KEGG   Hirundo rustica (Barn swallow): 120760213
Entry
120760213         CDS       T09369                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor RAE1
  KO
K14298  mRNA export factor
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt03013  Nucleocytoplasmic transport
hrt05164  Influenza A
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120760213 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    120760213 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrt03019]
    120760213 (RAE1)
   03036 Chromosome and associated proteins [BR:hrt03036]
    120760213 (RAE1)
Messenger RNA biogenesis [BR:hrt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120760213 (RAE1)
Chromosome and associated proteins [BR:hrt03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120760213 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_C Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_RSE1_2nd Beta-prop_EIPR1 Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_SPT8 PepSY
Other DBs
NCBI-GeneID: 120760213
NCBI-ProteinID: XP_039936147
LinkDB
Position
16:2742152..2749695
AA seq 368 aa
MSLFGSPSGFGTGGTSMFGSTTADNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVH
PMAAVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgttcggttcaccatcggggtttggtaccggaggtaccagcatgttcggcagc
acgacagcagataaccacaacccgatgaaggatattgaagtaacatctccacctgatgac
agcatatcttgtttagcatttagtccaccaacgctgccaggcaatttcctcattgcagga
tcatgggcaaatgatgttcgctgctgggaagttcaggataacggacagacaattccaaag
gctcagcagatgcacacagggcccgtcctagatgcctgctggagtgatgatgggagtaag
gtatttactgcttcctgtgataaaactgccaaaatgtgggatctcaacagtaatcaagca
attcagattgcacaacatgatgctcctgtgaagactatccactggattaaagcaccaaat
tacagctgtgtgatgacaggaagctgggacaaaactttgaagttctgggatacccgttca
ccaacacctatgatgacactgcagctccctgagagatgttactgtgcagatgtggttcat
cccatggcagctgtggccactgcagaaaggggtttgatagtttatcagttagagaaccaa
ccctccgaatttagaagaatagaatctcctctgaaacaccagcatcgctgtgttgctatt
ttcaaagacaaagtgaacaaaccaactggatttgcccttggaagtattgaaggcagagta
gctattcattatatcaaccccccaaaccctgcaaaagataatttcacttttaaatgccat
cgctccaatggaacaaacacatcagcacctcaggacatctatgctgttaatgggattgca
ttccaccctgtccacggtactctggccactgtagggtctgatgggagattcagcttttgg
gataaagatgcacggacaaagctaaaaacctcagagcagctggaccagccaatatctgcc
tgttgtttcaaccacaatggcaatatatttgcttatgcttccagctatgattggtcaaag
ggtcacgaattctataacccacagaagaaaaactacatttttctgcgaaatgcagcagaa
gagctgaagcccaggaataagaagtag

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