVMQVK
VGVHTAEGMGTNKKVAKRNAAENMLEILGFKVPQPQPPKPALKTEEKTPVKKPGDGRKVT
FFEPGSEETSASNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGASQGHHTKEFSRAAPN
PAKATVTAMIARELLYGGTSPTAETILKSNNSSGHVPHGPLTRPSEQLDYLSNVQGIQVE
YKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQTTEMPR
TGNGPMSVCVKQEMESDPLLKPASANPLGQTLDSTA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagttcagattcagaatccttctgctgcccttgcagggagccaaatactgaat
aaaaacccatctctttcacagcctttgagtattccttctactaccagttctttgccctct
gaaaatgcaggcagacctatccagaactctgctttgccttctgcttcagttacatccacc
aatgcagctgcagctccttcaaacatggcaaaccccaaagagaaaacccccatgtgtctt
gtgaatgaattagcccgtttcaacaagattcagcccgagtataagcttctgagtgagcaa
ggtccagctcattctaaggtgtttacagtgcagctgactcttggggaccagcattgggaa
gctgaaggaacgagtattaaaaaagcgcaacacgcagcagctgccaaagctttggaaggg
acaaaattccctaagcctacggctcgtccatctcgtagtgaaggcaagaatccagacagc
gtaacccccacagtggagctgaacgccctttgcatgaagctggggaagaagcccttgtac
aaacccatcgacccttacacggggatgagatccacctacaactacaccatgcgagggggc
acctacccgccgcggtatttttacccatttcctgttgggcctttactttatcaagtggag
ctttcaattggagggcagcagtttcatgggaagggaagaacaagacaagctgctaagcat
gatgcagctgctaaagctctgaaagttctgcagaatgagcccttgcctgagaaaccagag
gttaacgggaaagaaccagatgatgaaaatctcaataaatctgaaataagccaagttttt
gagattgcacttaaaaggaacttgcctgtgaattttgagtttttccctctgaaacaggtg
accaaggaaagtggtcctccccatatgaagagttttgtaaccaaggtatcagttggagaa
ttcatgggtgaaggtgaaggaaagagcaagaagatctcaaagaaaaatgctgcaatagca
gtcctagaagaactgaaaaaattgccaccccttcctacagttgagaaaatgaagccacga
atcaaaaagaaaacaaaatcaatagtgaagctgcaaacaagtccagaatatggtcaagga
atgaatcccattagcagacttgcccagatacagcaggccaagaaggagaaggaacctgag
tacatgctgatcacagaacgtgggctgcccaggcgcagggaattcgtcatgcaggtgaaa
gttggtgtacacacagctgaaggaatgggcacgaacaaaaaagttgctaaacgcaatgca
gctgaaaatatgttggaaattttaggtttcaaagtccctcaacctcagcctccaaaacca
gcattaaagacagaagagaagaccccagtgaagaaaccaggtgatggaagaaaagtaacc
ttctttgagccgggctctgaagagacttcagctagtaataaagaagatgagtttaggatg
ccttatctcagccatcagcagcttcctgctggaattcttcccatggtccctgaggttgcc
caggctgtgggagccagtcaaggacaccacaccaaagagttcagccgggcggctcccaac
cccgccaaggccacggtgacggcgatgatcgccagggagctgctctacgggggcacctct
cccactgctgagaccattctgaagagcaacaactcctcaggccacgtgccccacgggcct
ctcaccaggccctctgagcagctggactacctttccaacgttcaaggaatccaggttgaa
tataaagactttccaaaaaataacaagaacgagtttgtatctcttataaactgttcctct
cagccaccgctgatcagtcatgggattggaaaggatgtggagtcttgccacgacatggct
gcactgaatattttaaagttgctgtctgagttggaccaacaaaccacagagatgccaagg
acaggaaatggaccaatgtctgtatgtgtgaaacaagaaatggaaagtgaccctctcctc
aaaccggcgagcgcaaaccctttgggacaaacactggacagcactgcctga
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