Hirundo rustica (Barn swallow): 120760884
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Entry
120760884 CDS
T09369
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04020
Calcium signaling pathway
hrt04080
Neuroactive ligand-receptor interaction
hrt04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120760884 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120760884 (GRIN2C)
04082 Neuroactive ligand signaling
120760884 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120760884 (GRIN2C)
Ion channels [BR:
hrt04040
]
Ligand-gated channels
Glutamate (ionotropic)
120760884 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
120760884
NCBI-ProteinID:
XP_039937544
LinkDB
All DBs
Position
18:5097987..5114597
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AA seq
1347 aa
AA seq
DB search
MRGAVSCAGRDTLVDMGRAPAHALLLSMVLGCSAAFTDILLPGPEEPVVNVAVVFGGTSY
PLHIRSRLSPQSFLDMPLEIHPITVIVNNTNPSTLLTQICNILASHKIHGIIFEDNVGTE
AVAQILDFISSQTQVPIISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDW
GSFAVITSLYPGYNIFLDVIRSFTDASYFGWELQEVLTFEMSQEQSSSRTQRLLRQIDAQ
VLIVYCSREEAEYLFSMAEQAGLVGPGYVWIVPSMTVGNMEVPPSSFPVGLISVVTESWK
LSLRQKVRDGVAIIAMGAASFFRAHGYLPEVGRDCWTPTRATATNTSFYRHLLNVTWEHR
DFSFNEGGYLVRPTMVVITLNQHRLWEMVGKWEKGIIHMKYPVWPRYGSFMQPVVDNRHL
TVATLEERPFVIVENTDPSTGVCVRNTVPCRKQTNSSQSGDGLVDPYTKLCCKGFCIDIL
KKLAKAVKFSYDLYLVTNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDF
SVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGY
NQNLTSGKRPGGPSFTIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLAS
YTANLAAFMIQEQYIDTVSGLSDRKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTH
MVKYNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIA
LQKDSRWKRAIDLALLQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYML
LVAMGLSLLVFSWEHLVYWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQTLSSPGRAPTP
DVTASSAQANVLKMLQAAKEMVTTASVGGSLEQATRTIEDWSNHSERLQTTFSLRTPQLV
VQNSTGTHRGPPSGPHPAERLGRTYAPKGAPLGLPLPQPIPVDSRSHGEENRRGANEHPH
LLHPLKFRGGCVGDEALTGFPHLLVKTSPGGDYGEQMLVGNHVGAPLPPPTSPRDLPPPD
IYREHKRPPGRGDRLQNNPLLQRDGAHGGSGTLPRLLSAAEKREVGSAFLSPSCSRGAFP
KVTRTCRARGEPARPEAAAMEREKLSRWASSARAPGERGEKRRPAGLRRCGAARPPARAD
VPDLFPEAEAGYGCGSRCPQAAGRLPPRSPVTRLPSYREACRQNPRATATVPACAPHAYV
NSYADLPLYARRLSRWSPPPRERSVVHPCDRGSGRWDGACRDCGRRGELALLRAVGAERR
DPLVARGVASPCAGGSWRRVSSLESEV
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggggctgtgtcctgtgctggcagggacacgctggtggacatgggcagagcgccg
gcgcacgctctgctactgtcgatggtgctgggctgctcggctgccttcacggacatcctg
ctgccaggccctgaggagccggtggtcaacgtggccgtggtgtttgggggcacatcctac
cctctgcacatccggtcccgcctgagcccccagagcttcctggacatgcccctggagatc
caccccatcactgttatcgtcaacaacaccaaccccagcaccctcctcacccagatctgc
aacatcctcgccagccacaagatccacggcatcatctttgaagacaacgtgggcacagag
gccgtggcccagatccttgacttcatctcctcccagacacaggtccctatcatcagcatc
agtggcgggtctgcagtggtcctgactccaaaggagcccggatcagctttcctgcagttg
ggtgtctccattgagcagcaaatccaggtgatcttcaaagtgctggaggaatacgactgg
ggctcctttgctgtcatcaccagcctctacccaggctacaacatcttcctggacgtcatc
cgctccttcacggatgccagctactttggctgggagctgcaggaggtgctcaccttcgag
atgagccaggagcagagcagctccaggacgcagcggctcttgcgccagattgatgcccag
gtcctcattgtttactgctcccgagaggaggctgagtatctcttctccatggcagaacaa
gccgggcttgtggggccaggatacgtctggatcgtgcccagcatgacagtgggcaacatg
gaggtgccgccctcctccttcccggttggcctcatcagcgtggtgacggagagctggaag
