Hirundo rustica (Barn swallow): 120760573
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Entry
120760573 CDS
T09369
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5 isoform X1
KO
K18493
LIM homeobox protein 5
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120760573 (LHX5)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
120760573 (LHX5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120760573
NCBI-ProteinID:
XP_039936938
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Position
17:9794944..9802301
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AA seq
420 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRF
GTKCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYL
NSPSLKEGSLNSAPGAGSCHASQWGRCCERVSSCTDRSLSPDLQDPMQDDTKETDNSTSS
DKETTNNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMR
VIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDY
QGDYYGPGGNYDFFPHGPPSQAQSPADSSYLQNSGPGSTPLGPLEPPLSGHHSSENQRYT
DMISHPDTPSPEPGMTGSLHPIPGEVFSGGPSPPFSMSSNSGYSGALSHPNPELSEAAVW
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcattgtgcgggctgcgagaggccgattttggaccgcttcctactgaacgtc
ttggacagggcatggcacatcaaatgcgtccagtgctgcgagtgcaagtgcaacctcacc
gagaaatgcttctccagggaagggaaactctactgcaaaaatgacttcttcaggaggttt
ggtaccaaatgcgccggctgctcccaagggatctctcccagtgacctcgtccggaaagcc
cggaataaagtctttcacctgaactgtttcacctgcatggtctgcaacaagcagctctcc
actggcgaggaactctatatcatcgacgaaaacaaatttgtttgcaaagaggattatttg
aactctcccagtttgaaggaaggcagcctcaactcagcgcccggggccggatcctgccac
gccagtcagtggggccgctgctgtgagcgagtgtcctcatgtacagacaggagtttgtcc
ccggatctccaggaccccatgcaggacgacaccaaggaaacggacaactcgacctcctcg
gacaaggagaccaccaacaacgagaacgaggagcagaactcgggcaccaagcggaggggc
ccccgcaccaccattaaagccaagcagctggagaccctcaaagctgccttcgccgccacc
cccaaacccacccgccacatccgggagcagctggcgcaggagaccggcctcaacatgaga
gtcatccaggtgtggttccagaaccgtcggtcgaaggagcggcggatgaagcagctgagc
gcgctgggcgcccgccggcacgccttcttccgcagcccccgcaggatgcggcccctcggc
ggccgcctcgacgagtccgagatgctcggctccacgccctacacgtactacggagattac
caaggtgactactacgggccgggaggcaactatgactttttcccccacgggccgccctcc
caagcccagtccccggccgactccagctaccttcagaactcaggacccggctccacaccc
ctgggacccttggagccccccctaagcggacaccactcctcagaaaaccaaaggtacacg
gatatgatctcgcaccccgacacccccagccccgagccggggatgacgggctcgctgcac
cccatcccgggggaggtcttcagcggggggcccagcccgcccttctccatgtccagcaat
agcggctacagcggggctctgtcgcaccccaacccggagctcagcgaggcggcggtgtgg
tag
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