Hirundo rustica (Barn swallow): 120760287
Help
Entry
120760287 CDS
T09369
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120760287 (CHD6)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120760287 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Chromo
Helicase_C
BRK
ResIII
HTH_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
120760287
NCBI-ProteinID:
XP_039936265
LinkDB
All DBs
Position
16:complement(14500419..14592103)
Genome browser
AA seq
2789 aa
AA seq
DB search
MVGPKSSKEVLGSVQHCMPPSLKALSLSPMSSAWECKTRDTFASGEEQDEVTHHVTVTAT
NTGDQCQCSKEEPNGAPQKWTNTQNGMQDSGGTGVKKKRKKKDLGEQEGGDKAAVEVKPK
RRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSESAPRSRPK
KISKDTPVEKKKKGKRKNEISVTSLDLDQDILSPSVQSPEESVESADSQKRRSGRQVKRR
KYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQK
EAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTE
PDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIK
EFEALQIPPEIKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNR
KNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVY
HGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDE
AHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEF
GDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF
SFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHCPEAPDFQLQAMI
QAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQ
AAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQS
KAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKG
AYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDD
PNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERP
TRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLV
YCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIK
NADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARE
LDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKL
LSAEQGVSDGAQDAAERGSVEKEEGSGEKLEGLSKQEDIVAVGEGEASEKRDEPAAAQDG
SDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPPRTEMLVPGNHGYWLQDEMFRRASEM
DSVNKEMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYF
YSFVAMCKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLH
ERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHK
RTGLPGPETLCCLYQSNSKLYGSPVYGRLDQTCETLENEAESHIKLETMDSTMSQAGGSP
LDTNCETFMSEVRDIISSNYDESSLPDSLVCMMYDEKACPSEQSSLARDSPSCADVGSSV
AKLSESKLEGDEDPSSCDADAMREAPFLEGLQVGSDRMDDEEAEPSPSTPESNPSQSAPA
ELGKGLEQKGALASPAAGLPEHGAVERVLSVGLYSPSLHNYELKVPPEQRFISLLQEKGL
EAKSGPSQSHSEEDEEEEEDDDNSEAAADAVESLNGPRIGADCDPEAHKLGGEEQSSVLP
TPNATCPEDINGKRESLGLGEPGAEGREDCGLNEESTQQHSPGQAQSQPFSLPTPLPQGG
PQGAEAPCVRGKPLGRDAEGQTGCTEAAHPEPQGIKQEECENRDDGEKASSNQSQDGTEK
YSEEENKNSASVLPGEIDDLQDTRAPTIAQLLQEKTLYSFSEWPKDRVIISRIDNICHAI
LKGKWPSSSQQFEAQSLLTAPAMASNTSSRSSFTESEAPDPNFSNGVLMSRVQKEGFLSP
AFAKDERKHRRPYEFEMERDVKQRSLEQLAAAHVHPPIVLNGWREAAVDLSRASDGSLGS
SSPFPLNANMPKLGTVNALQSSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRG
RRKNVEGMDLIFLKERPLPNRLQELSKEDEEDKILLHPFSFRPGIHSKNGARPVPLDHFR
SDLRGSWSSWCSKCFLDVQEDQPQPPQNSPLPDGPVAASSAPQPVPAAGQEKAVPNKSLL
DWLRQQSDYTLDVPSFGTNFSDKPKQRRQRCKDPNKLDISSLTGEERVPVVHKGTGRRLG
