Hirundo rustica (Barn swallow): 120760928
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Entry
120760928 CDS
T09369
Symbol
ITGB4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04382
Cornified envelope formation
hrt04510
Focal adhesion
hrt04512
ECM-receptor interaction
hrt04518
Integrin signaling
hrt04810
Regulation of actin cytoskeleton
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120760928 (ITGB4)
04518 Integrin signaling
120760928 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120760928 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120760928 (ITGB4)
04810 Regulation of actin cytoskeleton
120760928 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120760928 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120760928 (ITGB4)
04515 Cell adhesion molecules [BR:
hrt04515
]
120760928 (ITGB4)
04090 CD molecules [BR:
hrt04090
]
120760928 (ITGB4)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120760928 (ITGB4)
Exosomal proteins of bladder cancer cells
120760928 (ITGB4)
Cell adhesion molecules [BR:
hrt04515
]
Integrins
Integrin beta subunits
120760928 (ITGB4)
CD molecules [BR:
hrt04090
]
Proteins
120760928 (ITGB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
FN3_DSCAM-DSCAML_C
I-EGF_1
PSI_integrin
EGF_2
EGF_Teneurin
EGF_integrin
EGF_TEN
SEA
vWA_SIBA-E
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
120760928
NCBI-ProteinID:
XP_039937639
LinkDB
All DBs
Position
18:complement(4438921..4467200)
Genome browser
AA seq
1862 aa
AA seq
DB search
MRRKRMDVLPRACARLLLVSLLCTTGLCQWSKNNRCVLSRAKSCTECIRVDKDCSFCTDK
SFEEPRCDLRENLLRSGCGEASIVDTQGEMRTLKNSSINTFLQRTQVSPQAMYMRLRAGE
EMSFDMDVFQPKESPVDLYILMDFSHSMSDDLDNLKRMGHNLADFLQALTSNYTIGFGKF
VDKVSSPQTDMRPEKLREPWPDTDSPFSFKNVIRLTSNINHFSQELSKERISANLDAPEG
GFDAILQTAVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEQCHLDSHG
TYVYDTKQDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQQDSSN
IVELLRTAFERIRSKMDIRADFTPKALKTDFTSALFEKTESGSFHITRGKVSKFHMHVKA
LEYVGGQHVCSLPEKDRLGVIHVKPTSLSDSLTVTAAVVCDVCPCEQQQELDSPKCSFHG
NFVCGQCICHPGWRGDTCDCSPASSPNNEACVRPGDVEPCSGRGECLCGKCQCYSEDQTP
RFDGSFCEFDVLQCPRTSGFLCNDRGRCSRGACVCESGWEGPGCECPTSNDTCIDSRGGI
CNNHGRCECGRCICDRASLYTSSTCEISYSLGFQAVCESIRDCVRCQTWGTGNLKRNCSS
CQLQIQMVEEVKKEEAGKYCSFQDEDDDCTYHYTLEGDPSAIPNTTVRVQKNKECPPGSF
LWLIPLLIFLILLLGLLLLLCWKFCACCKACLALLPCCARGRTVGFKEDHYMLRHSLMSS
DHLDTPLVRSGSLKGRDTVRWKIHNNVHKQGITSAAATNPKDLIPYGLSLRLARLFTQNL
VKPDTRECEQLRKEVEENLNEVFKHIPGCHKVQQTKFRLQPNSGKRQDHTIVDTVLTAPY
SAKPDIIKVVEKHVSHEAFNDLKVAPGYYTVTSDQDAQGMVEFQEAVELVDVRVPLFIRD
DDDDEKQLQVEAIEVPNGIAKIGRRVVNITIIKEQASSLITFLQPAYSHSRFDKLAKIPV
IREIIDNGKSQVTYRTRDLTAKNGRDYILTEGELVFQPGETRKEVQVPLLELTEIDTLLN
NCQLKQFAVDLLHPKYGAKIGRYPQTTVTIADPELVDGVPSMTGLAQVPQSPKGRLSAPL
NPDARALSSREISFNWFPPPGKPLGYKVKYWIQGDPESEAHLIDVKTPSAELTNLYPFCD
YEMQVCAYNSMGEGTYSDITHCRTLEEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGVIT
AYEVSYGLVNEDNVPIGPVKKVLVEEPKKRMVLIENLRESQPYRYTVKARNGAGWGPQRE
ATINLATQPKRPMSIPIIPDVPIIDAEGGEDYESYLMYSTDVLRSPAGSKRPSVSDDSGS
RWKFVPLLGEDLDLRRITWRLPPETIPRLSGSSRLSSDTEGLLHEEDSAVAPGSARRSAT
PQPQAEHLLNGRVDFSFPSSGSGTLTGTSNISYHQLSSHMHQEHRVMGSSSLTRDYSTML
