Hirundo rustica (Barn swallow): 120760219
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Entry
120760219 CDS
T09369
Symbol
RBM39
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120760219 (RBM39)
Spliceosome [BR:
hrt03041
]
Common components
Common spliceosomal components
General mRNP proteins
120760219 (RBM39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
DUF2332
Motif
Other DBs
NCBI-GeneID:
120760219
NCBI-ProteinID:
XP_039936156
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Position
16:14966277..14996330
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AA seq
522 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKDRRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAVLYKPLATQCFQL
SNMFNPQTEEEAGWDTEIXDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccatgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccatgacagaaagaggagcagaagtaaggagcgcaaacggagccgagat
cgggaacggaaaaagagcagaagccgggaaaggaaacggagcagaagcaaagatcgcaga
cgcagccgatctaggagcagagatcgcagattcagaggccgctatagaagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgtcgctccagaagcaaaagtcctttcagaaaagataaaagccctgttagagaa
cctattgataatcttacccctgaagagagggatgctcgaacagtgttctgtatgcagttg
gctgcaagaattcgaccaagagacctggaagaatttttctctacagtagggaaggttcgt
gatgtgcgaatgatttcagatagaaattccagacgttcaaagggaattgcttatgttgaa
tttgttgatgttagttcagtgcccctggcaataggactgactggacagagagtcctgggt
gtgcctatcatagtacaggcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatctgcagaagggcagtgctggtcctatgaggctctatgtgggatcattgcacttcaac
ataactgaagatatgcttcgaggaatcttcgagccatttggcaggattgaaagtattcag
ctcatgatggacagtgaaactggacgctcaaaaggatatggattcattacgttctcagac
tctgagtgtgccaaaaaggccctggaacaactcaatggatttgaactggctggaaggcca
atgaaagtcgggcatgtaactgagcgtactgatgcttccagtgctagctcatttttggat
agtgatgagttggaacgaactggaattgacttgggaacaactggtcgtcttcagctaatg
gcaagactcgcagaaggtactggtttgcagattcctccagctgcacagcaggctctgcag
atgagtggatctttggcctttggagctgtgacagatttacaaacaagactgtctcaacag
aatgaagttctggctgcagctgttctgtacaaaccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggacacagaaattnaagat
gatgtgattgaggaatgtaacaaacatggaggagttatccacatctacgttgacaaaaat
tcagctcagggcaatgtgtatgtcaaatgtccctccatcgctgctgccatcgcagctgtc
aatgctttgcatgggaggtggtttgcaggtaaaatgattacagcagcgtatgtacctctt
ccaacataccacagccttttcccagactctatgactgcaacccaattactggttcctgtt
cgacgatga
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