GATAPALKELPRWLDANLEYAVAADWADIVKLSGYLPENKFNRILTEPVLRDTGPRRRGR
RPRSELLKGPGVVADSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAA
VPAGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNSPMTTTCTATAPTSLTSTTKGGTAG
AEKANEEKQGSQDGKKEPLAEDKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSPGLIYP
SMFLSPGIGMALPGIQQTRHSEAANLETQKRKRKKVKGELANPEPETVSLPEKEAANSQN
CVEQSLPAVAEKEQDGPAEEERQAAHDTD
NT seq
8370 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaccaaaatcctctaaggaagtgttgggctctgtgcagcactgtatgccgcca
agcctaaaagcactgagcctctccccaatgtcgtctgcctgggagtgcaagacacgggac
acctttgccagcggtgaagagcaggacgaggtgacccaccacgtgacagtgacagccaca
aacacaggtgaccagtgccagtgctcgaaggaggagcccaacggggctcctcagaagtgg
acaaacacccagaacggcatgcaggacagtgggggtacgggggtgaagaagaaacggaag
aaaaaggatctgggagagcaggaagggggagataaagcagctgtggaggtgaaaccaaag
aggaggagagagcctaaagaaccaaaagagcctaaaaaggtgaaggagtctaagaagccg
aaggaacccaagcagagggaggtggctaagaagccccggaaacctcgggaacccaaagcc
ccaaaggagcctaaagacaagaagagtggctctgagtcagcccccagatcaagacccaag
aagatcagcaaagacacccctgtggagaagaagaagaaagggaagaggaaaaatgagata
tcagtgaccagtttggatttggatcaggatatcctgagcccatctgtacaaagcccagag
gagtctgtggagtcagctgacagccagaaacgacgctcaggaaggcaggtgaagaggaga
aagtacaacgaggacctggatttcaaggtcgtggatgatgatggagagacaattgccgtg
ctgggagctggacgaacctctgcgctctctgcctctactctggcgtggcaggcagaggag
cctcctgaggatgatgccaatatcattgagaagatccttgcctccaggatggtgcagaag
gaggctcatcctggaggcctggcatttgagacagaggagttctacgtcaagtacaggaac
ttctcttacctccactgtaaatgggcaacactggaggagctggagaaagaccccaggatc
tcgcagaagataaagcgcttccggaacaagcaggctcagatgaaacatatttttacagag
cccgatgaggatttgttcaacccggactacgtggaggtagatcgaattctggaggtggct
cacacaaaggaccctgacactggggaggaggtgactcactacttggtgaagtggtgctca
ctgccctatgaggagagcacctgggagctggaggaggatgttgacccagggaagattaaa
gagttcgaagccctccaaatccctccagaaatcaagcacatggtaacgtaccctgaggag
cgcccagcgtccgagtcctggcagaagctggagaagtcccgcgagtacaagaacagcaac
cagctgcgggagtatcagctggagggaatgaactggctgctctttaactggtataacagg
aagaactgcatcctggctgatgagatggggttggggaagacaatccagtcaatcactttc
ctctcagagatattcctgatgggcatccatggccccttcctcatcatcgcacctctctcc
accatcacaaactgggagagggagttccgcacctggacagagatgaacgccatcgtgtac
catggcagccagatcagccggcagatgatccagcagtacgagatggtgtacagggacaca
cagggtaaccctctccctgggatcttcaagttccaggtggttatcaccacctttgagatg
atccttgctgactgcccagagctgaagaagatccagtggcgttgtgtggtcattgatgag
gcacatcgcctgaagaacaggaactgcaaactcctggaggggctgaagctcatggccctg
gagcacaaggtgctgctgacagggacccccctgcagaactcggtagaggagctcttcagc
ctcctaaattttctggagccacagcagttcccctcagagacagccttcctggaagagttt
ggagacctgaagacagaggagcaggtgaagaaactgcagtccatcctgaagcctatgatg
ctgcgacggctgaaggatgatgtagagaagaatctggcccccaagcaggagaccatcatt
gaggtggagctgaccaatatccagaagaaatattaccgggctatcctggagaagaatttc
tccttcctctccaagggtgccaaccagcacaatatgcccaacctcatcaataccatgatg
gagctgcgcaagtgctgcaatcacccatacctcatcaacggggcagaggagaagatcctg
gaagacttccgtaaaacgcactgcccagaggcaccagacttccagctgcaagcaatgatc
caggcagctgggaagctggttctcattgataagctgcttcccaagctgattgctggtggg
cacaaggtgctcatcttctcgcagatggtgcgctgccttgacatcctggaagactatctc
atccagagacggtacacctatgagcgcatcgacgggcgggtgcgcggcaacctgcgccag
