Hirundo rustica (Barn swallow): 120761306
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Entry
120761306 CDS
T09369
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrt03009
]
120761306 (DDX52)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120761306 (DDX52)
Ribosome biogenesis [BR:
hrt03009
]
Eukaryotic type
90S particles
Helicases
120761306 (DDX52)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120761306
NCBI-ProteinID:
XP_039938362
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Position
19:1225151..1231127
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AA seq
615 aa
AA seq
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METHELFRRLGAGARFDVRRFGLDARRFGVVKENRGSVSLENLDFFGKKEGTPQASAEEG
WGLTGAEEEVKQQVDGAGKNDGKRKRTAESSEGKRKKKKTRGSVSMPELSEDNGIKWMSS
TEAKFEVEKDKKPTAEKLERLRREKINRFRNQHRINVQGTDLPDPIATFDQLQKEYKVHP
KVMENIQAAGFHIPTPIQMQAIPIMLHGRELLASAPTGSGKTLAFCIPLLTHLKQPRNKG
FRALIISPTRELASQTHRELVKLAEGTGFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPN
RLIYLLKEDPPAIDLSSVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSHLVRRALFSA
TFAHDVEEWCKLNLDNVVLVSVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFAPP
VLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQRDKVVQSFRAGKIWVLICSALLAR
GIDFKGVNMVINYDLPTSAVEYIHRIGRTGRAGHRGKAVTFFTEDDKPLLRSIANVIQRA
GCPVPEYIKHLPKLQSKQKKKFIKKPLTRESICTTPKCFLKKGRRKMKTTKENTKGKKKG
KEGQKGGKLQTASES
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagacccacgagctcttccggcgcttgggtgccggggctcgcttcgacgtgcggcgc
ttcgggctggacgcgcggcgcttcggggtggttaaagagaaccgcggcagcgtctcgctg
gagaacctcgacttcttcgggaaaaaggagggaacccctcaggcatctgccgaggagggc
tgggggctcacaggggctgaagaggaggtgaagcagcaggtagatggagctgggaaaaac
gatggaaagaggaaaagaacggcagaaagcagtgaagggaaaagaaaaaagaaaaagaca
cgagggtcagtatcaatgccagagctgtcagaagacaatggaataaagtggatgtcctct
acggaagcaaaatttgaagttgaaaaagacaaaaaacccactgcagagaagcttgaacgc
ttgaggagagaaaagataaatcgcttcaggaaccagcacaggatcaacgttcagggaaca
gatctccctgaccccattgccacctttgatcagcttcagaaggagtacaaagtccaccct
aaagtcatggagaatatccaggctgcgggtttccacatcccaacaccgatccagatgcag
gcgattcccatcatgctgcatggtcgggagcttctggcttcagctcctacagggtctgga
aaaacgctggcattttgtatccctctcttaacacatctgaaacaacccaggaacaaaggg
ttcagggctctgatcatatcacccacccgagaacttgccagccagacccaccgggagctg
gtgaagctggctgagggcacgggcttcagaatccacatgatccacaaggcagctgaggca
gccaagaagtttgggcccaagtcttccaagaaatttgatatactggtcaccactcccaac
agactcatttatttgctgaaagaagatcctccagcgatagacttgagcagcgtggagtgg
ctggtggtggatgagtcagacaagctgtttgaggatgggaagtcaggattccgggaccag
ctggcttccatcttcctggcatgcacctcccacctggtcaggagggccctgttcagcgct
acctttgcccacgacgtggaggagtggtgtaagctcaacctggacaacgttgtgctggtg
tctgttggagcaagaaactctgcagcggagacagtagaacaagagctgctgtttgttgga
tctgagacaggaaaacttacggcgatgagagagcttgttaaaaagggttttgctcctcca
gtccttgtttttgtacagtctattgagagagctaaagagcttttccatgagcttatttat
gaaggcatcaatgtggatgtcatccatgcagacaagactcagcaacagagagacaaagta
gtgcagagtttcagagctgggaagatctgggtgctcatctgctcagcgttactggctcga
gggattgacttcaaaggtgtgaatatggtcatcaattacgatttgccaacgagtgcagtg
gaatacatccacaggataggtcgtactggaagagcaggacacagaggaaaggcagtcact
ttctttacagaagatgacaaacctttattacggagtattgccaatgttatccagcgagct
ggctgtcctgtgccagaatacataaaacatttgcccaaactgcagagcaaacaaaagaag
aaattcattaagaaacctttgacaagagaatccatttgtaccaccccgaagtgcttcttg
aaaaaaggcagaagaaaaatgaaaactacaaaggaaaatactaagggaaagaagaaaggt
aaagaaggccaaaagggcggtaaattacagactgcttcagaaagctga
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