Hirundo rustica (Barn swallow): 120760339
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Entry
120760339 CDS
T09369
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120760339 (SBNO1)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120760339 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
120760339
NCBI-ProteinID:
XP_039936357
LinkDB
All DBs
Position
17:2339778..2368758
Genome browser
AA seq
1391 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDSPDVVLANPAPTPAVQQSVPLSALELGLETEAA
AAVKQEPETVSTPALLNVRQPPSTTTFVLNQINQLPTLGTTIVVTKTTPVTTSRQTITVA
KIIQTSTTTRPSVAAPAVRNALTTAPSKDQIQLKDLLKNNSLNELMKLKPPPNIAQPVAT
AATDLSNGAVKKEASTKEVARIWINDIKMRSFSPTVKVPAVKEEEEPEEEDEEEMGHAET
YAEYMPIKLKIGLRHPDPVVETSSLSSVTPPDVWYQTSISEETIDSGWLSALQLEAITYA
AQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAER
DLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQL
LHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASE
PRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGV
TFKIDEVLLSQEYVKMYNKSVKLWVSARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFF
KYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVF
QSLIEKHFPAPDRKKLFSLLGIDLTAQSNNNSPRDSPCKENKVKKRKGEEISREAKKARK
TGGLAGSSSDESESESDASDNEESDNESSKFLSSGDDDDFNPFRDESSEDDEDDPWLIRK
EHKKNKEKKKKKSIDPDSIQSALLASGLGSKRPSCFTSTVGTTTSSTNTSANSNTNSSFV
TSQDAVERAQQMKKELLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDD
GSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVH
MTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHG
DRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDFPGDFFKDVRQGLIGV
GLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFSDTLNAVIQNAKKNGRY
DMGILDLGSGDEKVRKADVKKFLTPGYSTSGHVELYTISVERGMSWDEATKMWAEQTGPD
DGFYLSLQIRNNKKTAILVKEVNPKKKLFLIYRPNTGKQLKLETCADLKKKYKKVPSEDA
LPHWLEQYNSSADTCTHAYWRGNCKKAGLGLVCEVGLRCRTYYVLCGSVLSVWTKVEGVL
ASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQQQIWQQH
HPQSITNLNNA
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccaggacaagatctgttgcttgctgctttgagtgagagtggaatcagtcca
aatgatctctttgatattgattctccagatgtggttcttgcaaacccagcaccaactcca
gctgttcagcagtcagtaccgcttagtgcattagaactgggcctggagactgaggctgca
gctgctgtgaaacaagagccagagactgtgtctactccagccttattaaatgttcggcaa
ccaccatccaccacaacctttgtgctgaatcaaatcaatcagcttccaactctggggacg
acaatagtggtgacaaaaacgacgcccgtcaccacctcgaggcagacgatcactgtagca
aagatcatccagaccagcacaaccactcggccctcggtggcagcaccagcagttcgcaat
gccttgaccactgcaccttccaaggaccagattcagctgaaagatctgctcaagaacaac
agtcttaatgaactcatgaaattgaagccacctcctaatattgcccaaccggtagcaaca
gcagcgactgacctaagcaatggtgcggtgaagaaggaggcttccacgaaggaggtggca
agaatatggataaatgacattaaaatgaggagtttttcacctactgtgaaagtgccagca
gtaaaagaagaggaggaacctgaggaagaagatgaagaagaaatgggccatgcagagacc
tatgctgaatatatgccaataaaattaaaaattggtctacgtcatcctgacccagtagtg
gaaaccagctcgttatccagtgtgactcctcctgatgtgtggtaccagacatcgatatca
gaggaaacaattgacagtggctggttgtcagctttgcagctcgaagctatcacttatgca
gcccagcaacatgaaacattcctgcccaatggagacagagctggattcttgataggtgat
ggtgctggtgtaggaaaaggaaggaccatagctggaataatctatgaaaattacttgtta
ggcagaaaaagagcagtctggtttagcgtgtcaaacgatctgaaatacgatgctgaaaga
gatttgagagatattggagcaaaaaacatattggtgcattcattaaacaagttcaagtat