gctgccatcgaccgcttctgcaagcccgactcggatcgctttgtctttctgctgtgcaca
cgggcaggcgggctgggcatcaacctgaccgctgccgacacctgcatcatctttgattct
gactggaacccacagaatgacctgcaggctcaagctcgctgccaccggatcgggcaaagc
aaggccgttaaggtctatcgcctcatcaccaggaactcctatgagcgggagatgttcgac
aaggccagcctgaagctgggcctggataaagctgtgctgcaggacatcaatcgcaagggc
agcaccaatggggttcaacagctctccaagatggaggtggaggacctgctgcggaagggt
gcctacggcgcactcatggatgaggaggacgaagggtcaaagttctgtgaggaagacatt
gatcagatcctccagcgcaggacacagaccatcacgatccagtctgaagggaagggctcc
acatttgcaaaggccagctttgtagcatcaggaaacagaactgacatttccttagatgac
cccaacttctggcagaagtgggccaagatagcagagctcgatacagatgccaagaatgaa
aaggagagcctggtcatcgacagaccccgggtgcggaagcaaaccaaacactacaactcc
ttcgaggaggatgagctgatggagttctctgagctggacagtgactcggatgagcgaccc
acacgctcgcgccgctttaacgagaagacgcggcgatacctgcgggctgagtgcttccgt
gtggagaagaacctgctcatatttggctggggacgctggaaagatatcctgacccatggg
cggttcaagtggcacctgaatgagaaggacatggagatgatttgtcgggccttgctggtg
tattgtgtcaagcactacaagggggatgagaagattaagagttttatctgggatctcatc
acaccaacgaaggacggccagaatcaggctctgcagaatcactcaggcttgtcagcacca
gtgcccagaggcaggaaggggaagaagacaaagaaccagatgctgcttcctgagataaag
aacgcagactggcttgccacctgcaaccccgaggtggtgctccatgatgacagctacaag
aagcacctcaaacaacactgcaacaaggttctgctgcgagtgcgaatgctctactacctg
aaggctgaagtgctgggggaggctgcggataaagcctttgaggggacccctgccagggag
ctggatgtgctgctgccagacattgactacgtggagatcccagtagactggtggaatgct
gaagccgataaatccctgctcatcggcgtcttcaagcacggttacgagcggtacaacgcc
atgcgggcggacccagcgctgtgtttcctggagaaggtgggcatgcctgatgagaagctg
ctctctgccgagcagggcgtcagcgatggggcacaggatgctgctgaaaggggcagcgtg
gaaaaagaagagggcagtggagaaaagctggaggggctgtcaaaacaggaggacattgtg
gctgttggggagggtgaagccagtgagaagcgggacgagccagcggcagcccaggatggc
tctgactcagacagatcctgctggcctgtctcctctgctctcacggccagactgcgccga
ctcgtcaccgtctaccagcgctgcaaccgcaaggagctgcctccccgcaccgagatgctg
gtgcctggtaaccatggctactggctgcaggatgagatgttccggagagcctcggagatg
gactcagtgaacaaagaaatgcagaaaaggtggaccaggagggagcaggcggatttctac
cgtactgtctcctcctttggggttatctatgaccaagagaaaaaaatctttgactgggcc
cagttccgagccatctctagactggagaagaagacggatgagagcctggagaagtacttc
tacagctttgtggccatgtgcaagaatgtctgtggtctccctttgtggaaagaggatggt
cctccagaccctgacatctacgtggagcccatcacagaggagcgtgctgccaggaccctg
taccgcattgagctgctgcggaaggtgcgcgagcaggtgctcaagtgcccgcagctccac
gagcgcctcaagctgtgccggcccagcctctacctgcccgtgtggtgggagtgtggcaaa
cacgaccgggacctgctgatcggcaccgccaagcacggcctgaaccgcactgactactac
atcatgaacgacccccagctgtctttcttagacgcgtacagaaactatgcccagcataaa
agaacggggctcccaggcccagaaaccttgtgctgcctttaccagtctaactccaaactc
tacggttcccccgtgtacggccggctggaccagacctgtgaaaccctggagaacgaagct
gagagtcacatcaagctagaaaccatggacagcaccatgtcccaggctgggggcagcccg
ctggacacgaactgtgaaacattcatgtccgaagtccgggacatcatctccagtaactac
gatgagagctcgctgccggactcactggtgtgcatgatgtacgatgagaaggcctgtccc
agcgagcagagctcccttgccagggacagcccaagctgcgcagatgttggaagcagcgtt
gccaaactctccgagagcaagctggagggggatgaggatccatccagctgtgatgcagat
gccatgagggaggctcccttcctagagggtttgcaggtgggctctgaccgaatggatgat
gaggaagctgagccttcaccttctactcctgagagcaatccttcacagagtgccccagcc
gagctcggcaaaggcttggaacagaaaggagcacttgccagcccagcagcgggactgcct