MGHDYPGTLLPPIHEDAGRTLLQPRDVGFRSRAKVKGYYPSIGCRDSVIMTDVSTGMGKY
IDSRKPLGIPDTPSRLVFSALGPTSLKVSWQEPRCEKEVQGYSVQYQLLNGGEVHRISIP
NPSQNSVVVEDLLPNHSYIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPGTPFTL
STPCAPGPLVFTALSPDSLHLSWERPREPNGPILGYRITCEMLHGGGEPRTIYVEGDNLE
TTLTVPHLSENVPYKFKVQANTTQGFGPEREGLITIESQDRGAFSQFGGQQYVREVYKFP
TEYTTKTSISHSSLDPHFTDGMVVTTQHVENSSSTLTQEFVSHTVLASGTLTQQVERQFY
QA
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaagaggatggatgtgctgccacgggcctgtgccaggctgctcctggtgtcc
ctgctctgcaccaccggcctctgccaatggagcaaaaacaaccgctgtgtgctgtcccgg
gcaaagagctgcactgagtgcatccgggtggataaggactgttccttctgcaccgacaag
agctttgaggagccgcgctgtgacctgcgggagaacctgctgcgctccggctgcggcgag
gccagcatcgtggacacgcagggggagatgaggacactgaagaattccagtatcaacaca
ttcctgcagaggacccaggtgtccccccaggccatgtacatgcggctgcgggctggggag
gagatgagcttcgacatggatgtcttccagcccaaggagagccctgtggatctctacatc
ctcatggacttctcccactccatgtctgatgatctggacaacctcaaaaggatggggcat
aacctagcggacttcctgcaagccctgacttctaattacaccattggattcggcaagttt
gtggacaaagtctcatcccctcagacagacatgagacccgaaaagctgcgtgagccctgg
cccgacaccgactccccgttctccttcaagaacgtcatccgcctgaccagcaacatcaac
cacttcagccaggagctcagcaaggagcgcatctccgccaacctggatgcccccgagggt
ggcttcgatgccatcctgcagacagctgtttgcaaggataagatcggctggagaaaggac
agcactcacctgctcgtgttctccaccgagtctgcctttcactatgaagctgatgggacc
aacgtcctggcagggatactggcaaggaacgacgagcagtgtcacctggacagccacggc
acctacgtgtacgacaccaagcaggactatccttccgtgcccaccctcgtgcgcctcttg
ggccagcacaacatcatccccatctttgctgtcaccaaccactcctacagctactatgag
aaactgcacaagtatttccccatctccgagatcggggtgctccagcaagactcttccaac
attgtggaattgctccgcacagcctttgagcgcatccgctccaagatggacattcgggct
gacttcactcccaaagccctgaagacagacttcacctccgctttatttgaaaagacagaa
tccggctccttccacatcacccgtggaaaagtgagcaagttccacatgcacgtgaaggcc
ctcgagtacgttggtgggcagcacgtgtgcagcctccccgagaaggaccggcttggagtc
atccacgtgaaacccacgtccctgagtgacagcctcacagtgacagctgctgtcgtctgc
gacgtgtgtccctgtgaacagcaacaagagttggactcgcccaagtgtagtttccatggg
aactttgtctgcggacagtgcatctgccacccgggctggcgaggggacacctgcgactgc
tccccggcgtcatcccccaacaacgaagcctgcgtccggcccggggacgtggagccgtgc
tcggggcggggcgagtgcctgtgcgggaagtgccagtgctactccgaggaccagaccccg
cgcttcgacggctccttctgcgagttcgacgtcctgcagtgcccgcgcacctccggcttc
ctctgcaacgatcgtggccgctgctccaggggcgcctgcgtgtgcgagagcggctgggag
ggcccgggctgtgaatgtcccacgagcaacgacacctgcatcgacagccgagggggcatt
tgcaataaccacgggaggtgtgaatgtggcaggtgcatctgtgacagggcttcgctgtac
accagctccacctgtgaaatcagctactccctgggcttccaggctgtgtgtgagagcatc
cgggactgtgtccgctgccagacctgggggacgggcaacctgaaaaggaactgcagctcg
tgccagctccagatccagatggtggaggaggtgaagaaagaggaggctggcaagtactgc
tccttccaggatgaggatgatgactgcacctaccactacaccctggagggagaccccagt
gccatccccaacaccactgtccgtgtgcagaagaataaagagtgcccgcctgggagcttc
ctctggctcatcccactgctcatcttcctcatcctgctcctggggctgctgctcttgctc
tgctggaagttctgtgcctgctgcaaggcttgcctggccctgcttccctgctgcgcacga
ggtcgcaccgttggcttcaaggaggaccactacatgctccgccacagcctcatgtcctcc
gaccacctggacacgcccctggtgcgcagcggctccctcaagggccgggacacggtgcgc
tggaagatccacaacaacgtccacaagcagggcatcacctccgccgctgccaccaacccc
aaggacctcattccctacgggctgtctctgaggctggcgcggcttttcacgcagaacctg
gtgaaaccggacacgcgggagtgcgagcagcttcgcaaggaagtggaggagaacctgaat
gaggttttcaagcacattcctggctgccacaaggtccagcagaccaagttcaggttacag
