Hirundo rustica (Barn swallow): 120760944
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Entry
120760944 CDS
T09369
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120760944 (RHBDL3)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
120760944 (RHBDL3)
Peptidases and inhibitors [BR:
hrt01002
]
Serine peptidases
Family S54: Rhomboid family
120760944 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_11
EF-hand_8
AIF-1
EF-hand_9
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
120760944
NCBI-ProteinID:
XP_039937659
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Position
18:8185470..8247831
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AA seq
407 aa
AA seq
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MGDKLPEPHASSSPAVAAGSEAEEIEVLDSEDVLPMAAEDHWKALFDQFDPDNTGYISTE
KFRSLLQRHGSELDPHKLEVLLALADSNSEGRICYQDFVNLMSNKRSNSFRQAILQGNRR
LCSKALLEETGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITITIVEVAFF
LYNGVVLDRFVLQVSHPLYLKNALLYHPQLRAQAWRYLTYIFMHAGIEHLGLNVVLQLLV
GVPLEMVHGAARISFVYVAGVVAGSLAVSVADMRAPVVGSSGGVYALVSAHLANIVMNWS
GMKCQFKLLRMAVALICMSFEFGRAVWLRFHPSAYPPCPHPSFMAHLGGVMVGITLGVII
LRNYEQRLQDQTLWWIFLSIYVIFVLFAIFWNIFAYSLLDLKLPPPP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaagctgccggagcctcacgccagctcttcccctgctgtggctgccggctcg
gaggcggaagaaatcgaggtgctggactccgaggatgtcctacctatggctgcggaggat
cactggaaagccctatttgatcagtttgatcctgacaacactggctacatcagcactgag
aagtttcgctcccttctccagagacacggctcggagctggacccccacaagctggaggtc
ctgctagccctggcagacagcaactctgaggggaggatctgctaccaggacttcgtcaac
ctgatgagcaacaaaaggtcgaacagtttccgccaagccatcctgcaggggaacaggagg
ctgtgcagcaaagcgctgctggaggagacggggctgagcctctcgcagaggctgatccgg
cacgtggcctacgagaccctgccgcgggagatcgaccgcaagtggtactacgacagctac
acctgctgccccccgccctggttcatgatcaccatcactattgtagaggttgcctttttt
ctttacaatggagtggtcttagacagatttgtgctgcaagtcagccaccccttgtacctg
aagaatgcattactgtaccatcctcagcttcgggcccaggcttggaggtacctaacctac
atattcatgcatgcagggatagaacaccttgggctcaatgttgtccttcagctcttggtt
ggggttcctctggaaatggtgcacggagctgcgaggatcagttttgtgtacgttgcagga
gttgtggcagggtccctggcagtgtcagtggctgacatgagggcgccggtggtgggctcc
tctggaggtgtgtacgctcttgtctccgctcacctggccaatattgtgatgaactggtca
ggaatgaagtgccaattcaagctgctgcgcatggctgttgccttgatctgtatgagcttt
gaatttggaagagccgtgtggctgcgattccacccctccgcttaccccccgtgcccccac
cccagcttcatggctcacctgggaggggtgatggttggaatcacccttggtgtcatcatc
ctgaggaactatgagcagagactccaagatcagactttatggtggatcttcctttctatt
tatgtcatttttgtcttgtttgccatattctggaatatttttgcctacagtctgttggat
ctaaagctacctccccctccttga
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