Hirundo rustica (Barn swallow): 120760027
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Entry
120760027 CDS
T09369
Symbol
RBL1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04110
Cell cycle
hrt04218
Cellular senescence
hrt04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120760027 (RBL1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120760027 (RBL1)
04218 Cellular senescence
120760027 (RBL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120760027 (RBL1)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
120760027 (RBL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
eIF-3c_N
TFIIB
Motif
Other DBs
NCBI-GeneID:
120760027
NCBI-ProteinID:
XP_039935851
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All DBs
Position
16:complement(14470553..14496441)
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AA seq
1053 aa
AA seq
DB search
MSRPGAADPGAAVERLCRELNLDAASAAEALRDFTALRGTYSLEGEALHWLVCALYVACR
RSRVPTVGSSPMEGNGVSLTRILRSARLSLIQFFSKMKKWMDMSNLPQEFRERVERLERN
FEVSTVIFKKFGPIFFDIFQNPFEETTKLHRSRKQRRVPCSIKDLFNFCWTLFVYTKGNF
RMIGDDLVNSYHLLLCCLDLIFANALLCPNRRDLLNPSFKGLPVEFHTLEMKASEDPPCI
IAMLCELHDGLLVEAKGIKEHYFKPYIAKLFDRKILKGDCLLDLCNFTENSKALNKEYEE
YVLTVGDFDERVFLGAEAEEEIGTRKFPADLPGEKTAARAHMECHLQQHFEKKRSFAPST
PLTGRRYLREKEATITPVASATQSVSRLQTMVAGLKNAPSEQLTAIFESCARSPLESIMS
RVKEIGETFCCSYTQSTDDQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGKDLT
ALLEQDLFHRSLLACCLEIVLFAYSSPRTFPWIIEVLDLRPFYFYKVIEVLIRSEEGLSR
DMVKHLNSIEEQILESLAWTRNSALWSALEASGNKVPTCEEVIFPSNFEASNGGSGFGHL
PMMPLSPIIHPRVKEVRTDLGGSLRRDMQPLSPISVHERYSSPTAGSAKRRLFGDDSPKE
MQMEKILTKGTKLTIAPASSIGAENMSSSPAQTVLTMTTTTGPGKARQKVTIPLHGIAND
MGGITLIPISMNLGQPCQVDGQAPCPPPGSQAHEVQLPAAGKPKRTGSLALFYRKVYHLA
SVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEER
TFQDIMKSYRNQPQANSHVYRSVLLRNTSDDVLLDKNANPDTEMTEDSSVKAGSSSGRSA
AANSSESETEERGDLIKFYNTVYVGRVKSFALKYDITNQDHVVEAPPLSPFPSIRQQPVS
PRRISQQHSVYVSPHKNGACLTPRSALLYKFSGSPSKSLKDINNMIKQGEHRSKKRAITI
DSDTESPTKRLCQENDDVLLKRLQDVVSERANH
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcccgggggccgccgatcccggcgccgccgtggagcggctctgccgggagctc
aacctggacgcggcgagcgcggccgaggcgttgcgcgacttcacggcgctgcggggcacc
tacagcctggagggcgaagcgctgcactggctggtctgcgcgctctacgtcgcctgccgc
cggagccgcgtgcccaccgtggggagcagcccgatggaggggaacggcgtctccctgacc
cgcatcctgcgctccgcacgcctcagtttaattcagttttttagcaaaatgaagaagtgg
atggacatgtcaaacctgccccaggaattccgagaacgagttgagaggctggagagaaat
tttgaagtgtcaactgtgattttcaaaaagtttggaccaatattttttgatatatttcaa
aacccttttgaagaaactaccaaactgcatcgaagcaggaaacagaggcgggtgccatgc
agcatcaaagatctgttcaacttctgctggactctctttgtgtacactaagggtaatttc
cgtatgattggagatgatttagtaaattcctatcatttacttctgtgctgcttggacctg
