Hirundo rustica (Barn swallow): 120760257
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Entry
120760257 CDS
T09369
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120760257 (CTCFL)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120760257 (CTCFL)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120760257 (CTCFL)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120760257 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
Zf-C2H2_ZNF451
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
DUF7129
zf-C2H2_7th_ZNF462
zf-C2H2_11
zf-C2H2_15
zf-C2H2_ZN142
C2CH-3rd_BIRD-IDD
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
120760257
NCBI-ProteinID:
XP_039936229
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Position
16:complement(2830767..2840930)
Genome browser
AA seq
366 aa
AA seq
DB search
MAQTLRDGICVFYDLELAQIRVLQAEGQEKSAESKATEKSPDTLMMEVQIDRDNDAIAFE
NNIQQLSPAEEGEGKEVFSTGGETKSQSCKGGDDLSDLLNESKEQEYPASSEQTVVRNLK
NLKFEVRAPHQEEVKLSSLRHHLKTHSDEKRHVCHLCPKAFRTATLLHNHVNTHTGNKPH
KCSECDTAFVTRGELSRHRRYKHTLEKPFKCTICEYSSVEASKMRRHVRSHTGERPYPCH
LCSYASKDAYKLKRHMLTHTGEKRYECYVCQARFTQSGTMKIHMLQKHGENVPKHQCPHC
STFLSRKSDLGVHLRNLHSYMEEAVRCRDCEAAFHERYAFLQHRKTHRNEKRFRCAQCSC
TCNQLP
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaccctgcgcgacggcatctgcgtgttctatgacttggagctggcgcagatc
cgtgttttgcaagcagaagggcaagaaaagagcgcagaaagcaaggcgacggagaaatca
ccagacacgctcatgatggaggtacaaattgacagagataatgatgccattgcatttgaa
aataacatccagcaactgagcccagctgaagagggagaaggaaaggaagttttttccact
ggtggggaaacaaagagccagagctgcaaagggggtgatgatttgtcagacttactcaat
gaaagtaaagagcaggaatatccagcttcatcagaacaaacagttgtaagaaatctgaag
aatctaaaatttgaggttcgtgctccacatcaggaagaagtcaagttatcaagtcttagg
catcatttgaaaactcattcagatgagaaacgtcacgtgtgtcacctctgcccgaaggcc
ttccgtacagcaactctgctgcataaccatgtgaacacacatacagggaacaaaccccat
aaatgcagtgagtgtgacacagcctttgtcacccgaggggagctttcacgacacaggagg
tacaaacacactttggagaagcctttcaagtgcacaatttgtgaatactccagtgtagaa
gccagcaagatgaggcgccacgttcgctcgcacacgggagagcggccctacccctgtcac
ctgtgcagctatgcaagcaaagatgcctacaaactgaaaaggcacatgttaactcacaca
ggtgaaaaacgctatgaatgttacgtttgccaagccagattcactcaaagtggaaccatg
aaaattcatatgttacagaagcatggagaaaatgtgccaaaacaccagtgtccacattgc
agtactttcctttcccgaaaaagtgatttgggtgtccacctgaggaatctgcattcctac
atggaagaggcagtgaggtgcagggactgtgaggcagctttccacgagcgctacgccttc
cttcagcacaggaagactcacaggaatgagaaaagattcaggtgtgctcagtgcagctgc
acatgtaaccagttgccctga
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integrated database retrieval system