Hirundo rustica (Barn swallow): 120760349
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Entry
120760349 CDS
T09369
Symbol
MED13L
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120760349 (MED13L)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
120760349 (MED13L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
120760349
NCBI-ProteinID:
XP_039936373
LinkDB
All DBs
Position
17:8778447..8947243
Genome browser
AA seq
2216 aa
AA seq
DB search
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFEGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVDVIHRELHMVEEGFWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFIRPYDKDEKPVNKSEHLSCAFTFFLHGESNVCTS
VEIAQHQPIYLITEEHIQMAQSSPSPFQVLVSPYGLNGTLTGQSYKMSDPATRKLMEEWQ
YFYPMVLKKKEGMKEEEELGYDNDFPVAVEVIVGGVRMVYPSAFVLISQSDIPVSQSAAS
AAGHINVGQQGLGSVKDPASTCGMPLTPPTSPEQAVMGESGCSQSSISHPAVQEGTVSVH
SPKKSSKITPKFHNRIVHRVWKECILNRAQSKRNQITAANLEEEVPNNSVSWDFVDPVQR
VSCSCSRHKVFKQRCAGASGRPPTLPQPGFAVGPAAASALPPPASSKHKTTERQDKGEKL
QKRPLMPFHHRPSVTEELCMEQDTSGQKLGLAGMESALEVPNSRKYEKPLSLPARNPSKQ
INMNPMDSPRSPTSPLPPTLSPQPRGQEAENLDPPSVPVNPALYSSGLELQPLPSLDDRT
VLVGQRLPLMAEVSETALYCGITQSNEAVDVWRTYSVPSSDDPEFRPPELPCERYDGRME
INPDSTALKRLLAQPNKRFKILEEQKPVQTLNYLDPLPLLQPPGEGWGDTSDPYTFEDGD
IKYSFTVNKKCKLGAEKDPLKKNKSEDGIGSKEIPPAGHSTPVPDGKDAMSIFSSAPKTE
PRQDGAAARAGSGSLTQVTDLAPSLHDLDNIFDNSDEDELGAVSPALRSKVPAAGSEERP
LGKDGRTAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMSYKDGINSETVTALGMMESPMV
NVVPTQLAEFKMEVEDGLGSPKPEEIKDFSYVHKVPSFQPFVGSSLFAPLKILPSQCLLP
LKIPDACIFRPSWAVPPKIEQLPLPPAATFIRDGYNNVPSVGSLADQDYLQMNTPQMSTP
VTLNSAAPASNSAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSP
ASTPSTTRPLNSVEPGTVQPIPEAHSLYVTLILSDSVLNIFKDRNFDSCCICACNMNIKG
ADVGLYIPDSSNEDQYRCTCGFSAIMNRKLGYNSGLFIEDELDIFGKTSDIGQAAERRLM
ICQSNLISQMGDGARRSQEPPMSLLLLLQNQHTQPFTSLSCLDYMASNNRQTLPCVNLSY
DRLQADSNDSWVECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHSNVLDISMLSSQ
DVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPLP
IPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLDGAKTFFRDL
SAVYEMCRLGQHKPICKVLRDGIMRVGKSVAQKLTDELVSEWFSQPWGSEDCDNHSRLKL
YAQVCRHHLAPYLATLQLDSSLLLPPKYQTPAPSQPQAAPGSSGPAPSGSSSCLSAAAGA
PATGSSFSSTPSAGTTSLAAGSASSSGSSVPQLSASSATPGASQMGASSTPGFSGNAGSG
QGSGAAGGTAERPQGSAGPGADTEPGPSLPQQQQEGQEGTSERERIGIPTEPDAADSNAY
PPAVVIYMVDPFTYTADEESASTNFWLLSLMRCYTEMLDNLPENMRNSFILQIVPCQYML
QTMKDEQVFYIQHLKSLAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPI
QLYSPPFILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLET
