Hirundo rustica (Barn swallow): 120761280
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Entry
120761280 CDS
T09369
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120761280 (VPS53)
Membrane trafficking [BR:
hrt04131
]
Protein recycling
Others
EARP complex
120761280 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
120761280 (VPS53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Sec8_N
O_Spanin_T7
GrpE
Laminin_II
Syndetin_C
hAT-like_RNase-H
COG3_N
NBD94
COG5_N
MCPsignal
FUSC
Snf7
Seryl_tRNA_N
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
120761280
NCBI-ProteinID:
XP_039938307
LinkDB
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Position
19:complement(2987848..3048927)
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AA seq
832 aa
AA seq
DB search
MEEDEPELEAGLEAALELAPAVQAAIEQVFPSQDPLDRADFNAVEYINALFPTEQSLANI
DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRTGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPAEWCMTERIAVEFCHVTRAELSKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGCTLTDGTVQKKPEVPPPSTNPFLEDETGAEADEIVMEKSDTDKPKKPKVPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNVDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKEKEGSE
VAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLMERINLTGEMDTFSVVISN
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKR
SEQSSMLDLFRLRLPAPPPGGDSAGSLSLSAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgagccggagctggaggccgggctggaggcggcgctggagctggcgccc
gccgtgcaggccgccatcgagcaggtatttcccagtcaagatccactggacagagcagat
ttcaatgctgtggagtatattaatgctctctttcccactgagcaatctttggcaaacatc
gatgaagtcgtgaacaagatcaggttgaaaataaggaggctggatgacaacattcgaact
gtggtgaggggacagaccaacgtgggacaggatggcaggcaggccttggaagaagcccag
aaagccattcaacagctcttcggtaaaattaaggatattaaagacaaggctgaaaaatct
gaacaaatggtgaaggagatcacccgggatatcaagcagctggaccatgccaagcgtcac
ctaaccacctccatcaccaccctcaaccacctccacatgctggcagggggcgtggattct
ctggaggctatgaccaggaggagacaatatggggaagtcgccaaccttctccaaggtgtc
gtgaatgtgttggagcacttcaacaagtacatggggatccctcagattcgacagctctct
gaaagggtgaaggcagcacagaatgagctggggcagcagatcctggctgacttcgaggaa
gcctttccttctcaaggtaccaagaggactggtgggcccagcaacgtcctacgtgatgcc
tgcctggtagccaacgtcctggatcccaggatcaaacaggaaatcatcaagaaatttatt
aaacaacacctctcggagtatctggtccttttccaggaaaatcaagatgtggcctggctg
gataagatcgaccggcgctacgcttggatcaagaggcagctggtggattacgaggagaag
tacgggcgcatgttccccgcggagtggtgcatgacggagcgcatcgccgtggagttctgc
cacgtcaccagggcagagctctctaagatcatgcgcacgagggcgaaggagatcgaggtg
aagctgcttttgtttgcaattcagagaacaaccaacttcgaagggctcctggccaagcgc
ttctcaggctgcactcttactgatggcacagtgcagaagaagccagaagtgccacctccc
tccaccaacccttttctggaggatgaaactggggcagaggcagatgagattgtgatggag
aaaagtgatacggacaaaccaaagaagccaaaagtccctgacaatcctttccatggcatt
gtttccaagtgctttgagcctcacctctacgtgtatatcgagtcccaggacaagaatctg
ggcgagctgattgacaggtttgtggctgacttcaaggctcagggtccccccaagcccaac
gtggacgaaggaggagccgtcctgcccagctgtgctgacctctttgtgtactacaagaag
tgcatggtgcagtgctcccagctcagcactggcgagcccatgatcgccctgaccaccatc
ttccagaagtacctgcgggaatacgcctggaagattctctctggaaacctgcccaagacc
accagcagcagtggtgggctcaccatcacaagtttgctgaaagaaaaggaaggctctgaa
gtggcaaagtttactttagaagaactctgcctcatttgcagcatcctaagtactgcagag
tattgcctggccaccacccagcagttggaagagaagctcaaagaaaaagtggacgcgagc
ctaatggagagaatcaacctgacaggagagatggacactttcagcgttgtgatctccaac
agcatccagctgttagtgcaggacctggatgcagcctgtgaccctgccctgactgctatg
agcaagatgcagtggcagaacgtggaacacgtcggtgaccagagtccttatgtcacctca
gtcatcctccacatcaaacagaatgtccccatcatccgtgacaacctggcctccaccagg
aagtatttcactcagttctgcataaaatttgcgaactccttcattcccaagttcattaac
catctcttcaagtgcaaaccgatcagcatggtgggtgcagaacagctgctgctggacact
cactctctgaagatggttctcctggatctgccctccattgggtcccaagtggtgaggaag
gctcctgccagctacacaaagatagtggtgaaaggcatgactcgggctgaaatgatcctg
aaggtggtgatggctccacatgagcccccagttgtgtttgtggacaattacatcaagctg
ctcgctgactgcagcaccgacacattccagaagatcctcgacatgaagggcctgaagagg
agcgagcagagcagcatgttggaccttttccgcctgcgcctccccgctcctcctcccggc
ggggacagcgccggctccctctcgctgagcgctcccacgcccgagcaggaatcctctcgg
atacgcaaactggagaaactcatcaagaagagactctga
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