Hirundo rustica (Barn swallow): 120761097
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Entry
120761097 CDS
T09369
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03015
mRNA surveillance pathway
hrt05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120761097 (CPSF4L)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
120761097 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120761097 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120761097 (CPSF4L)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120761097 (CPSF4L)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120761097 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
120761097
NCBI-ProteinID:
XP_039937906
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All DBs
Position
18:complement(10826862..10830506)
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AA seq
313 aa
AA seq
DB search
MQHSGAAGAGSALPGEEEEGFGVLLGPRGGCRDLQSAVLPLESCVFLGERPCCPAPSPAC
AGLEQALPRAGTMQELVTGVEKIRFDSEADVEELRARPLPFPGVDGVQGHPRRGGAKPAV
CKHWLRGLCKRGDGCDFQHDYDASRMPECYFYSKFGECSDKDCPFPHVDATAGPVGCPWY
DRGFCRHGPLCKYKHTRRVMCVNYLVGFCPEGPKCKFVHLKAGLMTSSTDPSKEATCPWG
LAQRDLAAVEQRGGEDEPPEEPPARGAQRLAARLWDASGTQSLLEGGTCSKSGSVSPCAG
ESGRTPLEMLLGK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcagcactccggggctgctggggctggttctgctctgcctggggaggaggaggagggt
tttggagtgttgttggggccccggggtggctgcagggacctccagagcgcggtgctcccg
ttggagagctgtgttttccttggggagcgtccctgctgccctgccccttcccctgcctgt
gccgggctggagcaggctcttcccagagcagggacgatgcaggagctggtgactggcgtg
gagaagatcaggtttgactccgaggctgatgtggaggagctccgagctcggcccctgccc
ttcccgggggtggacggtgtgcagggccacccccggcgcggcggggccaagcccgcggtg
tgcaagcattggctgcgagggctctgcaagcggggcgacggctgcgacttccagcacgac
tacgacgccagcaggatgcccgagtgctatttctactccaagttcggtgagtgcagcgac
aaggactgtcccttcccgcacgtcgatgccaccgccggccccgtgggctgtccctggtac
gaccgtggcttctgcaggcacggtcccctgtgcaagtacaagcacacgaggagggtgatg
tgcgtcaactacctggtgggattctgcccggagggacccaagtgcaaattcgtgcacctc
aaggccgggctgatgaccagcagcacagacccgtccaaggaagccacgtgtccgtggggg
ctggcacagcgggatctggccgctgtagagcagaggggaggtgaggacgagccacccgag
gagccacctgctcgcggcgcccagcgcctggcagctcgtctgtgggacgccagtggcaca
cagagcctgctggaaggaggcacctgctccaagagcggatcagtcagcccctgtgccggt
gagagcgggaggactccgctggaaatgctgctgggaaagtga
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