Hirundo rustica (Barn swallow): 120761011
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Entry
120761011 CDS
T09369
Symbol
GSDME
Name
(RefSeq) gasdermin-E
KO
K22146
gasdermin-E
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
120761011 (GSDME)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrt02000
]
120761011 (GSDME)
Transporters [BR:
hrt02000
]
Other transporters
Pores ion channels [TC:
1
]
120761011 (GSDME)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
120761011
NCBI-ProteinID:
XP_039937778
LinkDB
All DBs
Position
1:123518969..123544874
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AA seq
498 aa
AA seq
DB search
MFAKATKNFVRETDSGGDLIPVSHLNASDKLQLLSLVTKRRKFWCWQKPKYHFLTVTLSD
VLTEDKPIKPVIVESDFAKYMGKFEDFIQGSIEASFVKISLGAGGKGYVENQSSFGNLRK
QEIDLQQLMRDVKDRTINLNSSLLQQVIERKREVLCILREKIITTQRCTISEHIQTEEKV
SGVVGCAAKTIKVSVNESGSLKDSSVILEIPPATTIAYGVIELFIKRNGQFEFCLLDEQQ
GGFEKESTEGSASPVQFRDASFLYQPDAVDNEMYSGAKNLIPSDASISILKQDLSRLKTQ
FQPFVKLPEDKQRALHKTLCELLLREEMVTALGDMFDDICAGDEPDLEELKLEQQKDLHD
FLQLLGCSLQSELLLQKYQPQDEELFSATHLLISAISELPDETLVLLRACCDLQVVPALC
CLPNVASADGTVALSSPLMATLADRERFEVVQRLFASSNINLEMAESSVKAVTVKEPRFF
PLVLYVALYGFHALDGNV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaaaagcaacgaagaatttcgtgagagaaactgacagtggaggtgacttgatc
cctgtctcccacttgaacgcctcagacaagctgcagcttttgagcttagttacgaagagg
aggaaattctggtgctggcagaagcccaaatatcatttcttgacagtcaccctgagtgat
gtgcttactgaagacaaaccaataaaaccagtgattgtggagtctgactttgcaaaatat
atggggaagtttgaagattttattcaaggaagtattgaagcatcatttgtgaaaatcagc
ctgggagctggagggaagggctacgtggaaaaccagtcctcatttggaaacctgaggaag
caggagattgacttgcagcagcttatgagagatgtcaaggacagaacaataaatctaaat
agcagtttactgcaacaagtaatagaaagaaaacgtgaagtgctgtgcatcttgagagaa
aagataatcacaactcagaggtgtacaatatctgaacatatccagacagaagaaaaagtc
agtggtgtggtgggatgcgctgcaaaaacaataaaggtttcagtaaatgaaagtggaagt
ctgaaggattctagtgtgatccttgaaattcctcctgcaaccactattgcctatggagtg
attgaactgtttataaagcgcaatggccagtttgagttctgtctgctagatgaacagcaa
ggaggttttgaaaaagaaagcacagaaggctcagcttctccagttcaattcagagatgcg
tcgttcctctatcagccagatgctgttgataatgagatgtactctggggctaaaaacctc
attcccagtgatgcttctataagtatattgaaacaagatctgtcacggttgaagacccag
ttccagccctttgtgaagcttccagaagacaagcaaagagctttacataaaaccctttgt
gaactcttgctccgtgaagaaatggtgactgccctgggggacatgtttgatgatatctgc
gcaggagacgagccagatctggaggagttaaaacttgaacaacaaaaagatctccatgac
ttcttgcagctcttagggtgcagtttacagagtgagctgttgttgcagaaatatcagcct
caggatgaagaacttttctcagctactcaccttcttatcagtgctatatctgagctgcct
gatgagacgcttgtgctgctgcgtgcctgctgtgatcttcaggttgttccggccttgtgt
tgtttgcctaacgtcgcttcagctgatggcaccgtggcgctgagcagtcctttgatggcc
actctggctgacagagaaaggtttgaggtcgtgcaaaggctgtttgcttcatcaaacatt
aatctggaaatggcagagtcttctgtaaaagctgtaactgtgaaagaaccgagattcttc
cctcttgttctttatgttgcgctgtatggatttcatgctttagatgggaatgtatag
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