Hirundo rustica (Barn swallow): 120761177
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Entry
120761177 CDS
T09369
Symbol
RFFL
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120761177 (RFFL)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120761177 (RFFL)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120761177 (RFFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
Prok-RING_4
FYVE_2
zf-C3HC4_2
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
120761177
NCBI-ProteinID:
XP_039938042
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All DBs
Position
19:complement(5716116..5744983)
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AA seq
379 aa
AA seq
DB search
MYYSALRVQRNHRFLGGTMWASCCNWFCVDGSPEEMQPPPAARAQAYSNPGFSSFPSPTA
SEQSCKACGVHFDSSSSKHICLDCKKNFCTSCSNQPEGGPLLCHLCQRFRATAFQREELI
KMKVKDLRDYLALHEISTEFCREKEDLVFLILGQQLAITQEDQIRTNTFNTSAPGQQDFV
SHPPANPASPTSHDESSVSADPISSSEAQEHQQANGHVPPSPACGTAAENAAEEAAAEDE
IESSDSEDNLVLGRKASLSDLTSVGDINALSVRQLKEILARNFVNYKGCCEKWELLERVT
RLYREKDLQHLVLDTDDQPGAAGPPSTEDNLCRICMDAAIDCVLLECGHMVTCTKCGKRM
SECPICRQYVIRAVHVFRT
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtactattctgcactgagagtacaaaggaatcacagatttttgggaggtaccatgtgg
gcgagctgctgtaactggttctgtgtggatggctcccccgaggagatgcagcctccgcca
gcggctcgagcccaggcctattccaaccccggcttcagctccttcccctctcccactgct
tctgaacagagctgcaaagcctgtggcgtgcacttcgacagctcctccagcaagcacatc
tgcctggactgtaagaagaacttttgcacgtcctgctcaaaccagcccgagggtgggccc
ctgctctgccacctctgccagcgcttccgagccacggcttttcagcgggaggagctgatc
aagatgaaggtgaaggatctgcgggattacttggcgctccatgagatttccacggagttc
tgtcgtgaaaaggaggacctggtattcctgatccttggccagcagcttgcaattacccag
gaagatcagataagaacaaacacatttaataccagtgcccctggacagcaagactttgtg
agtcaccccccagccaacccggcctctcctacctcacacgatgagtcctcagtgtctgca
gatcccatctcaagttcagaagctcaggaacaccaacaggccaatggtcacgtgcctccg
agcccagcctgtggaacagcagctgagaatgcagcagaagaagcagcagcagaggatgag
atagagtctagtgactccgaggataatctggtgctgggcaggaaggcctccctgtccgac
ctgacgagcgtcggggacatcaacgcgctctccgtgcggcagctgaaggaaatcctcgcc
cgcaacttcgtcaactacaaaggctgctgtgagaagtgggagctgctggagagggtcact
cgcctctacagagagaaggaccttcagcatctggttttggacaccgacgatcaacctggt
gctgcggggccccccagcacggaggacaacctgtgcaggatctgcatggacgctgccatc
gactgtgtgctgctggagtgtgggcacatggtgacgtgcaccaagtgcgggaagcgcatg
agcgagtgccccatctgccgccagtacgtcatcagggccgtgcacgtcttcaggacataa
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