gggaagatttcttccaaacataatggaagtgtgaagaaaggtgtcatctttgctacctat
tcttctctcattggagaaagtcagtctggtggtaaatacaaaaccagattaaagcaactt
cttcactggtgtggtgaagactttgatggagttatcgtatttgatgagtgtcataaagca
aagaatctgtgtcctgttggttcttcaaaaccaacaaaaacaggtctggctgtattggaa
cttcaaaataaacttccaaaagccagggttgtttatgccagtgccacaggtgcatctgag
ccaagaaacatggcctacatgaaccgccttggaatatggggtgaaggaactccatttagg
gaattcagtgactttattcaggctgttgaaagaagaggtgttggtgccatggaaatagtt
gctatggatatgaagctgagaggaatgtacatagccagacagttgagtttttcaggtgta
actttcaaaatcgacgaagttctgctctcacaggaatatgttaaaatgtacaataaatct
gtgaaactgtgggtcagtgctcgagagaggtttcagcaagcggccgatctcatcgatgca
gagcagcgcatgaaaaaatccatgtggggtcagttctggtcagctcatcaaaggttcttc
aagtacctttgcatagcctctaaggtgaagagagtggtgcagctggcccgggaagaaatc
aagaatggcaaatgcgttgtcattggcctgcagtcgacaggagaagcaagaacattggaa
gctttggaggaaggtggtggggagctcaatgactttgtttctacagcaaaaggagtattc
cagtctcttattgaaaagcactttccagctcccgacaggaagaagctgtttagcttgttg
ggaattgacctgactgctcaaagtaataacaattcaccccgagacagcccttgcaaggag
aacaaagtaaagaaacgaaaaggtgaagaaataagcagagaagccaaaaaagctcgcaaa
acaggtggtcttgcagggagcagctctgatgagagcgaaagtgagtctgatgcttcagac
aatgaagaaagtgacaatgagagctccaaatttttgagttctggagatgatgatgacttc
aacccgttcagagatgaatccagtgaggatgatgaagatgatccctggctgattagaaaa
gagcataaaaaaaataaagaaaagaaaaagaagaaaagcatagacccagattctattcaa
agtgccttactagcctctggtctgggatccaaacgacccagctgtttcacttccactgtt
ggaaccaccacttctagtaccaacacgtctgcaaacagtaacacaaacagcagctttgta
acgagtcaggatgctgttgaaagggcccaacaaatgaaaaaagaactgctggataaactg
gaaaagctggctgaagatcttccacctaatacactggatgagcttatagatgaactgggt
ggtcctgaaaatgttgcagagatgacaggccgcaaagggagagtggtgagcaatgacgat
ggcagcatctcctacgagtcaaggtctgagctcgacgtgcccgttgaaatcctgaacatc
acagaaaagcagcggttcatggatggagataagaacattgccatcatctcagaggctgcc
agctctggtatctcactgcaagcagaccgcagggccaagaaccagcggcggagggttcac
atgaccctggagctgccctggagcgcggatagagccatccagcagttcggaagaactcat
agatccaaccaagtgactgctccagagtatgtgttcctcatttctgaactggcaggagag
caaagatttgcatctatagttgcaaaaagactggagagtttgggagcgctcacccacggg
gacagacgggccacagaaactcgagacctcagcagattcaattttgacaacaagtatggc
agaaatgctctggagattgttatgaagtccattgtgaacttggactccccaatggtctca
cctccccctgattttcctggagacttcttcaaagatgttcgtcagggattgattggcgtg
ggcttgataaatgtagaagacagatctggaatcctgacacttgataaagattacaataat
ataggaaaatttctgaatcgaattcttggcatggaagtccatcagcagaatgctttgttc
cagtacttctctgacacgttaaatgcagttattcaaaatgctaaaaagaatggaagatac
gacatgggcatcttagatctgggctctggggatgagaaagtgaggaaggcagatgttaag
aagtttttaactcctggatattctacctctggacacgtagagctgtacacaatcagtgtg
gagagaggaatgtcttgggatgaagcaacgaagatgtgggcagaacagacaggtccagat
gatggattttatttatcactacagataagaaataacaagaaaacggcaattctggtaaaa
gaagtgaatcctaaaaagaagctttttttgatatacagaccaaatactgggaaacaactc
aaactagaaacctgtgcagacctgaaaaagaaatataagaaggtaccttctgaggatgct
ctgccgcactggctggagcagtacaactcctctgcagacacctgcacccacgcctactgg
agaggcaactgcaagaaggcaggcctggggctggtctgtgaggtggggctgcgctgcaga
acctactacgtgctgtgtggctccgtgctgagcgtgtggacaaaggtggaaggagtcctg
gcctccgtcagtggcacgaatgtgaagatgcaaatcgttcgcctgaggacagaggatggg
cagaggatcgtaggtttgatcattcccgcgaattgcgtgtcgcccctggtgaacctcctg
tccacgtccgaccagtcgcagcagctggcagtgcagcagcagcagatctggcagcagcac
cacccccagagcatcaccaacctcaacaacgcgtga
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