CIVNIDLPSRSRRSKLSARKIGLQKLWEWCIGIVQMTSLPWRVVIGRLGRLGHGELKDWS
ILLGECSLQTISKQLKEVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFG
RSTALNLQSSQLNTPQDASCTHILVFPTSATIQVAPANYPNEDGFSPTNDDMFDLPFPDD
MDNDIRILITGNLHSSPNSSPVPSPGSPSGTGVGSHYHHSRSQGERLLSREAPEELKQQP
LALGYFVSTAKAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQTDELLPARNSQRVP
HPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRSSCLPVHFVVLTQLYNAIMNIL
NT seq
6651 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggcggcgaactgggtggcgaacggggccagcctggaggactgtcactccaac
ctcttctcgctggctgaacttacgggcatcaaatggcgtaggtacaactttgaaggccat
ggggactgtgggcccatcatttcagctccggcccaggatgatcccatcctgctgagcttc
atccgctgcctgcaggccaacctgctgtgcgtgtggcgccgcgacgtcaaacccgactgc
aaggagctctggatattctggtggggggacgagcccaacctggtcgatgtcatccaccgc
gagctgcacatggtggaagaaggattctgggagaatggactttcctatgagtgtaggacc
ctgctcttcaaagcaattcataatcttctggaaagatgcctgatggataagaacttcgta
agaattgggaaatggttcattcggccctatgataaggatgagaagcctgttaataaaagc
gagcacttgtcgtgtgccttcacgttcttcctgcacggggagagcaatgtgtgcacgagt
gtggagatcgcccagcaccagcccatctacctgatcaccgaggagcacatccagatggct
cagtcctccccctcgcccttccaagtgctggtgagtccttacggcttgaacgggaccctc
acgggccagtcctacaagatgtcagaccccgccactcggaagctgatggaggagtggcag
tacttctaccccatggtgctgaagaaaaaggaaggcatgaaagaggaggaagagctggga
tatgacaacgatttccctgtggccgttgaagtcattgttgggggtgtgaggatggtgtat
ccttcagcctttgttctcatctcccagagtgacatcccagtgtcacagagcgctgccagt
gctgcaggccatataaatgtgggacagcaggggcttggaagcgtgaaggatcctgccagt
acctgtgggatgcccctgacgccccccacctctccagagcaggctgttatgggagaaagt
ggctgctctcagagcagcatcagccatccagctgtgcaggaggggacagtcagtgtccac
agtccaaagaaatcaagcaagattactcccaaatttcacaaccgtattgttcaccgtgtg
tggaaggagtgcatcctcaacagggcacagtccaagaggaatcaaattacagctgcaaat
ttggaagaggaagttcctaacaatagtgtttcatgggattttgtggatcctgtccaaaga
gtcagttgttcttgttccaggcacaaggtgttcaagcagcgctgcgctggtgcctcgggc
cggccccccacgctgccccagcccggcttcgcagtggggccggcggcggcctcggcactg
cctcctcctgcctcctcaaagcacaaaaccaccgagaggcaggacaagggagagaaactg
caaaaaaggcccctgatgccgtttcaccatcggccctctgtgactgaagagctatgcatg
gagcaggacacgtccgggcagaagctgggactggccgggatggagtccgccttggaagtt
ccgaattccaggaaatacgagaagccgctctcgctgcctgctagaaatccaagcaagcag
attaatatgaatcctatggattcaccccgttcccccacttcccctctgcctcccaccctg
agcccccagcccagaggtcaggaggcggagaacctggacccgccctccgttcctgtgaac
ccagcgctctacagcagcgggctggagctgcagccgctgcccagcctggatgacaggaca
gtcctggtgggacagaggttacctctgatggcagaggtcagtgagacagccttgtactgt
ggcataactcagagcaacgaggccgtggacgtgtggaggacctacagtgtcccttcgagt
