Hirundo rustica (Barn swallow): 120760975
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Entry
120760975 CDS
T09369
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X2
KO
K17908
autophagy-related protein 18
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04136
Autophagy - other
hrt04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120760975 (WIPI1)
04136 Autophagy - other
120760975 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120760975 (WIPI1)
03029 Mitochondrial biogenesis [BR:
hrt03029
]
120760975 (WIPI1)
Membrane trafficking [BR:
hrt04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120760975 (WIPI1)
Mitochondrial biogenesis [BR:
hrt03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120760975 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_NWD2_C
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
BCAS3_WD40
EIF3I
DUF5711
Beta-prop_Vps41
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
120760975
NCBI-ProteinID:
XP_039937710
LinkDB
All DBs
Position
18:complement(9540450..9560505)
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AA seq
442 aa
AA seq
DB search
MEAAAEAPGAPAALSCFSYNQDCTSLAIGTTTGYRLFSLSSVEQLDQVHESNEIPDVYIV
ERLFSSSLVVVVSHAKPQQMNVYHFKKGTEICNYSYSSKILSIRLNRQRLVVCLEESIYI
HNIKDMKLLKTILDTPPNTTGLCALSINHANSYLAYPGSATSGEIVLYDGNTLKTACTIP
AHDGPLAALAFNSTGSKLASASEKGTVIRVFSIPGGQKLYEFRRGMKRYVNISSLVFSMD
SQFLCASSNTETVHIFKLEHLTDSRPEEPPTWSGYMGKMFQAATNYLPAQVSGMMSQDRA
FATVRLNVSGQRNICALSTIQKLPRLLVTTSDGHLYIYNLDPQDGGECVLIKNHSLLGSG
KMEENKENDLQPPQSYAATVARQSTVPSTSTMPGYSEDGGALRGEVIPEHEFATGPVCLD
DENEFPPIILCRGGQPGKAKRS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcggccgaggccccgggggcgcccgcggcgctcagctgcttctcctacaac
caggactgcacctccctggcaatcggaaccacaactggatacagacttttctccttaagt
tctgtggagcaactggaccaggtccacgaaagcaatgaaatcccagatgtttacatcgtg
gagcgtctgttctccagcagccttgtggttgtggtcagccatgccaagccacagcagatg
aatgtctaccacttcaagaaagggacagagatctgcaactacagctattccagtaaaatc
ctgtccatccggctgaaccggcagaggctggtggtctgcctggaagagtcgatttacatc
cataacatcaaggacatgaagcttttgaagactattctggatacacctcccaacacaaca
ggtctgtgtgctctctccatcaaccacgccaactcctacttggcttatcccggcagcgcg
accagcggagagatcgtgctttacgacggaaatactttgaaaacagcctgcaccattcct
gcccatgacgggcctctggccgctctcgccttcaactccaccggctccaaattggccagt
gcttctgaaaaaggcacagtcattcgtgtattttccattcctggggggcaaaaactctat
gaattccggcgagggatgaaaaggtacgtgaacatcagctccctggtgttcagcatggat
tcccagttcctctgtgcttccagcaacacggagaccgtgcacatcttcaaactggagcat
ctcacagacagccggccagaggagcctccaacctggagtggttacatgggaaagatgttc
caggctgctaccaactacctccctgcccaggtgtcgggcatgatgagccaggaccgagcc
tttgccaccgtccggctgaacgtctccggacagaggaacatctgtgccctctccacgatt
cagaagctgcctcggctgttggtgacgacgtcggatggacatctctacatctataacctg
gacccgcaggacggaggggagtgtgtcttaattaaaaatcacagtctgcttggctcagga
aagatggaggagaacaaagagaacgaccttcagcctcctcaatcttatgcagcaaccgta
gccagacaaagtacagtgccttcaacttcgaccatgccaggttactcggaggacggcgga
gccctgcggggggaggttatcccggagcacgagtttgcaactggaccggtctgtctggac
gatgagaatgagtttcctcctataatcttgtgccgtggaggtcagccgggcaaggcgaag
aggtcgtga
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