Hirundo rustica (Barn swallow): 120761049
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Entry
120761049 CDS
T09369
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120761049 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120761049 (NUP85)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120761049 (NUP85)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120761049 (NUP85)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120761049 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
120761049
NCBI-ProteinID:
XP_039937828
LinkDB
All DBs
Position
18:complement(4873860..4884757)
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AA seq
710 aa
AA seq
DB search
MDEPDAEPPLVVVPGADSSSRQLCFAWGPAEVLVCETLFSRAGGSRSRFLSRSPCPSRFC
GEGRAGAAARALTDSVAGTEDGAPSSSRVFVVRRDQDIYIQTLRKLFNESHGIFMGLQRS
EEELAGKSRKAQLVQVSKNYRSVIRACMEDMHQAAVSTRDPALQGQYSTQVSILSAMELI
WNLCEILFVEAATAGPLLLRLLDWVRLHVCDVDSMVREVLSSESPSKHKLFWNVVDIFVL
QGRMDEARHLLSKEASANPASLNMYKILDDLMKKMPVPSLSNTQTLTELELKWQHWHEEC
QRYLQDGTFASNPHMESICKILLGDEDAILEKKELMTTWYHFLVTRLLYSHPTVKPMELR
FYAQSSMDLFLGGESSPEPLDMILMAAFEFEIHQVIKECSIVLSNWWFVAHLTDLLDHCK
LLQSHNLYFGSNMREFLLLEYASGLFSHHSLWQLGVDYFDHCPEYGRVYLELHIERIPLS
TEQKALKVLRICEQRQMHEQVRSVCKIMAMKALRNNRLGSALSWSIRAKDAAFATLISDR
FLKDYCERGCFSDLDLIDNLGPSMLLSDRLTFLGKYREFHRLYGEKRFPEAARLLLTLMT
AHIAPCSFWMTLLTDALPLLEQKEVIFSAEQTYELMRCLEDLTAGNPDKRKFQTPRQTLS
PAHHCVQSPNPGSAPFQDDEIETTKVEMLRLALARNLARVIVKEGTVEGS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaccggacgccgagccgccgctcgtggtggtgccgggcgcggactcgtcgtcc
cggcagctgtgcttcgcctggggccccgcggaggtgctggtgtgcgagaccctgttcagc
cgcgctggtgggtcccgctcccgattcctgtcccgctctccatgcccatcccgattctgc
ggtgagggcagggcgggcgctgctgcgcgggcgctgacggactctgtcgcaggtaccgag
gatggagcgccgagctcctctcgcgtcttcgtggtccgcagagatcaggacatttacatc
cagaccctgcggaaactcttcaacgagtcgcacgggattttcatggggctgcagcggagc
gaggaggagctggcggggaagtcgcggaaggcgcaattggttcaagtgagtaaaaactac
cggtcagtgataagagcctgcatggaggacatgcaccaggcagctgtttcgacccgggac
cctgccctgcaaggccagtacagcactcaggtttccattctctctgcaatggagctgata
tggaacctgtgtgagattctgtttgttgaagcagctacagctgggcccctcctgctgcgc
ctcctggactgggtgcggctccacgtgtgtgacgtggacagcatggtccgggaagttctg
agcagtgagagtccatccaaacacaagctcttctggaacgtggtggatatctttgtgctc
caaggccggatggacgaagcgcggcacctgctctccaaggaagccagcgccaatcccgca
tccctcaacatgtacaaaatcttggatgacttgatgaagaagatgcctgtgcccagtctt
agcaacacccagacactgacagagctggagctgaagtggcagcactggcacgaggaatgt
cagcggtatctacaggatggaacttttgcttccaatccccacatggagtccatctgcaag
atcctgctgggagacgaggatgccattttggagaagaaggagctcatgaccacgtggtat
cacttcctggtcacccggctcctctattcccacccaacggtgaagccgatggagctgcgg
ttctatgcacagtccagtatggacctgttcctgggtggagagagcagccctgagcctcta
gacatgattctaatggcagcctttgaatttgagatccatcaagtgatcaaggaatgcagc
attgtcctgagcaactggtggtttgtggctcatctgactgacctgttggatcactgcaaa
ctcctgcagtctcacaatctctattttggttcaaatatgcgtgaattcctcctgctggaa
tatgcctcaggactcttttcccatcacagcctgtggcagttgggggtggattacttcgac
cactgcccagagtacggccgggtgtacctggagctgcacatcgagcgcatcccgctcagc
acggagcagaaggccctcaaggtgctgaggatctgtgagcagaggcagatgcacgaacaa
gtgcgcagcgtctgtaagatcatggccatgaaggctctgcggaacaaccgcctgggctcc
gccctgtcctggagcatccgagccaaggacgcggcatttgccacgctcatctcagaccga
ttccttaaggactattgtgaaagggggtgtttctctgacctggacctcattgacaatctg
ggcccgtccatgctgctcagtgaccggctcacattccttgggaagtaccgggagttccac
cggctgtacggggagaagcggttcccggaggctgcgcggctgctgctgacgctgatgacg
gctcacatcgccccctgctccttctggatgacgctgctcacggacgcgctcccgctgctg
gagcagaaggaggtcatattttcagcagagcagacttatgagttgatgcgatgcctggaa
gacctgacagcaggaaatccagataagcggaaattccagaccccgagacagacgctgtca
ccagctcatcactgtgtgcagtcccctaacccaggctctgctcccttccaggatgatgag
attgagacaaccaaagtagaaatgctgagacttgctcttgcacggaacctcgcacgggtc
atcgtcaaagaaggcacagtggaagggtcttga
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