Hirundo rustica (Barn swallow): 120760734
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Entry
120760734 CDS
T09369
Symbol
UBE3B
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120760734 (UBE3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120760734 (UBE3B)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120760734 (UBE3B)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
HECT type E3
120760734 (UBE3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
120760734
NCBI-ProteinID:
XP_039937214
LinkDB
All DBs
Position
17:4214525..4235072
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AA seq
1070 aa
AA seq
DB search
MFSASQSSRAQFLDKARQAREERRELKERERAAVQLQALVRRFLCRCRLQREIRKEVEDF
FGTNESGSSKRSALSVFRIARKLLFVFNPKEDKERFEKLCRCILSSMDVENEPKVWYVSL
ALSKDLTLLWIKQIKDILWFCCEFLKQLKPDILQDSRLVNLHLTMLVTFTDTSTWKILRG
KGETLRPAMNHICANIMGHLNQKGFYSVLQILLTNGLARSRPSLSKGSLTAIFSLALRPV
VAAQFSDNLLRSFLIHVMSVPAIMTHLATLTPERLAVIESQDLFRKFILFLSRESQCRDV
CVCLEGSHTLCLLGNLVFLGSLNDQVLEEETAHFVGVLIHMLSYCQKYVSQKKSNLTHWH
PVLGWFSQTVDYGLNESMPLLTKQLQHLWGVHMIRILFSDVLSKKLLENQEIAQLPTQPI
SPQNSLPMKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTTLTTLTQIR
LQILTGLTYLDDLLPKLWAFICELGPQGGLKLFLECLNNDTEESKRLLAMLMLFCDCSRH
LITILDDIEVYEEQISFKLEELVTISSFLNSFVFKMIWDGIVENARGETLELFHSVHGWL
MVLYERDCRRRFAPEDHWLRKDLKPSVLFQELDKDKKRAQLLLQYIPHVIPHKNRVLLFR
NMVTKEKEKLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQLSQNAMKGVIRVKFVNDL
GVDEAGIDQDGVFKEFLEEIIKKVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFV
GKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDG
DISDLGLTLSYDEDVMGQLVCHELVPGGKTIPVTNENKISYIHLMAHFRMHTQIKSQTAA
LISGFRSIIKPEWIRMFSAPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWD
ILANDFSPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGF
FTIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILREKLRYAISMNTGFELS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgccagccaatcctccagggcccagttcctggacaaggcccggcaggcgcgg
gaggagcggcgggagctgaaggagagggagagagctgcagtccagctccaggctctggtc
aggaggtttctgtgtcgctgccgcctgcagagagagatcaggaaagaggtggaggatttc
tttgggacaaatgagtctggctcaagtaaaagaagtgccctgtctgtgttcaggattgcc
aggaagctgctgtttgtgttcaaccccaaggaggacaaggagaggtttgaaaagctgtgc
cgttgtatcctgagcagcatggacgtggagaacgagcccaaggtgtggtatgtctcactg
gcactctccaaggacctcacgctcctctggatcaaacagatcaaagacatcctgtggttt
tgctgtgaattcctcaagcagctcaagcctgacatcctgcaggactccaggctggtgaac
ttgcacctcacgatgctggtcaccttcacggacacttccacctggaaaatcctccgggga
aaaggtgagaccctgagacctgccatgaaccacatctgtgccaacatcatgggccacctg
aaccagaagggcttctactccgtgctgcagattttgctaactaatggcttggcaagatcc
agaccttccctgtccaaaggttccttaactgccatcttctcccttgccttgcgccctgtg
gttgctgcacagttctccgacaatctgctgaggtccttcctgatccatgtcatgtctgtg
cctgctataatgactcaccttgctactctcacccctgagcgcctggcagtgatcgaatcc
caggatctcttccggaagttcatcctgttcctgagccgggaatcccagtgccgggatgtc
tgcgtgtgcctggagggcagtcacactctctgcttgctgggcaatctggtgttcctgggc
tccctgaatgaccaggtgctggaggaggagacagctcactttgtgggggtgctcatccac
atgctctcctactgccagaagtacgtgtcccagaagaaatccaacctcacccactggcac
cccgtgctgggctggttctcacagactgtggattatgggctgaacgagtccatgcccctg
ctgaccaagcagctgcagcacctctggggagtccacatgatccggatcctcttcagtgat
gtgctcagcaagaaactgctggaaaatcaggagatagctcagctgcccacacagccaatc
tcccctcagaacagccttcctatgaaaaacctgttcaagagagctttccagaagtcggcc
tcagtccggaacatcctgaagccggtgggagggaagcgcgtggactctgccgaggtgcag
aaggtttgcagcatctgtgtcctgtaccaaaccaccctgaccaccctcacccagatccgc
ctgcagatcctcacaggtctcacttacctggatgatctgctgcccaaattatgggctttc
atctgtgagctgggaccacagggggggttaaaactcttcctggagtgtttgaacaacgac
acagaggagtccaagaggctgctggccatgttgatgctcttctgcgactgctcccgtcac
ctcatcacgattctggatgacatcgaggtctacgaagagcagatttcgttcaaactggaa
gagctggtcaccatctcctctttcctgaattcctttgtgtttaagatgatctgggatgga
attgtagagaatgcccgaggggagaccctggagctgttccattctgtccatggctggctc
atggtgctgtacgagcgggattgtcgccggcgcttcgctcccgaggatcactggctgcgc
aaggacctcaaacccagcgtgctcttccaggagctggacaaggacaagaaacgagcccag
ctgctcctgcagtacatcccacatgtcattccccacaagaacagggtgctgcttttccgc
aacatggtcacgaaggagaaggagaagctggggctggtggagacgagctcggcgtcccct
cacgtcacccacatcaccatccgccgctcccgcatgctcgaggatggatacgagcagctc
cggcagctttcccagaacgccatgaagggagtgatcagggtgaagtttgtgaatgacctg
ggggtcgatgaggctggtattgatcaagatggagtcttcaaagagttcctggaagagatc
attaaaaaggtgtttgaccctgcactgaacctgttcaagaccaccagtggtgatgagagg
ctgtatccgtccccaacatcctacatccatgagaactacctgcagctcttcgagtttgtg
gggaagatgcttgggaaggctgtgtatgagggaatagttgtggatgtcccatttgcttcc
ttcttcttgagtcagctccttgggcaccaccacagtgtcttctacagctccgtggatgag
ctgccctccttggactcggagttctataaaaacctcacttcaattaagcgttatgatggt
gatatcagcgacctgggcttgacactgtcctatgatgaggatgtgatgggtcagctggtt
tgccacgaacttgttcctggagggaagaccattcccgttaccaatgaaaataagatcagc
tacatccacctgatggcgcatttccggatgcacacccagatcaagagccagactgccgct
ctcatcagcggcttcaggtccatcatcaagcccgagtggatccggatgttttccgcgccg
gagctgcagcgcctcatctccggggacaacgccgagatcgacctggaggacctgaagaaa
cacacggtgtactacgggggcttccacggcagtcaccgtgtcatcatctggctctgggac
atcctggccaacgacttcagccctgaggagagagccatgttcctcaagtttgtcaccagc
tgctccaggcctccgcttctgggctttgcctacctcaagcctcctttctccatccgctgc
gtggaagtgtctgatgaccaggacacgggggacaccctgggcagcgttctgcgcggcttc
ttcaccatccgcaagaaggagccgggcgggcgcctccccacctcctccacgtgtttcaac
ctcctcaagctccccaactacagcaagaagagcatcctgcgggagaagctgcgctacgcc
atcagcatgaacaccggcttcgagctgtcctag
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