Hirundo rustica (Barn swallow): 120760552
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Entry
120760552 CDS
T09369
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrt03009
]
120760552 (DDX55)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120760552 (DDX55)
Ribosome biogenesis [BR:
hrt03009
]
Eukaryotic type
Pre-60S particles
Helicases
120760552 (DDX55)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
SHOCT
AAA_22
Motif
Other DBs
NCBI-GeneID:
120760552
NCBI-ProteinID:
XP_039936904
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Position
17:complement(2280603..2287831)
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AA seq
596 aa
AA seq
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MEAVTEGGWGSLPVPLSPGVLRALRELRFHQMTPVQSATIPLFMSNKDVAAEAVTGSGKT
LAFVVPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLSHFTKHFPMFSQILLIGG
KNPMEDVEKFKEHGGNIIVATPGRLQDLFRRKADGLDLASSVKALDVLVLDEADRLLDMG
FEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASNTQKTPT
RLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMSIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKPQTDVLDLLPKLKSMALADRAVFEK
GMKAFVSYIQAYAKHECNLIFRIKDLDFASLARGFALLKMPKMPELRGKCFPDFTPVTIN
TDTISFKDKNREKQRQKKLEEQRKEREENQGKKKFVKNKAWSKQKAKREKKKKVTAKRKR
EEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKKLTGNQRLKTETAEDVEAEG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgactgagggcggctggggctcgctgccggtgccgctcagcccgggcgtg
ctgcgggcgctgcgggagctccgcttccaccaaatgacgccggtgcagtctgcgaccatc
ccgcttttcatgagtaacaaagacgtggctgcagaagcggtcacaggcagtggaaaaact
ttggcgtttgtggttcccatactggaaattcttctcagacgggaagaaaaactaaagaaa
atgcaggttggggctataattatcacaccaacgagggaattggccattcaaattgatgag
gtgctgtcacatttcacaaaacacttccccatgttcagtcagattcttttaattggtgga
aagaaccccatggaagatgttgaaaagtttaaggagcatggtgggaacatcatcgtggcc
accccggggcgcctgcaggatctgttcaggaggaaagcggacgggctggacctggcgagc
tctgtgaaggctctggatgtgctggtgttggatgaagcagacagacttctagatatgggc
tttgaagcaagcttgaatgccattctggactttttgcccaagcagagaaggacaggtctg
ttctcagccacgcagacccaggaggtggagaacctggtgagggctgggctgcgcaacccc
gtccgcatctcggtcaaggagaagggagtggcagccagcaacacccagaaaaccccgaca
cgcctggagaactactacatgatctgcaaggcagatgaaaaatttaaccagttggtgcat
tttcttcggcagcacaaacaggaaaaacatctggtctttttcagcacttgtgcctgcgtg
gagtactatgggaaggctctggaatccttaattaagcaggtgaaaataatgagcatccac
gggaaaatgaagcacaagcgcaacaagattttcacggagtttcggaagctcccagggggc
attttggtgtgcacagatgtgatggcccgtggcatcgacattccagaagtgcactgggtg
ttgcagtacgatccacccagcagtgccagcgccttcgtgcatcgctgcggtcgcacggcg
cggatcggcaacgtgggcagtgccctggtgtttctgcttcccatggaagaatcctacatt
aacttcctctcaatcaaccaaaagtgtcccatgcaggaaatgaaaccgcagacagatgtg
ttggatcttcttcccaagctgaagtccatggccctggctgacagggcagtgtttgagaaa
gggatgaaagctttcgtgtcttacatccaggcttacgccaaacacgaatgtaacctcatc
ttccggatcaaagatctggattttgccagtcttgccagaggttttgcattgttaaaaatg
ccaaagatgcctgaactaagaggaaaatgttttccagactttactccagtcactatcaat
acagacaccatttcatttaaggataaaaacagagaaaaacagagacaaaagaaattagaa
gaacaaaggaaagaaagagaagaaaatcaagggaaaaagaaatttgtaaagaacaaagcg
tggtcaaagcagaaagccaagagggagaagaaaaagaaagtaacagctaagaggaagcgt
gaagagggctctgatattgaagacgaggatatggaagagttgctgaacgacacaaggctc
ttgaaaagactgaaaaagggaaaaattagtgaagaagagtttgagaagaaactaacaggc
aaccaaaggctcaaaacagaaactgctgaggacgtggaggctgaaggctga
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