Hirundo rustica (Barn swallow): 120760545
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Entry
120760545 CDS
T09369
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120760545 (USP30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120760545 (USP30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120760545 (USP30)
04121 Ubiquitin system [BR:
hrt04121
]
120760545 (USP30)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120760545 (USP30)
Peptidases and inhibitors [BR:
hrt01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120760545 (USP30)
Membrane trafficking [BR:
hrt04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
120760545 (USP30)
Ubiquitin system [BR:
hrt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120760545 (USP30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
120760545
NCBI-ProteinID:
XP_039936896
LinkDB
All DBs
Position
17:4092812..4103194
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AA seq
476 aa
AA seq
DB search
MRSWGLLGGAAAALAAGIYVLWGPITGRKRRRRGLVPGLLNLGNTCFMNSLLQGLSSCPS
FIRWLEEFTAQYRTEQEKSQEHHQCLSVTLLQLLRALSCQEVTEDDVLDASCLLDVLRMN
RWQISSFEEQDAHELFHVLTSSLEDERDRQPRVTHLFDVHSLEQPEITQKHISCRTRGSL
PPVSSPWKSQHPFHGRLTSNMVCKHCEHQSPVRFDTFDSLSLSIPAAVWGRPMTLDHCLH
HFISSESVKDVVCDNCTKIQAEGILNGQSIENQRTTFVKQLKLGKLPQCLCIHLQRLSWS
NQGTPLKRHEHVQFNEFLVMDIYKYRVPGPKSSQEQLSQKSSEEKTPGVKDGRAGKPSDA
EPPAGTKPLFMNGASSSSSPSFLMSPGTFPLAAFPECRAPLYLYRLMAVVVHHGDMHSGH
FVTFRRAPGARGSQWLWISDESVRRASLHEVLAASAYLLFYERVHGRAQPQSPAQR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcggagctgggggttgctggggggagcggcggcggcgctggcggccgggatttacgtt
ctgtggggccccatcaccggcaggaaacggcgccggagagggcttgtcccagggctcctg
aaccttggcaacacgtgtttcatgaattccctgctccagggcttgtcctcctgcccctcc
ttcatcaggtggctggaggagttcacggcacagtacaggacagagcaggaaaaatcccag
gaacatcatcaatgcctgtcagtgactttgctgcagctcctgagagctttatcctgccag
gaggtgacagaggacgatgtcctggatgccagctgcctgctggacgtgctgaggatgaac
aggtggcagatctcctcctttgaggagcaggatgcccatgagctgttccatgtcctgacc
tcttccctggaggacgagcgggatcggcagccccgtgtcacccatctcttcgatgtgcat
tccctggagcaaccagaaataacccaaaagcacataagctgcaggacaagaggatctctt
ccccccgtgtccagcccctggaaatctcagcaccctttccacggaaggctgaccagcaac
atggtctgcaaacactgtgagcaccagagccctgtgaggttcgacaccttcgacagcctc
tccctgagcattccagcggctgtgtggggtcgtcccatgacactggaccactgcctccat
cacttcatctcctcagagtctgtgaaggatgttgtgtgtgacaactgcaccaaaatccag
gcagaaggaattctgaatggacagagcatagaaaaccagagaacgacgtttgttaagcag
ttaaagttaggaaagctgccccagtgtttgtgcatccacctgcaaaggctgagctggtca
aaccagggcactcccctgaagagacacgaacacgtccagttcaacgagttcctggtcatg
gacatctacaaatatcgggttcctggtcccaaatccagccaggagcagctcagccagaaa
agctccgaggagaaaacccctggagtaaaggatgggagagcagggaaaccttcagatgca
gagccaccagctggaaccaaacctctcttcatgaatggtgcctcctcttcctcctctccc
tcgtttttaatgtccccaggaactttcccacttgctgcattccccgagtgcagggccccg
ctgtacctgtaccgcctgatggccgtggttgttcaccacggggacatgcactcgggacac
ttcgtcaccttccggcgcgcgccgggcgcccgcggcagccagtggctctggatctcggat
gagtccgtgcgcagggccagcctgcacgaggtgctggctgccagcgcctacctgctgttc
tacgagcgcgtgcacggccgggcccagccccagagcccggcccagcgctga
DBGET
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