gacgaccccgagttccggccgccggagctgccgtgtgagaggtatgatggcaggatggag
atcaaccccgacagcactgcactgaaaaggctcttagcacaacctaataaacggtttaaa
attttggaagagcagaaaccagtgcagaccctgaactatctcgaccccttgcctctacta
caaccccctggagaaggctggggagacaccagtgatccttacacctttgaagatggagac
atcaagtacagtttcactgtcaataaaaaatgcaaacttggggctgagaaagatcctttg
aaaaagaacaagtcagaagatgggattggttccaaggaaatccccccagcgggccattcc
acaccagttcctgatggaaaagatgccatgtccattttcagttctgctcctaagaccgag
ccgcggcaggacggcgctgccgccagggccggctctggcagcctcacccaggtcaccgac
ctggccccgtccctgcacgacctcgacaacatcttcgacaactccgacgaggatgagctt
ggggccgtgtccccagccctgcgctccaaggtgccggcagcgggctccgaggagcggccg
ctgggcaaggacggccggactgcggttccctaccctcccactgtggcagatctccaaagg
atgttcccaacaccaccctctttagaacagcaccctgccttttccccagtgatgagttac
aaagacggaataaattcagagactgtgactgccttgggaatgatggagagtcctatggtc
aacgtggttccaacgcagctggctgagtttaaaatggaggtggaagatggattaggtagc
cctaaacctgaagaaattaaggatttttcgtatgtgcacaaagttccatcatttcaacct
ttcgtgggctcctccctgtttgctccactgaagatcctgcccagccagtgcctcctacct
ctgaagattccagatgcctgcatcttcaggccttcttgggccgttcctccgaaaattgag
caacttccattgccacctgcagccactttcatcagagatggctacaacaacgtgcccagc
gtgggcagcctggcggaccaggactacctgcagatgaacacgccgcagatgagcacgccc
gtgacgctcaacagcgcggcccccgccagcaacagcgcgggggtgctgccgtccccggcc
acgccgcgcttctccgtgcccacgccgcgcacgccgcgcacgcccaggactccccggggc
gggggcaccgccagcggccagggctccgtcaagtacgacagcacggaccagggctccccc
gcctccacgccctccaccacgcggccgctcaactcggtggagccgggcacggtgcagccc
atcccggaggcgcacagcctgtacgtgaccctgatcctctccgactccgtgctcaacatc
ttcaaggacaggaacttcgacagctgctgcatctgcgcctgcaacatgaacatcaagggc
gcggacgtggggctgtacatccccgactcctccaacgaggatcagtaccgctgcacgtgc
ggcttcagcgccatcatgaaccgcaagctcggctacaactccgggctcttcatcgaggac
gagctggatattttcggcaagacctcggacatcggccaggctgcggaaaggcgactgatg
atctgtcagagtaacttgatctcgcagatgggagacggagccaggaggagccaggagcct
cccatgagcctcctgctgctgctgcagaaccagcacacgcagcccttcacctcgctgagc
tgcctggattacatggcctccaacaaccgccagacgctgccctgtgtcaacttgagctac
gaccggctgcaggccgacagcaacgactcctgggtggaatgtttcaacgccctggagcag
ggcaggcagtacgtggacaaccccaccgggggcaaggtggacgaagcccttgtccgaagt
gccactgtccattcctggcctcacagcaacgtgctggacatcagcatgctctcctcccag
gatgtggtgcgcatgctgctctccctgcagccctttctccaggatgccatccagaagaag
aggacgggaaggacctgggagaacatccagcacgtgcagggaccactcacctggcagcag
ttccataagatggcaggacgggggacctatggctctgaggaatctcccgagcctctcccg
atcccgacgctgctggtgggctatgacaaggacttcctgacaatctctccgttctccctg
cccttctgggagaggctcctgctggatccctacgggggccatcgggatgtcgcctacatc
gtggtgtgtccggaaaatgaggccttgctcgatggagccaaaactttcttcagggacttg
