Hirundo rustica (Barn swallow): 120760484
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Entry
120760484 CDS
T09369
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120760484 (TFIP11)
Spliceosome [BR:
hrt03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120760484 (TFIP11)
Other components
Complex C specific factors
120760484 (TFIP11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
120760484
NCBI-ProteinID:
XP_039936791
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All DBs
Position
17:complement(4741774..4751779)
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AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGDDGVEMESFEVSDWDLQNEFNPHRQRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVSFVSAGLRKAAAEELSDEDSDDDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGSKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTPQSLQDFPVVDSEEETEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRISKQLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMAEVLSHEEKAI
SNLSKVLDMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKEYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHSGQDLSTDAFHRLMWEIWMPYVR
NIVARWQPRNCGSMVDFLDSWVNVVPVWILDNILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAAGSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacggcacggacggggacgatggcgtggagatggagagcttc
gaggtgtcggactgggacctgcagaacgaattcaacccgcaccggcagcggcaccgccag
accaaggaggaggccacctacggcgtgtgggccgagcgcgactcggacgaggagcggccc
agcttcggcgggaagcgctccagggattactcggcccccgtgagctttgtcagtgctggg
ctgaggaaggcggcggccgaggagctctccgatgaggactcggatgacgatgagaagcct
gtgaagcaggaggagattcccaaggagtttgtgcccaagaagttaaaaactggtggaaat
ttcaagcccagccagaaaggcttcgtagggggctccaagtcctttgtggattttggcagc
tgggagagacacactaaaggaattgggcagaagcttctccagaagatgggatatgtccct
ggaaggggtctggggaagaatgctcaaggaatcatcaatcccatcgaggccaagcagagg
aaaggcaaaggtgctgtgggcgcttacggctccgagaggaccccgcagtccttgcaggac
ttccctgtggtggactcagaagaggaaactgaggaggaatttcagaaggagctcagccag
tggcggaaggacccgaacggaggcaagaaaaagcccaagtacagctacaagacagtggaa
gagctgaaagccaagggcaggatcagcaaacagcttgcagcccctcagaaggagctgtcc
caggtcaaggtgattgacatgacgggccgggagcagaaggtttattacagctacagccag
atcagccacaagcacaacatcccggacgacagcccccagcagcccctgggcaaggactcc
aagccccagggctttgccctgcccgagctggagcacaacctgcagctgctcatcgacatc
acggagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtggtc
aacctgagccacgagatccagaagatggctgaggtgctctcccacgaggagaaggccatc
agcaacctcagcaaggtgctggacatggtggaggagtgcgagaggaggatgcagccgggc
tgtgagaaccctctgaccctggatgagtgtgcaaagatctttgagaccctgcaggacaag
tactacgaggagtacaggatgtcggacagggtggacctggcagtggccatagtttatcct
ctcatgaaggaatacttcaagaactgggatcccctcaaggactgtacatatggcacggag
atcatagccaagtggaaaagcctcctggaaaacgatcagctgttatcccacagtgggcag
gacctgtcaacagatgcttttcacagactgatgtgggagatctggatgccatacgtcaga
aacatcgtggcgcggtggcagccgaggaactgtggatccatggtggatttcttggatagc
tgggtgaacgttgttcctgtgtggatactggataacattctggatcagctcatcttcccc
aagctgcagaaggaggtggagagctggaaccctctgacggacacggtgccgatccactcg
tggatccacccctggctgccgctgatgcaggcgcggctggagccgctgtactcgcccatc
cgcaacaagctggccaacgccctgcagaagtggcaccccagcgactcctctgccaagctc
atccttcagccctggaaggatgtgttcactcctggctcgtgggaggctttcatggtcaag
aacatcgtgcctaaactcggaatgtgtctgaatgagctcatcatcaaccctcaccagcag
cacatggatgccttttactgggtgatcgactgggaggggatgatttctgtctccagcctc
gtggggctgctggagaaacatttcttcccaaagtggctgcaggtgctctgctcttggctc
agtaacagccccaactacgaagagatcaccaagtggtacctgggctggaagtccatgttc
tcagaccaggtgctggcacatccctccatcaaagacaagttcaatgaagcccttgacatc
atgaaccgggccgtgtcctccagcgtgggtgggtacatgcagccgggcgcccgggagaac
atcgcgtacctgacgcacacggagcggcgcaaggacttccagtacgaggccatgcaggag
cggcgcgaggccgagaacatggcccagcgcggcatcggcgccgccgccggctccgtgccc
atgaacttcaaggacctcatccagaccaaggccgaggagcacaacatcgtcttcatgccc
gtcatcggcaagcggcacgagggcaagcagctctacaccttcggcaggatcgtcatctac
atcgacaggggcgtggtgttcgtgcaaggggagaagacctgggtgcccacctcgctgcag
agcctcatcgacatggccaagtga
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