ctgagcctgcggcagaaggtgcgggatggtgtggccatcattgccatgggggcagccagc
ttcttccgtgcccatggctacctcccagaggtggggcgggactgctggacccccaccagg
gccactgccaccaacacaagcttctaccggcacctcctcaatgtgacgtgggagcacagg
gacttctccttcaatgaaggtggctacctggtcaggcccaccatggtggtgatcacgctc
aaccagcaccggctctgggagatggtgggcaaatgggaaaaaggcatcatccacatgaag
tacccggtgtggccccgctatggctccttcatgcagcccgtggttgacaaccgccacctg
acagtggccaccctggaggagagacccttcgtcatcgtggagaacacggaccccagcacg
ggggtctgcgtgcgcaacaccgtgccctgccgcaagcagaccaactcgtcccagagtggt
gatggccttgtggatccctacaccaagctgtgctgcaaaggtttctgcatcgacatcctg
aagaagctggccaaggcagtgaagttctcctacgacctctacctggtgactaatggcaaa
catggcaagattgtccgtggggtctggaacggcatgattggtgaggtgtactacaagaga
gcagacatggccatcggctccctcaccatcaacgaggagcggtccgagatcgtggatttc
tccgtgccctttgtggagacgggcatcagcgtcatggtggcccggagcaatggcaccgtg
tccccctccgctttcctggagccttatagcccagctgtgtgggtcatgatgtttgtcatg
tgcctcactgtggtggccatcaccgtctttgtgttcgagtatttcagccctgttggctac
aaccagaacctcaccagtggcaagaggccaggaggtccctccttcaccattggcaagtcc
gtgtggctgctgtgggctctggtcttcaacaactcagtccccatcgagaaccccaagggc
accaccagcaagatcatggtgctcatctgggccttcttcgccgtcatcttcctcgccagc
tacacggccaacctggctgccttcatgatccaggagcagtacattgacactgtgtcgggg
ctgagtgacaggaagttccagaggccacaggagcagtacccacccttccgctttggcact
gtccccaacggcagcaccgagaggaacatccgcagcaactaccccgacatgcacacccac
atggtgaagtacaaccagcgctctgtggaggatgccctcaccagcctcaaaatggggaag
ttggatgccttcatctacgatgcggcagtgctcaactacatggcgggcaaggacgagggc
tgcaagctggtgaccatcggcagcgggaaggtgtttgccaccacgggctacggcatcgcc
ctgcagaaggactcacgctggaagcgggccattgacctggccctgctccagttcctggga
gacggtgagacccagaagctggagacggtttggctgtcagggatctgccagaatgagaag
aatgaggtgatgagcagcaagctggacattgacaacatggctggggttttctacatgctg
ctggtggccatggggctgagcctgctggtcttctcctgggagcaccttgtctactggaag
ctgcgtcattctgtccccaagtcccacaagcttgatttcctcctggccatcagcaggggc
atctacagctgcttcaatggggtgcagaccctgtcgagccccgggcgggcgcccacaccc
gatgtcacagccagctcagcccaggccaatgtgctgaaaatgctgcaggcggccaaagag
atggtgacaacggccagcgtgggcggctcactggagcaggccacccgcaccattgaggac
tggagcaaccacagcgagcgcctgcagaccaccttctccctgaggacaccccagctcgtg
gtgcagaacagcactggcacacaccgggggcccccctctggcccacaccctgccgagagg
ctggggagaacctacgctcccaagggtgctcccctggggcttccgctgccccagcccatc
cctgtggactcccgttcgcacggggaggagaaccggagaggggcaaacgagcacccccac
ctgctacaccccctgaagtttcggggcggctgtgtaggggatgaagccctcacaggtttc
ccccacctcctggtgaagacttctccaggaggggattatggggagcagatgctggtgggg
aaccacgtcggggcgcccctcccgccccccacatcccccagggacctcccaccgccggac
atctacagggagcacaagcggccgccgggacgcggggaccggctgcaaaacaaccccctt
ctccagagggacggggcacacgggggctcaggaactctgccccggctgctctcggcagcg
gagaagcgggaggtgggcagcgcttttctgtctccatcctgctctcgcggagccttcccg
aaagtcaccaggacttgcagagccaggggcgagccggcgcggccggaggcggcggcgatg
gagcgggagaagctgagccggtgggcgagctcggccagggcgcccggggagcgcggcgag
aagcggcgtccagcggggctgcggcgctgcggagccgcccgcccgcccgcccgcgccgac
gtgcccgacctcttccccgaagctgaggccggctacggctgcggctcccgctgcccgcag
gccgctggccggctgccgccgcgctcgcccgtgacccggctgccgtcctaccgggaggct
tgccggcaaaacccccgtgccaccgccaccgtgccggcgtgcgctccccacgcctacgtg
aactcctacgccgacctgcccctctacgcgagacgcctctcgcggtggtccccgccgccc
cgggagcgctccgtggtgcatccctgcgaccggggatccgggcgctgggacggcgcctgc
agagactgtgggaggcgcggggagctggccttgctgcgggcggtgggggcggagaggagg
gacccgctggtggcccgcggggtggcgagtccctgcgccggcgggtcctggcggcgggtc
tccagcctggagtcggaggtgtga
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