agtgctgtatacgagatgtgcagacttgggcagcacaagcccatctgcaaagtgctgcgg
gacgggatcatgcgggtgggcaagagcgtggcgcagaagctgacggacgagctggtgagc
gagtggttcagccagccctggggctccgaggactgtgacaatcattccaggctcaagctc
tacgcgcaggtctgccgccatcaccttgcaccttacttggccaccctgcagctggacagc
agcctcctgctgccccccaagtaccaaacgccggctccgagccagccgcaggcagctccc
gggagctcgggccccgctccctccggctcctcctcgtgtctctcggctgccgccggggcc
ccagccacgggcagctccttcagctccacgcccagcgcgggcaccacgagcctggcggcc
gggagtgcctcctcctcgggctcctcggtgccacagctgtcggcgtcctccgccacgccc
ggcgccagccagatgggcgcctcctccacgccgggcttcagcggcaacgcgggctcgggg
cagggcagcggcgccgcgggaggcacggccgagcggccgcagggcagcgccggccccggg
gcagacaccgagcccggccccagcctaccgcagcagcagcaagagggacaggaaggcacg
tcggagcgggagcggatcgggatccccacggagccggacgctgcggacagcaacgcctac
ccccccgccgtggtcatctacatggtggatcccttcacctacactgccgacgaggagtct
gcctccaccaacttctggctcctgagcctcatgagatgctacacagaaatgctggacaac
ttgcctgagaatatgaggaattctttcattctccagattgtgccttgccagtacatgctg
cagacaatgaaggatgagcaggttttctacattcagcacttgaagtctctggcattctct
gtgtactgccagtgcaggaggcccctgcccacacagatccacatcaagtccctcacaggc
tttgggccagctgccagcattgagatgaccctcaaaaatcctgagaggcccagcccaatc
cagctgtactcacctcctttcatcctggcccccatcaaagacaagcagacagagctggga
gagacgtttggagaggccagtcagaaatacaacgtgctctttgtggggtactgcctgtcc
catgaccagcgctggctcctggcgtcctgcacagacctgcacggggagctgctggagacc
tgcattgtcaacatcgacctgcccagcaggtcaaggaggagcaagttgtctgcccggaag
atcgggctgcagaagctctgggagtggtgcatcggcattgtccagatgacatccctgccc
tggagagttgtcatcgggcgcctgggccgcctgggccacggggagctgaaagactggagt
atcctgctcggggagtgctccctgcagacaatcagcaaacagctgaaggaggtttgccgc
atgtgtggcatctccgcagcagattccccctccatcctcagtgcctgcctcgttgccatg
gagccacagggatcattcgtggtgatgccagacgcggtgacgatgggctcggtgttcggg
cgcagcacggcgctgaacctgcagtcgtcccagctcaacaccccccaggacgcctcctgc
acgcacatcctggtgttccccacctctgccaccatccaggtggcacctgcaaattacccc
aacgaggatggcttcagccccaccaacgatgacatgtttgacctcccgttcccagatgac
atggacaatgacattagaattttgataacagggaatcttcactcttcaccaaattcctcc
ccagttccttcccctggatcaccatctggcactggagtgggatctcactaccatcacagt
aggagccaaggtgaacgcctcctctccagggaagcccccgaggagctgaagcagcagcct
ctggctctgggatactttgtgtcgactgccaaagccgagaacctcccgcagtggttctgg
tcctcctgtcctcaggcgcagaaccagtgtcccctcttcctgaaggcctctctccatcac
cacatctctgtagcgcagacggacgagcttctacctgccagaaattctcagcgagttcct
caccccctcgactctaaaactacatcagatgtcttgaggttcgtgctggagcagtacaac
gccctgtcctggctcacgtgtaacccggccacgcaggaccgcagctcctgcctgcccgtg
cacttcgtggtgctcacccagctctacaacgccatcatgaacatcctgtag
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