cccaattctgggaaaaggcaggatcacaccattgtggacacagtgctcactgccccttac
tcagccaagccagacatcatcaaagtggtggagaaacacgtttcccatgaggcttttaat
gacctgaaggttgcaccgggttattacactgtgacctcagaccaagatgctcagggaatg
gtggagttccaagaggctgtggagctggtggacgtccgtgtcccgctctttatcagggac
gatgatgatgatgagaagcagctgcaggtggaggccattgaggtccccaatggcatcgca
aagattgggcgcagggttgtcaacatcaccatcatcaaagagcaagccagcagcctcatc
accttcctgcagccagcctattcccacagccgctttgataagctggccaagatccctgtc
attcgggagatcatagacaacgggaaatcccaagtcacctacaggacccgggatctcacc
gccaagaacggcagggactacatcctcacggagggtgaactggtcttccagcccggggag
acccgaaaggaggtgcaggtgcccttgctggagctgacagagatagacaccctcctcaac
aactgccaactcaagcaatttgctgtcgacctcctccaccccaagtacggcgccaagatc
ggccgctacccccagaccacggtgaccattgctgacccagagctggtggatggtgtcccc
tcgatgactggcctggcccaggtcccccagtcccccaaaggccgcctgagtgcaccgctt
aatcctgatgcccgtgccctcagctccagggaaatcagcttcaactggtttcctccaccg
ggaaaacccctggggtacaaggtgaaatactggatccagggagaccctgagtcagaagcc
catctcatcgatgtcaaaaccccatcagcagagctgacaaatctttaccccttctgtgac
tacgagatgcaagtgtgtgcctacaactccatgggagaagggacttactcggacatcacc
cactgccgcacgctggaggaggtgcccagcgagcccgggcgcttggctttcaacgtcgtg
tcttccaccgtgacccagctgagctgggctgagcctgcagaaaccaacggggtgatcacg
gcctacgaagtcagttatgggcttgtcaacgaggacaacgtacccattgggcccgtgaag
aaggtgctggttgaagagcccaagaagcgcatggtgctgatcgagaacctgcgggagtca
cagccctatcgctacacggtgaaggccaggaacggcgcgggctgggggccccagagagaa
gccaccatcaacctcgccacgcagcccaagcgccccatgtccatccccatcatccctgat
gtccctatcatcgacgcagagggaggtgaggactacgagagctacctgatgtacagcaca
gacgtgctccgctctccagccggcagcaagaggcccagtgtctctgatgattcaggctcc
aggtggaaatttgtaccgttgctgggagaagacctggaccttcgccgcatcacctggagg
ctcccacccgaaaccattccgcgcctctctggcagcagccgcctctcctcggacaccgag
gggctcctccacgaggaggacagcgctgtggctcctggcagcgcgaggaggagcgcgacg
ccccagccccaagcagagcacttgctgaatggccgggtggacttctccttccccagcagt
ggcagtggcaccctgaccgggacatccaacatcagctaccaccagctgagctcccacatg
caccaggagcacagggtgatgggcagctcctcgctgacaagagactactccacgatgctg
atggggcacgattacccagggacactcctccctcccatccatgaagatgctgggaggaca
ctcctccagccccgggacgtgggtttcaggagcagggcaaaggtgaagggttactacccc
agcattggctgtcgggactctgtaatcatgactgatgtgtccacagggatgggcaagtac
atagactccaggaagccgctgggcatccccgacacccccagccgcctggtgttctctgcc
ctgggccccacgtccctgaaggtgagctggcaggagccacgctgcgagaaggaggtgcag
ggctacagtgtgcagtaccagctcctcaacggaggagaggtgcacaggatcagcatcccc
aaccccagccagaactcagtggtggtggaggacctgctgcccaaccactcctacatcttc
aaggtgaaggcgcagagcgaggagggctggggccccgagagggagggagtcatcaccatc
gagtcccaggtggacccgcagagcccgctcagtcccgtgccaggtacccccttcaccctg
agcaccccctgtgcccctggaccactggttttcactgccctcagcccggattctctgcac
ctcagctgggagagaccccgtgagcccaacgggcccatcctgggctacaggatcacctgt
gagatgctgcatggaggaggggaacccagaacaatctatgtcgaaggagacaacctggaa
accacgctgactgtgccccacctgagtgagaatgtcccgtacaagttcaaagtgcaagcc
aacaccacccaaggctttgggccagagagagaaggcctcatcaccattgaatctcaggac
agaggtgctttctcccagtttggaggacagcagtacgtgagagaagtttataaattcccc
actgaatataccaccaaaaccagcatcagccattcctctctggatccccacttcacagat
gggatggtggtgaccacccagcacgtggagaactccagcagcaccctcacccaggagttt
gtgagccacaccgtgctggccagcgggaccctcacgcagcaggtggagaggcagttctac
caggcctga
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integrated database retrieval system