atttttgccaatgcccttctgtgtccaaacagaagagatttgctaaatccgtcatttaaa
ggcttaccagtggagttccacactctggagatgaaagcctctgaggatcctccctgcatc
attgccatgctctgcgagctgcacgatgggctcctcgtggaagccaagggcataaaggag
cactacttcaaaccatacattgcaaagctctttgataggaagatcttaaaaggagattgt
ctgttggatctttgcaactttacagaaaatagtaaagcactgaataaagagtatgaggag
tatgttctgaccgtgggtgactttgatgagagagttttcctgggagctgaagctgaagaa
gaaattggcactcgaaaattccctgcagatttgccaggagagaaaacggcagcaagagct
cacatggagtgtcatctgcagcagcattttgaaaagaaaaggtcgtttgcaccttcaact
cccctgactggcagaagatacctgcgagaaaaggaagctaccatcactcctgtggcttcg
gccacacagagcgtgagccgtttgcagaccatggtggctgggttgaaaaatgcaccaagt
gaacaacttacagctatttttgagtcttgtgcccgcagccccttggaaagcatcatgagc
agagtgaaggaaattggtgagaccttctgttgcagctacactcagtcaacagatgatcag
ccaggatctcacatagattttgctgtaaacagattaaaactggcagagatcttgtactat
aaaatcttggagactataatggtgcaagaaacacggagactgcatgggaaggatctgact
gctctcctggaacaggatctctttcaccgctccctcctggcgtgctgcttggagattgtg
ctcttcgcttacagctcccctcgcaccttcccctggatcattgaagttcttgacctcagg
ccattctatttctataaggttattgaagtgctgattcggtctgaggaggggctttccaga
gacatggtgaagcacctcaatagcattgaggaacagattctggagagtctggcctggact
cggaactcggcactctggagtgcactcgaggcctcaggaaacaaagtcccgacctgtgaa
gaggtaatatttcccagtaattttgaggccagcaatggaggaagtgggtttgggcacttg
cccatgatgccattatctcccataattcatcctcgagtgaaagaggttcggacagatctt
ggtgggagtttaagacgagacatgcagccattgtctccaatctctgttcacgagcgctac
agttctcctacagctggaagtgctaagagaaggctctttggagatgacagccccaaagaa
atgcagatggaaaagatactaacgaaaggaactaagctgacaattgctccagcatccagc
attggtgctgaaaacatgtcatcatctcctgcccagacagtgctgactatgacaaccact
acaggaccaggaaaagcgagacagaaggtcactatcccactgcatggtattgcaaatgac
atgggtggaatcaccttgatccccatttcgatgaatttaggccagccatgtcaagtggat
gggcaggctccctgtccccctcctgggagccaagcacacgaagtgcagctgccagcggcc
ggcaaaccgaagaggacaggctccttggcactgttctacaggaaggtgtatcatctggca
agtgtgcgcctgcgtgatctgtgcttaaaactggacgtttcaaatgacttgcgcaggaag
atctggacatgttttgaattcacgttggttcattgtcctgatcttatgaaagacaggcat
ttggaccagctcctcctctgcgctttttatatcatggcaaaggtaaccaaagaggaaaga
acttttcaggacataatgaaaagttacagaaatcagccacaagcaaacagccatgtttat
aggagtgtcttgttgagaaatacttctgatgatgtcctattggacaaaaatgcaaaccca
gatacggagatgacagaagactcatccgtgaaagctggcagctcctcgggacggtctgca
gcggcgaactcgagtgagtcagaaacagaggagagaggagatctcattaaattttacaac
acagtctatgtaggaagagtaaagtcgtttgcactgaagtatgatatcacaaaccaggat
catgtggtggaagcgcctccgctgtcgccgttccccagcatccggcagcagccggtgtct
ccccggcgcatctcccagcagcactccgtgtacgtgtcgcctcacaagaacggcgcctgc
ctcacgcctcgaagtgctctgctctacaaattcagcggcagcccgtccaagagtttgaaa
gacatcaacaatatgataaagcaaggtgaacacaggagtaagaagcgagcaataacaatt
gacagtgacactgaatcccccacgaagcgactctgccaggaaaatgatgatgttctacta
aaacgcctgcaggatgttgtcagtgaaagagccaatcactaa
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