Hirundo rustica (Barn swallow): 120760006
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Entry
120760006 CDS
T09369
Symbol
CHRNA4
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal acetylcholine receptor subunit alpha-4
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04080
Neuroactive ligand-receptor interaction
hrt04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120760006 (CHRNA4)
04082 Neuroactive ligand signaling
120760006 (CHRNA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120760006 (CHRNA4)
Ion channels [BR:
hrt04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120760006 (CHRNA4)
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
120760006
NCBI-ProteinID:
XP_039935792
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Position
16:complement(6015576..6036836)
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AA seq
624 aa
AA seq
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MGFLVPRGNLLLLLCAIIFPAFGHVETRAHAEERLLKKLFSGYNKWSRPVANISDVVLVR
FGLSIAQLIDVDEKNQMMTTNVWVKQEWHDYKLRWDPQEYENVTSIRIPSELIWRPDIVL
YNNADGDFAVTHLTKAHLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYD
KAKIDLVSMHSHVDQLDYWESGEWVIINAVGNYNSKKYECCTEIYPDITYSFIIRRLPLF
YTINLIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPL
IGEYLLFTMIFVTLSIIITVFVLNVHHRSPRTHTMPDWVRRVFLDVVPRILFMKRPSTVK
DNCKKLVESMHKITNAPRLWSEMDVEPNFTTSSSPSPQSNEPSPTSSFCAHLEEPAKPQP
ICKSPSGQYSLLHPEPVQVTCSSPQPSCHPLSNTQAASALKGRSLSVQQMYSPNKAEEGT
IRCRSRSIQYCYLREDSSQTNGHSSGSPASQRCRLNGEQPQHKPPQCRCKCKKGEAAGTA
AQGSKSHGAKEQHLVLMSPALKLAVEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFL
WMFIIVCLLGTVGLFLPPWLAGMI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggatttctcgtgccgaggggaaacctcctcctcctgctgtgtgccatcattttcccc
gcctttggccacgtggagacccgagcccacgcggaggagaggctcctgaagaagctcttc
tctggttataacaaatggtcgcgtcccgtggccaacatctcggacgtggtcctcgtccgc
ttcgggctgtccatcgcccagctcatcgacgtcgatgaaaaaaaccaaatgatgaccacg
aatgtgtgggtgaagcaggagtggcacgactacaagctgcgctgggacccgcaggaatac
gaaaatgtcacatccatccgaatcccctcagagctcatctggaggccagacatcgtcctt
tacaacaatgctgacggtgactttgcagtcacccacctgaccaaggctcacctcttctac
gacgggaggattaaatggatgccccctgctatctataaaagctcctgcagcatcgatgtc
accttcttcccctttgaccagcaaaactgcacgatgaagtttggctcctggacctacgac
aaagccaagatagacttggtgagcatgcacagccacgtggaccagctggactactgggag
agcggggagtgggtcatcatcaacgccgtgggcaactacaacagcaagaaatacgagtgc
tgcacggagatctaccccgatataacttattccttcattatccggaggctgccgctcttc
tacaccatcaacctgatcatcccctgcctgctgatctcctgcctgaccgtcctggtcttc
tacctgccctctgagtgtggagagaagataaccctgtgcatctctgtgctgctgtccctc
acagtgttcctgctgctcatcaccgagatcatcccgtccacctccttggtgatccctctg
attggggagtacctgctcttcaccatgatattcgtcaccttgtctatcatcatcaccgtc
ttcgtgctcaacgtgcaccaccgctccccccgcacccacacgatgccggactgggtcagg
agggtcttcctcgacgtagtcccccggatccttttcatgaagcgcccctccacagtgaag
gacaattgcaagaagctcgttgagtccatgcacaaaataaccaacgcaccgaggctttgg
tccgagatggacgtggaacccaacttcactacctcatcctcccccagcccgcagagcaac
gagccgtcacccacctcgtccttctgtgcccacctcgaggagccggccaagcctcagccc
atctgcaagtccccgtctgggcagtactccctgctgcacccagagcctgtccaggtgacc
tgctcctctccacagccctcctgccaccccctgagcaacacccaggccgcctctgccttg
aaaggcaggtcgctgagcgtccagcagatgtacagccccaacaaggcggaggaggggaca
atccgctgcaggtcccggagcatccagtactgctacctgcgagaggactcttcccagacc
aacggccactccagcggctctccagcatcccagcggtgccgcctcaacggggagcagccc
cagcacaagccccctcagtgccggtgtaagtgcaaaaagggcgaggcggccggcacggca
gcccagggcagcaagagccacggtgccaaagagcagcacctggtgctgatgtccccagcc
ctgaagctggcggtggaaggggttcactacatcgcagaccacctgcgggcggaggacgcc
gatttctcagtgaaggaagactggaagtacgttgcgatggtcatcgacaggatcttcctc
tggatgttcatcattgtgtgcttgctgggaactgttgggctctttctcccaccgtggctg
gcaggaatgatctaa
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