gagcacggcgccgtggaaagagtcctaagtgtggggctctacagtcccagtctccataac
tatgaactgaaggttcctcctgagcagaggttcatcagtctgctgcaggagaaaggattg
gaggcaaagtcaggaccaagtcagagccacagcgaggaagatgaggaggaagaagaggat
gatgataactctgaggcagcagcagatgccgtggaaagcttgaatggtccccggattggg
gctgattgtgaccctgaggctcataaactggggggtgaggagcagagctctgttctcccc
acacctaatgccacttgcccagaagacataaatggcaagagggagtccctggggctgggg
gagcccggggcagagggcagggaggactgtggcttgaacgaggagagcacccagcagcac
tcaccgggccaggctcagagccagcccttcagcctgcctacacctctgcctcagggaggg
cctcagggggcagaagcgccctgtgtcagggggaagcccttgggccgagatgctgagggg
cagacaggctgcacagaggctgcgcaccctgagcctcagggtataaagcaagaagagtgt
gagaacagagatgacggggagaaagccagcagcaaccagagccaagatggtacagagaag
tactcggaggaagagaacaagaattctgcttctgtcctacccggggagattgatgatctt
caggatacccgggcaccgaccattgcccagctgctgcaggagaagacactttactccttc
tctgagtggcccaaggaccgtgtcatcatcagccgcatcgacaacatctgccacgccatc
ctgaagggcaagtggccttcctccagccagcagtttgaggcacagagcttgctgacagcc
ccagccatggccagcaacaccagcagcaggagcagttttactgagtcagaagcccccgat
cccaacttcagtaatggggtcttaatgtcacgggtacaaaaggaaggtttcctgagccct
gcctttgcaaaagatgagcggaagcacaggagaccctatgaatttgagatggagagagat
gtcaaacagaggagcctggagcagctggcagcagcccacgtccatccgcccattgtgctg
aacggctggcgcgaggcagcagtggacttgtccagagcctctgatggctccctggggagc
tcctctcctttccccctgaacgcaaacatgcccaaactggggaccgtgaatgccctccag
agctccctgggcatggacttgtctggcatcctccaggcagggttaatccatcctgtcact
ggacagattgtaaacggcagcctccgaagagatgatgctgccatgaggaggagacggggc
aggaggaaaaatgtcgaagggatggacctcatcttcttgaaggagaggcctcttccaaac
aggctgcaggaattgtctaaggaagatgaggaagacaagatcctactgcaccctttctcc
ttccgtcctgggatccactcaaagaatggagcaagaccagtgcccctagaccactttagg
agtgatctgaggggaagttggtcttcctggtgttcaaagtgtttccttgatgttcaggaa
gaccagccacagccccctcagaacagtcccctccctgatgggccggttgctgcttcctca
gctccacagccagtcccagctgcaggccaagagaaggctgtcccaaataagagtctcctt
gactggctccggcagcagtctgactacacactcgatgttcccagctttggcacaaatttt
tcagacaaacccaagcagaggaggcagcgctgcaaggaccccaacaaactggacattagc
tctctgacgggagaggagcgggtgccggtggtacataagggtaccggacggcggttaggg
ggagccacggcaccagcattgaaggaattgccaaggtggcttgatgcaaacttggagtat
gctgttgcagctgactgggctgacattgttaagctttcaggctacttacccgaaaacaaa
ttcaatcgcatcctcaccgagcctgtgctccgagacaccgggccacgccggagagggagg
aggccccggagtgaactccttaaagggcctggtgtcgtagcagattcttcttctggaatg
ggaccattgttcatgaacggactaattgctgggatggatctagtgggacttcagaacatg
agaaatatgcaagggatccctctgactgggctggtcgggtttcctgctggctttgcagca
gtgcccgctggtgaggatgtgaagagcaccctgagcatgttacccatgatgctgccaggc
atggcgaccgtaccccagatgtttggtgtgggaggactcctcaactccccgatgacgacg
acttgcaccgcgaccgctccgacttcgttaactagcacaacgaaaggtggcacagccggc
gccgaaaaagccaatgaggagaaacagggcagccaggatgggaaaaaagaacctctcgct
gaagataagcccggtcctagttcattttctaatcagacagaatctgcaataactaccagt
agtcctgtagcttttaacccatttcttatcccagggatgtctcctggactgatctatccc
tccatgttcctttcccctggcatcggcatggcgctgcctggcatccagcaaaccaggcac
tcagaggcagcaaacctggagacccagaagcggaagaggaagaaagtgaaaggggaattg
gcaaacccagagccagaaactgtctcactgccagaaaaagaagctgcgaacagtcaaaac
tgtgtggagcagagcctgccagcggtggcagagaaggagcaggacggaccagcagaggag
gagcgccaagcagctcacgataccgattag
DBGET
integrated database retrieval system
